Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 699,012 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583699,0120AT99.2% 888.1 / NA 381intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (198/178);  minor base C (3/0);  total (201/180)
Fisher's exact test for biased strand distribution p-value = 2.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583699,0130GC99.5% 906.5 / NA 381intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (199/179);  minor base A (1/1);  total (201/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583699,0140CG99.5% 902.9 / NA 381intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (200/179);  total (201/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 381 total aligned reads displayed.

GCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATT  >  CP042583/698732‑699292
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
                         gAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGa                                                                                                                                                                                                                                                                           <  2:1236813/271‑1 (MQ=255)
                                 tGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGGTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTTCTGGCAGCAGACGGATTCCCGAATCGCTGAACATCCAGATTGCGTACTGCCCTGTGGCTACGGGt                                                                                                                                                                                                                                                 >  2:3041790/1‑289 (MQ=255)
                                     cgcgTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAg                                                                                                                                                                                                                                             <  2:813902/289‑1 (MQ=255)
                                        gTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCgg                                                                                                                                                                                                                                          <  1:1668980/289‑1 (MQ=255)
                                         tCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCGGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAAAAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGGGGAGTGGCCGTTGCCTTACTGGGAGCGGAACGATTCCCGAACCGCTGAAAATCCAAAGGGATTTCTGCCGTGTGGCGACGGGTGGAggggg                                                                                                                                                                                                                                         >  2:142402/1‑288 (MQ=255)
                                                    tttggggattccggcggGCGGCCTCTACTATGGCATGGGACTGAAGGAGATGTGAATGCTATGCCACAGCGCTGCCGGCAGTTCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAATTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCg                                                                                                                                                                                                                              <  2:1062507/278‑1 (MQ=255)
                                                    tttAGCGATATCGGCGGGCGGGCGCCACTAATGCATGGTACTGAAGGTGAAGGGTATGCTAATCCGCAGCGCTGCCCGCAGAACAATCTCATTGAACGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGGGGATTGAGCGTTGCCTTGCTGGTAGCGAAGCGATTCCCGAATCGCTGAAAATCCAGTTGGCTTGCTGCCTGGTGGGCAGGGGGGAAGGGGCGACTAttcgcg                                                                                                                                                                                                                              >  1:1062507/1‑284 (MQ=255)
                                                      tAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATTGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATTAGCggc                                                                                                                                                                                                                            >  1:2716263/1‑287 (MQ=255)
                                                                    ggcgggcgCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGcgcgcg                                                                                                                                                                                                               <  1:2921719/288‑1 (MQ=255)
                                                                           gcTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAg                                                                                                                                                                                                       >  1:394268/1‑289 (MQ=255)
                                                                            ctactaATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAgg                                                                                                                                                                                                      >  2:2983731/1‑289 (MQ=255)
                                                                               ctaATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCAt                                                                                                                                                                                                   >  1:615628/1‑289 (MQ=255)
                                                                               ctaATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCAt                                                                                                                                                                                                   >  1:1927436/1‑289 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTATTCAGGCCTTTTaag                                                                                                                                                                                             >  2:2446797/1‑286 (MQ=255)
                                                                                       tGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAAt                                                                                                                                                                                             >  1:892794/1‑287 (MQ=255)
                                                                                         gTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCtt                                                                                                                                                                                         >  1:356429/1‑289 (MQ=255)
                                                                                                aGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAACCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAg                                                                                                                                                                                  <  2:185810/289‑1 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                              >  1:2134432/1‑289 (MQ=255)
                                                                                                    gAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCGACGGGTGAAGCGGCAAGTATCAGCGACGGCCCGGGGCGCGGTAACTAGGCACTTTAAttctcttctccgtctg                                                                                                                                                                              >  2:3152300/1‑283 (MQ=255)
                                                                                                      aGTGGATGCTAATCCGAGGCGCTGCCCGCAGATCAATCTGATTGACCGGGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGAGCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGa                                                                                                                                                                             <  2:2835416/288‑1 (MQ=255)
                                                                                                         gtATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGa                                                                                                                                                                          >  1:2560574/1‑288 (MQ=255)
                                                                                                            tGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTa                                                                                                                                                                                                                                                      <  2:335250/209‑1 (MQ=255)
                                                                                                             gCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCAt                                                                                                                                                                     <  2:394268/289‑1 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGCCGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTCTTCCGCCGGATGAGCCACGTcc                                                                                                                                                                 >  2:717269/1‑287 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATg                                                                                                                                                                           >  1:2613856/1‑278 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATg                                                                                                                                                                           <  2:2613856/278‑1 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCa                                                                                                                                                                 >  1:498409/1‑288 (MQ=255)
                                                                                                                  tCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCa                                                                                                                                                                 >  1:2681832/1‑288 (MQ=255)
                                                                                                                   ccGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATc                                                                                                                                                               <  1:2296995/289‑1 (MQ=255)
                                                                                                                   ccGCAGCGCTGACCGCAGATAAATCGCATTGACAGTGAAGGGATGCGGGTGATATATGAAAAACAGGACACTGCTGGTGGCGAGTTACTGCCCCAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATc                                                                                                                                                               <  2:2293876/289‑1 (MQ=255)
                                                                                                                       aGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAg                                                                                                                                                                                  <  1:1377651/266‑1 (MQ=255)
                                                                                                                         cgcTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCtt                                                                                                                                                         >  1:1095871/1‑289 (MQ=255)
                                                                                                                           cTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAACCAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCAttt                                                                                                                                                                                                 <  2:2537641/247‑1 (MQ=255)
                                                                                                                           cTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCAttt                                                                                                                                                                                                 >  1:2537641/1‑247 (MQ=255)
                                                                                                                               ccccAGATCACGCTCATTGACCGGGAAGGGATGCGGTGGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACCGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGTTGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTAcc                                                                                                                                                    <  2:86733/285‑1 (MQ=255)
                                                                                                                               ccGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTAccc                                                                                                                                                   <  2:2789528/289‑1 (MQ=255)
                                                                                                                                          tctcATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATAAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCCTCCGGCTTTTACCTCACCGCAatat                                                                                                                                        >  2:1879441/1‑289 (MQ=255)
                                                                                                                                               ttGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAgg                                                                                                                                                                                                      >  1:2988414/1‑222 (MQ=255)
                                                                                                                                               ttGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAAt                                                                                                                                   >  1:2768124/1‑289 (MQ=255)
                                                                                                                                                      tGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCa                                                                                                                            >  1:1539363/1‑289 (MQ=255)
                                                                                                                                                              tGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGcc                                                                                                                                                                       >  1:1867282/1‑238 (MQ=255)
                                                                                                                                                              tGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCGCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCAACCGCAATATGAATTTCCTGCATCTTTAtg                                                                                                                    >  2:21993/1‑288 (MQ=255)
                                                                                                                                                                 gggTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGAc                                                                                                                 <  1:812685/289‑1 (MQ=255)
                                                                                                                                                                              aaaaCAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGATGGCAGCGAACCGATTCCCAAATCGCTGCAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGAGACGGACTGGCGCGCGTTACTCAGGCATTTCAATTCTTTTCTCAGCCGGATAAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCg                                                                                                    >  2:1091920/1‑289 (MQ=255)
                                                                                                                                                                              aaaaCAGGACACGCCTGGTAGCGAGTTACTGCCCCAAGCAAAAGATCCGGAAACCAGGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCg                                                                                                    <  2:1800142/289‑1 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAg                                                                                                                                                                                                                                             <  2:272652/147‑1 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGc                                                                                                                                                                                                                                         >  1:162000/1‑151 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAg                                                                                                                                                                                  <  2:2865652/206‑1 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCAt                                                                                                                                                                >  2:1354500/1‑224 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCAt                                                                                                                                                                <  1:1354500/224‑1 (MQ=255)
                                                                                                                                                                                   aGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGt                                                                                                >  1:730609/1‑288 (MQ=255)
                                                                                                                                                                                     gACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCTTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTgca                                                                                             >  1:1978001/1‑289 (MQ=255)
                                                                                                                                                                                     gACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTgca                                                                                             >  1:959635/1‑289 (MQ=255)
                                                                                                                                                                                     gACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTgca                                                                                             >  2:1667297/1‑289 (MQ=255)
                                                                                                                                                                                      acgctgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTg                                                                                               <  1:2210340/283‑1 (MQ=255)
                                                                                                                                                                                         ctgctgGTAGCGAGTTACTGCCACAAGCATAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGAAGCGAACCGATTCCCGACTCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGTCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCAt                                                                                         <  1:1791155/289‑1 (MQ=255)
                                                                                                                                                                                          tgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGgc                                                                                                                                                                                                                    <  1:2027958/165‑1 (MQ=255)
                                                                                                                                                                                          tgctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCgg                                                                                                                                                                              <  2:2360905/203‑1 (MQ=255)
                                                                                                                                                                                            ctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCtgg                                                                                                                                                                                                                                                            <  2:2043660/123‑1 (MQ=255)
                                                                                                                                                                                            ctgGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGgc                                                                                                                                                                                                                    <  2:3225510/163‑1 (MQ=255)
                                                                                                                                                                                                  gCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGTAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCCATATGAAATTCCTGCATCTTTATTGACCTTCCACCGCCCGGCGGCCAGCATAAAAATaca                                                                                >  2:551650/1‑289 (MQ=255)
                                                                                                                                                                                                    gAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAgg                                                                                                                                                                                                      >  2:460919/1‑169 (MQ=255)
                                                                                                                                                                                                    gAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATacaac                                                                              >  1:1157924/1‑289 (MQ=255)
                                                                                                                                                                                                    gAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATacaac                                                                              <  1:1460218/289‑1 (MQ=255)
                                                                                                                                                                                                      gttcgtcgcccaAGCAAAAGTGCCGGACACCACGTCGCGGTGGATGGACCGTTCCCTTGCTGACAGCCAACCGATTCCCGAAGCGCTGAAAATCCAGATGGCTGGCTGCCTTGTGGCTACGGGTGAAGCGACAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTCAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATacaaca                                                                             <  2:2885805/278‑1 (MQ=255)
                                                                                                                                                                                                      gTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATacaaca                                                                             <  1:2827448/288‑1 (MQ=255)
                                                                                                                                                                                                         aCTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCa                                                                                                                            <  2:1136826/238‑1 (MQ=255)
                                                                                                                                                                                                          cTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAacac                                                                        <  2:1539363/289‑1 (MQ=255)
                                                                                                                                                                                                               acaacaaaaaGATCCGGAAACCACGGCGAATTGGATTGGGCGTGGCCTTGCTGGCAGCGACCCGATTCCCGAATCGCTGAAAATCCGGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGACTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTGCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacataac                                                                   <  2:2560574/283‑1 (MQ=255)
                                                                                                                                                                                                                caAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCAt                                                                                         <  1:2405683/266‑1 (MQ=255)
                                                                                                                                                                                                                caAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCAt                                                                                         >  2:2405683/1‑266 (MQ=255)
                                                                                                                                                                                                                  aGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacataacata                                                                >  1:3259076/1‑289 (MQ=255)
                                                                                                                                                                                                                    cAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATaaa                                                              <  2:1616736/289‑1 (MQ=255)
                                                                                                                                                                                                                     aaaaGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAAc                                                             <  1:2360469/289‑1 (MQ=255)
                                                                                                                                                                                                                           tCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGa                                                         <  1:3216954/287‑1 (MQ=255)
                                                                                                                                                                                                                                 aaCCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAAcc                                                  <  1:2873936/288‑1 (MQ=255)
                                                                                                                                                                                                                                    cACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATacaaca                                                                             <  2:2652995/258‑1 (MQ=255)
                                                                                                                                                                                                                                       ggCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACacat                                                                      <  2:620678/262‑1 (MQ=255)
                                                                                                                                                                                                                                             gTGGATTGAGCGTTGCCGTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAGATGCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTCTCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGt                                      <  2:2334024/288‑1 (MQ=255)
                                                                                                                                                                                                                                               ggATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGt                                      <  1:837938/286‑1 (MQ=255)
                                                                                                                                                                                                                                                  ttGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCg                                 <  1:2074676/288‑1 (MQ=255)
                                                                                                                                                                                                                                                   tGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATaaaaa                                                                                    >  1:1828647/1‑236 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAacac                                                                        >  1:3146797/1‑246 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTa                                                     <  2:1287207/265‑1 (MQ=255)
                                                                                                                                                                                                                                                     aGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTa                                                     >  1:1287207/1‑265 (MQ=255)
                                                                                                                                                                                                                                                        gTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATaaaaa                                                                                    >  2:20046/1‑231 (MQ=255)
                                                                                                                                                                                                                                                        gTTGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTg                            >  1:2334024/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGCACCGATTCCCGAATCGCTGAAAAACCAAATGGCTTGCTGCCTGGTCGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTCAATCTTTTCTCAACCGGATGAGCCAGGTCATCCGGCTTTTACCCCACCGCATTATGAAATTCATGCATCGTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACAAAACATAAAATGGATGTCACCAAGGAAAGTGATAACCGCTTTGAt                          >  2:1823747/1‑287 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCa                                                                                                                                                                      <  2:2100568/147‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTa                                                                                                                                                      >  1:2490581/1‑163 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTg                                                                                               <  1:1018594/218‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGAt                          >  1:668769/1‑287 (MQ=255)
                                                                                                                                                                                                                                                           gCCTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGc                        >  2:3114410/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            ccTTGCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTc                      <  1:450308/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                gCTGGCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGa                   >  2:892806/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                    gCAGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCt               >  1:1245324/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      aGCGAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGc             >  1:2859602/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         gAACCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGca            <  1:3052053/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aCCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCAt                                                                                                                           >  1:2271156/1‑173 (MQ=255)
                                                                                                                                                                                                                                                                           aCCGATTCCCGAATCGCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCAt                                                                                                                           <  2:2271156/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                      
GCGTCTTTCCAGCGTTAGCCATCCGGAATACATTGGACGCGTCGCGAAGTTCTTTAGCGATATCGGCGGGCGGGCGCTACTAATGCATGGTACTGAAGGTGAAGTGTATGCTAATCCGCAGCGCTGCCCGCAGATCAATCTCATTGACCGTGAAGGGATGCGGGTGCTGTATGAAAAACAGGACACTGCTGGTAGCGAGTTACTGCCACAAGCAAAAGATCCGGAAACCACGGCGCAGTGGATTGAGCGTTGCCTTGCTGGCAGCGAACCGATTCCCGAAAGCCTGAAAATCCAGATGGCTTGCTGCCTGGTGGCTACGGGTGAAGCGGCAACTATCAGCGACGGCCTGGCGCGCGTTAATCAGGCATTTTAATTCTTTTCTCAGCCGGATGAGCCATGTCATCCGGCTTTTACCCCACCGCAATATGAAATTCCTGCATCTTTATTGACCTTCCCACGCCCGGCGTGCAGCATAAAAATACAACAAACACATAACATAAACAGGAGTTAACCATGGAAAGTGGTCATCGCTTTGATGCTCAGACGCTGCACAGTTTTATT  >  CP042583/698732‑699292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A