Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,660,738 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,660,7380GC100.0% 488.3 / NA 204intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (96/108);  total (96/108)
*CP0425831,660,7390CG99.0% 478.5 / ‑1.5 204intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (95/107);  minor base T (1/1);  total (96/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01
*CP0425831,660,7400TA99.5% 484.2 / NA 204intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (96/107);  total (96/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 204 total aligned reads displayed.

AAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAAGCTATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTG  >  CP042583/1660462‑1661018
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
             cccgggtcccGGTTTGGCAGCGTTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCCCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCAATCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGGGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAgctgc                                                                                                                                                                                                                                                                  <  2:7641/281‑1 (MQ=255)
               cAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTAc                                                                                                                                                                                                                                                                           <  2:601657/277‑1 (MQ=255)
                               agcaTTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGACTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAAtt                                                                                                                                                                                                                                                <  1:1573169/288‑1 (MQ=255)
                                  aTTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCa                                                                                                                                                                                                                                             <  1:1969776/288‑1 (MQ=255)
                                            gAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGAcc                                                                                                                                                                                                                                    >  2:2073955/1‑287 (MQ=255)
                                            gAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGAcc                                                                                                                                                                                                                                    >  2:2037784/1‑287 (MQ=255)
                                             aGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACctct                                                                                                                                                                                                                                 >  2:451416/1‑289 (MQ=255)
                                             aGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACctct                                                                                                                                                                                                                                 >  1:158672/1‑289 (MQ=255)
                                             aGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACctct                                                                                                                                                                                                                                 >  2:1838178/1‑289 (MQ=255)
                                                       cggcgTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAAtt                                                                                                                                                                                                                                                <  1:283006/264‑1 (MQ=255)
                                                       cggcgTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTg                                                                                                                                                                                                                             >  2:627242/1‑283 (MQ=255)
                                                       cggcgTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTg                                                                                                                                                                                                                             <  1:627242/283‑1 (MQ=255)
                                                       cggcgTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGtc                                                                                                                                                                                                                        >  1:827171/1‑288 (MQ=255)
                                                       cggcgTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGtc                                                                                                                                                                                                                        >  1:1154166/1‑288 (MQ=255)
                                                           gTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCa                                                                                                                                                                                                                    <  2:827171/288‑1 (MQ=255)
                                                                      gggcgcgcgGCTTCCCATAACGGCTGTGCTTCGCTAAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTAAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  2:131608/286‑1 (MQ=255)
                                                                      gcgggcgcGGCTTCCCCTAACGGCTGTGCTTCGCTGAATAAGTCCTCATTCCTCATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  2:797299/288‑1 (MQ=255)
                                                                      gcgcgcgcGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGGGCCTGAAGCTCAATTTCATGGTAGACCTCTTCGGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  2:946128/288‑1 (MQ=255)
                                                                      gcgcgcgcGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  2:1393238/288‑1 (MQ=255)
                                                                      gcgcgcgcGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  1:1614388/288‑1 (MQ=255)
                                                                      gcgcgcgcGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAAc                                                                                                                                                                                                        >  1:2134283/1‑289 (MQ=255)
                                                                       cgcgcgcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACct                                                                                                                                                                                                                                   <  2:1922402/261‑1 (MQ=255)
                                                                       cgcgcgcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACct                                                                                                                                                                                                                                   >  1:1922402/1‑261 (MQ=255)
                                                                           cgcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCg                                                                                                                                                                                                                           >  2:361826/1‑265 (MQ=255)
                                                                           cgcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCaa                                                                                                                                                                                                    >  2:1241694/1‑288 (MQ=255)
                                                                            gcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGTGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACa                                                                                                                                                                                                  <  1:1838178/289‑1 (MQ=255)
                                                                            gcgGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACa                                                                                                                                                                                                  <  1:163606/289‑1 (MQ=255)
                                                                                          cGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCAt                                                                                                                                                                                              <  1:352305/279‑1 (MQ=255)
                                                                                             cTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATgg                                                                                                                                                                                                                                          <  2:497873/232‑1 (MQ=255)
                                                                                             cTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         >  1:617272/1‑265 (MQ=255)
                                                                                              tgtgCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGATAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGAc                                                                                                                                                                                                                                     >  1:207240/1‑236 (MQ=255)
                                                                                               gtgCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         <  1:772815/263‑1 (MQ=255)
                                                                                                tgCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTg                                                                                                                                                                              >  1:1808055/1‑289 (MQ=255)
                                                                                                  cTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGaa                                                                                                                                                                            >  2:322199/1‑289 (MQ=255)
                                                                                                       cTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGaaaaaa                                                                                                                                                                        >  1:2018811/1‑288 (MQ=255)
                                                                                                         gAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATcc                                                                                                                                                                     <  2:217347/289‑1 (MQ=255)
                                                                                                            tAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACAAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaa                                                                                                                                                                                                           >  2:1431462/1‑248 (MQ=255)
                                                                                                              aGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATc                                                                                                                                                                <  2:158672/289‑1 (MQ=255)
                                                                                                              aGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATc                                                                                                                                                                <  2:1154166/289‑1 (MQ=255)
                                                                                                                tcatcaTTCCACATGAAATGGCCCTGACTAAAGTTTTCAGGGTTACGAACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCt                                                                                                                                                              <  2:1808055/289‑1 (MQ=255)
                                                                                                                  atcatTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACTAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTg                                                                                                                                                                                                                             >  2:620112/1‑224 (MQ=255)
                                                                                                                  atcatTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGc                                                                                                                                                            >  2:1998448/1‑289 (MQ=255)
                                                                                                                   tgatTCCACATTAAATAGCCCTGAGTAACGTATACATGGTTCAGCGCAGGATCAATGGCGTGAAAGTTTGTTGCCTGATAATAACTAACACATGCCTCAGGATACATGGTGTAAAAAGCCGATTTAGGTCGAGTGAATGGTACCGGATGGCGGACACAGACCGAATAGTAATCGTACTCCAGCTGGTGAGCCTGAAGCTCAATTTCATGGTAGCCCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGCCGCCAGCTGAAAAAATCCTTATCCTGCa                                                                                                                                                           <  2:2082644/287‑1 (MQ=255)
                                                                                                                    catTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCAt                                                                                                                                                          >  1:1773665/1‑289 (MQ=255)
                                                                                                                    catTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCAt                                                                                                                                                          >  2:862448/1‑289 (MQ=255)
                                                                                                                           caTTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAAc                                                                                                                                                   <  2:789153/289‑1 (MQ=255)
                                                                                                                              tAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGaaaa                                                                                                                                                                          <  1:229679/263‑1 (MQ=255)
                                                                                                                              tAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGaaaa                                                                                                                                                                          >  2:229679/1‑263 (MQ=255)
                                                                                                                              tAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGc                                                                                                                                                >  1:510088/1‑289 (MQ=255)
                                                                                                                               aaaTGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCa                                                                                                                                               <  2:1035823/289‑1 (MQ=255)
                                                                                                                               aaaTGGCACTGACTAAAGTTTTCAGGGTTCAGCACCGAATCAATTGCGAGAAAGTGTTTTGCCTGATAATAACTAACCCACGCCCCAGGGTAATTGGTGTAAAATGCCACTTTAGGTCGGGTGAATGGTACCTGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCGCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTACACCGCa                                                                                                                                               <  2:923203/289‑1 (MQ=255)
                                                                                                                                 aTGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCaa                                                                                                                                              >  2:1793131/1‑288 (MQ=255)
                                                                                                                                  tGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACg                                                                                                                                            <  1:1193860/289‑1 (MQ=255)
                                                                                                                                     cccTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTTTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTTTTCTGCGGTCTTCATCCTCCGAAAACGCAACAGCATCGTGCAACGCTAGTAGAAAACATCCTTATACGGAAGATTAAACCGCAACGcc                                                                                                                                          >  2:745001/1‑288 (MQ=255)
                                                                                                                                     cccTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATc                                                                                                                                                                <  2:2124720/266‑1 (MQ=255)
                                                                                                                                     cccTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGcc                                                                                                                                          >  2:443964/1‑288 (MQ=255)
                                                                                                                                     cccTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCCCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATa                                                                                                                                                         >  1:477140/1‑273 (MQ=255)
                                                                                                                                             aaaGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagt                                                                                                                                 <  1:892903/289‑1 (MQ=255)
                                                                                                                                               aGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTTCGACCCCAGCTGAACACATCCTTATCCTGCATCATAAACCTCAACGCCCCTGacagcaa                                                                                                                               >  2:1673498/1‑286 (MQ=255)
                                                                                                                                                  tttCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagtgagt                                                                                                                             <  2:1773665/288‑1 (MQ=255)
                                                                                                                                                  gttgaGGGGTCAGGACCGGATCGATTGCGAGGAAGTTTGTGGCCGGATGATAGCTAACCCGGGCCGCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGGTGCTGGGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagtgagt                                                                                                                             <  2:1221534/284‑1 (MQ=255)
                                                                                                                                                    tCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATcc                                                                                                                                                                     <  1:792878/246‑1 (MQ=255)
                                                                                                                                                    tCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATc                                                                                                                          >  2:1942432/1‑289 (MQ=255)
                                                                                                                                                    tCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAAT‑GTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCa                                                                                                                         <  2:895126/289‑1 (MQ=255)
                                                                                                                                                             aGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTtat                                                                                                                    >  1:1040137/1‑286 (MQ=255)
                                                                                                                                                               cacaGGATAAATTGCGAGAAAGTTTTTTGCCTGATAATCACTAACCCACGCCTCAGGGTAATTGGTTTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATCGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGa                                                                                                               <  1:1034768/289‑1 (MQ=255)
                                                                                                                                                                    gATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCg                                                                                                                                                                                                                                                                              >  1:1327452/1‑125 (MQ=255)
                                                                                                                                                                    gATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTg                                                                                                                                                                                                                             <  2:185152/174‑1 (MQ=255)
                                                                                                                                                                    gATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAAtt                                                                                                          >  2:1630367/1‑289 (MQ=255)
                                                                                                                                                                    gATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAAtt                                                                                                          >  2:489490/1‑289 (MQ=255)
                                                                                                                                                                    gATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAAt                                                                                                           >  1:1227718/1‑288 (MQ=255)
                                                                                                                                                                        aaTTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCaaa                                                                                                      <  1:451416/289‑1 (MQ=255)
                                                                                                                                                                        aaTTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCaaa                                                                                                      <  1:443964/289‑1 (MQ=255)
                                                                                                                                                                        aaTTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCaaa                                                                                                      <  1:494489/289‑1 (MQ=255)
                                                                                                                                                                        aaTTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCaaa                                                                                                      <  1:981366/289‑1 (MQ=255)
                                                                                                                                                                              gagaAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagt                                                                                                                                 >  1:1088875/1‑256 (MQ=255)
                                                                                                                                                                              gagaAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagt                                                                                                                                 <  2:1088875/256‑1 (MQ=255)
                                                                                                                                                                              gagaAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTCATAATGATAATTCAAACTATca                                                                                                <  1:1793131/289‑1 (MQ=255)
                                                                                                                                                                                gaAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATcac                                                                                               <  1:1450290/288‑1 (MQ=255)
                                                                                                                                                                                     ttttttGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagt                                                                                                                                 >  2:1377604/1‑249 (MQ=255)
                                                                                                                                                                                     ttttttGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagt                                                                                                                                 <  1:1377604/249‑1 (MQ=255)
                                                                                                                                                                                                               cGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATcc                                                                                                                                                                     >  1:1856297/1‑187 (MQ=255)
                                                                                                                                                                                                               cGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCa                                                                                                                                               <  1:2113094/209‑1 (MQ=255)
                                                                                                                                                                                                                        gTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCa                                                         <  1:2058471/286‑1 (MQ=255)
                                                                                                                                                                                                                            ttGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATa                                                                                                                                                         >  1:1552190/1‑186 (MQ=255)
                                                                                                                                                                                                                            ttGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATa                                                                                                                                                         <  2:1552190/186‑1 (MQ=255)
                                                                                                                                                                                                                            ttGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCGGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAAtt                                                  >  2:1730303/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gtAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGaaaa                                                                                                                                                                                                         >  1:419951/1‑133 (MQ=255)
                                                                                                                                                                                                                                 gtAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATcc                                                                                                                                                                     <  1:1723091/169‑1 (MQ=255)
                                                                                                                                                                                                                                 gtAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACttt                                             >  1:1423354/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gtAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACttt                                             >  1:1393287/1‑289 (MQ=255)
                                                                                                                                                                                                                                     aaaGCAACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCa                                         <  1:948892/289‑1 (MQ=255)
                                                                                                                                                                                                                                         ccACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGcc                                     >  2:1405050/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ttAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGc                                <  1:2170572/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      aGTGAATGGTACCGGGTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAgagtga                                                                                                                               <  2:572672/186‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ggTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGCCCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCACCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATgtt          >  2:215015/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                    ggTGGCGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGa                                                                                                               <  1:576902/188‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTAt      >  1:1210868/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         cGGACACATAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATg     >  2:160977/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cacaTAACGAATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTg  <  1:2189879/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                      
AAAGGACAAAAAGCCCAGCGCCCGGTTTGGCAGCATTAAATACTGAGTGACACCGCGGCGTAAACCATGTGCGCGCGCGGCTTCCCATAACGGCTGTGCTTCGCTGAATAAGTCATCATTCCACATTAAATGGCCCTGACTAAAGTTTTCAGGGTTCAGCACCGGATCAATTGCGAGAAAGTTTTTTGCCTGATAATAACTAACCCACGCCTCAGGGTAATTGGTGTAAAAAGCCACTTTAGGTCGAGTGAATGGTACCGGGTGGCGGACACATAAGCTATAGTAATCGTACTCCAGCTGCTGAGCCTGAAGCTCAATTTCATGGTAGACCTCTTCTGCGGTCTCCATCCTCTGAAAACGCAACAGCATCGTGCGACGCCAGCTGAAAAAATCCTTATCCTGCATAGTAAACCGCAACGCCCCTGAGAGTGAGTATCATTTATAATGATAATTCAAACTATCACATAAATAAGATTTATATATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTG  >  CP042583/1660462‑1661018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A