Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,644,697 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,644,6970GC99.6% 535.4 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (120/106);  total (121/107)
Fisher's exact test for biased strand distribution p-value = 4.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,644,6980CG99.6% 536.5 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (120/107);  total (121/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,644,6990TA99.6% 541.8 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (121/105);  minor base G (0/1);  total (121/107)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 228 total aligned reads displayed.

GTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGGCTCGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCTTTTTGCGCTACG  >  CP042583/1644418‑1644978
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
  ttGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTg                                                                                                                                                                                                                                                                                 <  2:1530531/288‑1 (MQ=255)
                aattgcgaaagaacaagaacGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAAc                                                                                                                                                                                                                                                                  <  1:2008675/281‑1 (MQ=255)
                      gaaagaacaagcacGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTAACGCAGTTGCGTCAATAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAAttt                                                                                                                                                                                                                                                            <  2:1584514/287‑1 (MQ=255)
                      gaaagaacaagaacGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAAtt                                                                                                                                                                                                                                                             <  2:342092/286‑1 (MQ=255)
                                  acGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCatgatg                                                                                                                                                                                                                                                  <  2:2048403/287‑1 (MQ=255)
                                             ggCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATAtttt                                                                                                                                                                                                                                     <  1:1205561/289‑1 (MQ=255)
                                              gCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGATTATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTTGGTATAACGCATTTTACCATGATGCTGCGGATAtttt                                                                                                                                                                                                                                     >  2:630812/1‑288 (MQ=255)
                                                    tCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATCGGCTTGCACATCACCACGCCACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGTCTATTTTTCCAGCa                                                                                                                                                                                                                              >  2:729353/1‑289 (MQ=255)
                                                    tCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGc                                                                                                                                                                                                                               <  1:1646536/288‑1 (MQ=255)
                                                        gAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAAc                                                                                                                                                                                                                            >  2:1085671/1‑287 (MQ=255)
                                                              caACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTACTTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTggg                                                                                                                                                                                                                                                                        >  1:1777465/1‑237 (MQ=255)
                                                              caACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAAt                                                                                                                                                                                                                                                              <  1:1682266/247‑1 (MQ=255)
                                                              caACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATa                                                                                                                                                                                                                    >  1:1889091/1‑289 (MQ=255)
                                                              caACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATa                                                                                                                                                                                                                    >  1:390222/1‑289 (MQ=255)
                                                                aCATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAgg                                                                                                                                                                                                                  <  2:556327/289‑1 (MQ=255)
                                                                aCATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAg                                                                                                                                                                                                                   >  1:994812/1‑288 (MQ=255)
                                                                   tACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGCTATTTTTCCATCATCGCTTCATAGGCga                                                                                                                                                                                                               >  2:1244565/1‑289 (MQ=255)
                                                                   tACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCga                                                                                                                                                                                                               >  1:2034775/1‑289 (MQ=255)
                                                                      tctTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGaa                                                                                                                                                                                                            >  1:2245253/1‑289 (MQ=255)
                                                                           tGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAg                                                                                                                                                                                                                   >  2:1736510/1‑277 (MQ=255)
                                                                           tGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAg                                                                                                                                                                                                                   <  1:1736510/277‑1 (MQ=255)
                                                                           tGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAAc                                                                                                                                                                                                         >  1:367075/1‑287 (MQ=255)
                                                                           tGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGc                                                                                                                                                                                                       <  1:1085671/289‑1 (MQ=255)
                                                                             cTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGc                                                                                                                                                                                                       >  1:774772/1‑287 (MQ=255)
                                                                                ccAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTg                                                                                                                                                                                                   >  2:769007/1‑288 (MQ=255)
                                                                                     ttCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCaa                                                                                                                                                                                               <  1:1004488/287‑1 (MQ=255)
                                                                                     ttCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCa                                                                                                                                                                                                <  2:1376367/286‑1 (MQ=255)
                                                                                             gTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGaa                                                                                                                                                                                     <  1:525526/289‑1 (MQ=255)
                                                                                             gTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGaa                                                                                                                                                                                     <  2:924597/289‑1 (MQ=255)
                                                                                                    aGTGGCGTCACTAAGCCCACGTCAGAGTAGAGGAATATTTTCATCAGTAATTTACGGTCAAGATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATAGCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATcc                                                                                                                                                                               <  2:386997/288‑1 (MQ=255)
                                                                                                        gCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCg                                                                                                                                                                          >  1:1159917/1‑289 (MQ=255)
                                                                                                        gCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCAAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCg                                                                                                                                                                          >  1:1711651/1‑289 (MQ=255)
                                                                                                            cACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCg                                                                                                                                                                      <  1:1582049/289‑1 (MQ=255)
                                                                                                                aaGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAGTATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAg                                                                                                                                                                  >  1:2085164/1‑289 (MQ=255)
                                                                                                                aaGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAATCTTTGGAATAATCCAGCCGTTCGACAg                                                                                                                                                                  >  1:1375532/1‑289 (MQ=255)
                                                                                                                    ccACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGaa                                                                                                                                                                <  1:2182420/287‑1 (MQ=255)
                                                                                                                     cACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAg                                                                                                                                                             <  2:1567298/289‑1 (MQ=255)
                                                                                                                       cGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCa                                                                                                                                                                                                                      >  1:723373/1‑230 (MQ=255)
                                                                                                                       cGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAg                                                                                                                                                                             >  2:711265/1‑271 (MQ=255)
                                                                                                                             agTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTg                                                                                                                                                     >  1:1508428/1‑289 (MQ=255)
                                                                                                                             agTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTg                                                                                                                                                     >  1:1634868/1‑289 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCTAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCTAGCAACGCTTCATAGGCGAGAAAACGCTATGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGt                                                                                                                                                >  1:1556913/1‑289 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTgg                                                                                                                                                                                                                                                                         <  2:505465/168‑1 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTgg                                                                                                                                                                                                                                                                         >  1:505465/1‑168 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAg                                                                                                                                                                                                                                <  1:935084/209‑1 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTTGAATAATCCAGCCGTTCGACAGAAACGATAATTTGTACGt                                                                                                                                                >  2:2080709/1‑289 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGt                                                                                                                                                >  2:934089/1‑289 (MQ=255)
                                                                                                                                  cGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGt                                                                                                                                                >  1:2127698/1‑289 (MQ=255)
                                                                                                                                       tatTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTc                                                                                                                                           >  1:832491/1‑289 (MQ=255)
                                                                                                                                           ttCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGtt                                                                                                                                       <  2:2034775/289‑1 (MQ=255)
                                                                                                                                                caGGAATTTACGGTCAAAATCCTGATTCAAATAATAAAGCGGCGTCCATCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCt                                                                                                                                  <  1:971439/289‑1 (MQ=255)
                                                                                                                                                             tCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCa                                                                                                                     >  1:1973477/1‑289 (MQ=255)
                                                                                                                                                             tCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGCCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCa                                                                                                                     >  1:192206/1‑289 (MQ=255)
                                                                                                                                                              cAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCa                                                                                                                     <  2:1929156/288‑1 (MQ=255)
                                                                                                                                                                 aaTGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCGTTAAGTTGCGCCAGttt                                                                                                                 >  1:52139/1‑289 (MQ=255)
                                                                                                                                                                    gCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTgg                                                                                                              <  1:279518/289‑1 (MQ=255)
                                                                                                                                                                      tGATTCAAATAATACAGCGGCGTCCACCCTAATTGCCCGTATTTAGCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGTAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTggc                                                                                                             <  2:369610/288‑1 (MQ=255)
                                                                                                                                                                       gATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTggcg                                                                                                            >  1:249617/1‑288 (MQ=255)
                                                                                                                                                                       gATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTggcg                                                                                                            >  2:1852186/1‑288 (MQ=255)
                                                                                                                                                                                 ataaAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCg                                                                                                 <  2:856277/289‑1 (MQ=255)
                                                                                                                                                                                       cggcgTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAg                                                                                             >  1:1435757/1‑287 (MQ=255)
                                                                                                                                                                                            tCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGAc                                                                                                                                                                    <  1:186082/211‑1 (MQ=255)
                                                                                                                                                                                                      ttGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTAtttct                                                                            >  1:302886/1‑289 (MQ=255)
                                                                                                                                                                                                      ttGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTAtttct                                                                            >  1:673360/1‑289 (MQ=255)
                                                                                                                                                                                                                 tACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAAt                                                                 <  2:1973477/289‑1 (MQ=255)
                                                                                                                                                                                                                 tACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAAt                                                                 >  1:1733485/1‑289 (MQ=255)
                                                                                                                                                                                                                      ttAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGa                                                            <  2:1049122/289‑1 (MQ=255)
                                                                                                                                                                                                                       tAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTTCCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCg                                                             <  2:166006/287‑1 (MQ=255)
                                                                                                                                                                                                                       tAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGa                                                            >  2:964434/1‑288 (MQ=255)
                                                                                                                                                                                                                       tAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAG‑AAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATc                                                          <  2:144962/289‑1 (MQ=255)
                                                                                                                                                                                                                        aaTTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGAc                                                                                                                                                                    <  1:1100063/183‑1 (MQ=255)
                                                                                                                                                                                                                        aaTTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGAc                                                                                                                                                                    >  2:1100063/1‑183 (MQ=255)
                                                                                                                                                                                                                             gTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAACAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTa                                                     <  2:249617/289‑1 (MQ=255)
                                                                                                                                                                                                                              tCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAg                                                    >  2:1791958/1‑289 (MQ=255)
                                                                                                                                                                                                                              tCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAg                                                    >  2:1274986/1‑289 (MQ=255)
                                                                                                                                                                                                                                cAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAg                                                    >  1:1624230/1‑287 (MQ=255)
                                                                                                                                                                                                                                      cATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGt                                            <  2:2127698/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ttttCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTc                                          >  1:152500/1‑289 (MQ=255)
                                                                                                                                                                                                                                                cTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCt                                  >  1:481581/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 tgatgaCGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCt                                  <  2:218012/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 tgatgaCGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCt                                  <  2:1159917/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 tgatgaCGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCt                                  <  1:1791958/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     gaggAATATCCGGATAGGCTTGAACATCACCACGGGCCGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATAGTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGcc                             <  2:2215787/286‑1 (MQ=255)
                                                                                                                                                                                                                                                          atatCCTTAGTGGCTTGACCACCACCACGCGATGTTGGTTCAATCTGTGTATAACGAATTTTACCAGGATGCTGCGGATATTTTTCCAGGAACGCTTCTTAGGCGAGAAAACGCTCTGGCAAACATTTGGAATAATCCAGCCGTTCAACAGAAAAGTTTTTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGGGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAgg                        <  2:1388755/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          atatCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAgg                        <  1:1117625/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAg                         >  1:214719/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                 gATAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATg                 <  1:1829442/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aTAGGCTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGcc                             <  2:1680795/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTAtttcttt                                                                          >  1:644120/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                       cTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGcc                             >  2:1128608/1‑271 (MQ=255)
                                                                                                                                                                                                                                                                       cTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGcc                             <  1:1128608/271‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cTTGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCtttt           >  1:1184141/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        ttGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGGATGGCttttt          >  1:602244/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tGCACATCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTg                                                                                                      >  2:1618204/1‑196 (MQ=255)
                                                                                                                                                                                                                                                                             caTCACCACGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCTTTTTGCGCt     <  1:905377/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                caccacGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCa                                                                                                                                                                                                >  1:756959/1‑99 (MQ=255)
                                                                                                                                                                                                                                                                                caccacGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCg                                                             >  1:1276529/1‑230 (MQ=255)
                                                                                                                                                                                                                                                                                caccacGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCttttt          >  1:2175796/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                                caccacGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCttttt          <  2:2175796/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                                caccacGCGACGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCTTTTTGCGCTACg  >  1:2036923/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                       
GTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGGCTCGTTGGTGCAATCTGGGTATAACGAATTTTACCATGATGCTGCGGATATTTTTCCAGCAACGCTTCATAGGCGAGAAAACGCTCTGGCAAACCTTTGGAATAATCCAGCCGTTCGACAGAAAAGATATTTTGTACGTTTTTCAGTTCCGCTTTAAGTTGCGCCAGTTTTGGCGGCAGTGGCCCGGCAGCCTGTTTGGCTATTTCTTTCGGTTCAATGCCGATCGGGTAGACTTCTGTTCGAAATGCTTTGCCCCAGGCTGTATGGCTTTTTGCGCTACG  >  CP042583/1644418‑1644978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A