Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,483,421 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,483,4210AT99.7% 819.9 / NA 343intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (192/150);  minor base G (0/1);  total (192/151)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,483,4220CG99.7% 831.5 / NA 343intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (192/150);  minor base T (0/1);  total (192/151)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,483,4230TA99.7% 822.3 / ‑6.6 343intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (192/149);  minor base G (0/1);  total (192/151)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 343 total aligned reads displayed.

CTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGGCTACCACTCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTC  >  CP042583/1483147‑1483690
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                            
cTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACg                                                                                                                                                                                                                                                                  >  1:3086204/1‑289 (MQ=255)
                ttCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCaaa                                                                                                                                                                                                                                                   >  1:1931443/1‑288 (MQ=255)
                  cAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGAGCTTCTCGAAGCCAAAAGTGCTGTACATACCATAGACTAAACGGCTACATCCGTTAACTTCATCTCGCATTTGTTCTTCAGTACAGAAGATATGCCCGTCATCCTGGGTAAATCCACGCAAGCGCATCCGGCCATGCCGCGAGCTTGACGGCCCGTTACGGTGGCATCTaactaact                                                                                                                                                                                                                                                 >  2:9346/1‑288 (MQ=255)
                                                                                 cgtcgCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGCTAAGACTTCAGCCCCGGGGTGAAAATTTGTACGTGAc                                                                                                                                                                                  >  2:603135/1‑288 (MQ=255)
                                                                                 cgtcgCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGCCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCACCGAACCTGACGGCTCGTTACGGCTGCCGCTACCCAACTCGGCCATACCCAGCGGCCGATCGCGCCAAGCCTCCAGCCCCTGGCTGAAAACTTGTCCgctac                                                                                                                                                                                  >  2:543403/1‑284 (MQ=255)
                                                                                     gCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCggg                                                                                                                                                                             <  1:1259757/289‑1 (MQ=255)
                                                                                             tACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCAt                                                                                                                                                                     <  2:3124284/289‑1 (MQ=255)
                                                                                                       aGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAAt                                                                                                                                                            >  1:1396745/1‑288 (MQ=255)
                                                                                                                ggAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                                                                                                                                  <  2:300865/289‑1 (MQ=255)
                                                                                                                      tttGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                       >  1:2747809/1‑246 (MQ=255)
                                                                                                                      tttGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                       <  2:2747809/246‑1 (MQ=255)
                                                                                                                      tttGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                       >  1:2498817/1‑246 (MQ=255)
                                                                                                                         gacgacGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCggg                                                                                                                                                                             >  1:255319/1‑253 (MQ=255)
                                                                                                                         gacgacGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCa                                                                                                                                        >  1:1123349/1‑289 (MQ=255)
                                                                                                                              cgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                  <  1:2671684/243‑1 (MQ=255)
                                                                                                                              cgaTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCagaag                                                                                                                                    <  1:1319993/288‑1 (MQ=255)
                                                                                                                              cgaTCTTCTCCAATCCAAAAGTGCTGTACATATAATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGCTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCagaag                                                                                                                                    <  2:2574037/288‑1 (MQ=255)
                                                                                                                                aTCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCt                                                                                                                                                                >  1:199249/1‑259 (MQ=255)
                                                                                                                                           gCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGGTCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGCACGTTACCCGGGCAGTTCACCGGCTTAATGCAGTATTACCGTGTT‑ACAGAAGATGAGGTGAACAtt                                                                                                                      >  2:2105721/1‑289 (MQ=255)
                                                                                                                                           gCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACAtt                                                                                                                      >  1:3117791/1‑289 (MQ=255)
                                                                                                                                             cAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGc                                                                                                                    <  1:3231064/289‑1 (MQ=255)
                                                                                                                                             cAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGc                                                                                                                    >  2:888438/1‑289 (MQ=255)
                                                                                                                                              aaaaGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGACCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCa                                                                                                                   <  2:351336/289‑1 (MQ=255)
                                                                                                                                                        tACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGa                                                                                                                           <  1:2822079/271‑1 (MQ=255)
                                                                                                                                                          cATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGAc                                                                                                                                                                                  >  2:3150706/1‑215 (MQ=255)
                                                                                                                                                          cATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGc                                                                                                                    <  1:1961034/276‑1 (MQ=255)
                                                                                                                                                             atCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCGGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCCAGGTTC‑TCAGAAGATGTGGTTAACAGTGCATCTTTGTAGTTGTc                                                                                                     >  1:1627315/1‑288 (MQ=255)
                                                                                                                                                               cATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCCTCAGACCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCTTGGTTGAAAATTTGTACGTGACCAGGGCAGTTCAACGGCTTAATGCCTTATTCACGGTTC‑TCAGAAGAGGGTGTGAACATTGCATCTTTGTAGTTTTCCCa                                                                                                  >  2:2449989/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGAt                                                                                                                                                                                                                            >  1:2379445/1‑165 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGAt                                                                                                                                                                                                                            <  2:2379445/165‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAg                                                                                                                                                                          <  2:1043198/215‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAg                                                                                                                                                                          <  2:770022/215‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCa                                                                                                                                                         <  2:1221904/232‑1 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  2:825240/1‑289 (MQ=255)
                                                                                                                                                                  aGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTg                                                                                               >  1:1854163/1‑289 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGACGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCAGGCAGGGAACCTGACGGATCGTTACGGTGGCAGCTACAAAACTAGGCCATACGCAGCGGCAGCTCGCGATAAGACTTCCGCCCCTGGTTGCAAAATTGTACGTCTCACAGGCCGGTCATCGGCTTAATGACGTATTGAAGGTTCTTCAG‑AGATGTTGTGCACATCACATTTTTTTGGTTGTacctatgt                                                                                              >  2:1957517/1‑283 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTAc                                                                                                                                                                                       >  1:824156/1‑200 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGc                                                                                                                    <  2:2512662/266‑1 (MQ=255)
                                                                                                                                                                    aCTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGa                                                                                              >  2:1465744/1‑288 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCa                                                                                                                                                                                                                                     <  2:309781/150‑1 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCtt                                                                                                               >  2:3116545/1‑267 (MQ=255)
                                                                                                                                                                        aaCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGt                                                                                         >  2:1266168/1‑289 (MQ=255)
                                                                                                                                                                         aCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGt                                                                                                                                                       <  1:1757754/227‑1 (MQ=255)
                                                                                                                                                                         aCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCa                                                                                                                                                  >  2:2315857/1‑232 (MQ=255)
                                                                                                                                                                         aCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCtt                                                                                                               <  1:3126813/266‑1 (MQ=255)
                                                                                                                                                                         aCGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGtt                                                                                        >  2:1773019/1‑289 (MQ=255)
                                                                                                                                                                              tACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGc                                                                                                                                                          >  1:1221828/1‑219 (MQ=255)
                                                                                                                                                                              tACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCCCGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTACCAGTGACCGGtctttc                                                                                    >  2:2923234/1‑287 (MQ=255)
                                                                                                                                                                                 aTCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCca                                                                                <  2:1187314/289‑1 (MQ=255)
                                                                                                                                                                                       tAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCCACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                                                                                                                                >  1:2073863/1‑220 (MQ=255)
                                                                                                                                                                                         aCTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGacac                                                                        <  1:2902662/289‑1 (MQ=255)
                                                                                                                                                                                            tCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCgg                                                                                          <  1:2099670/268‑1 (MQ=255)
                                                                                                                                                                                             cATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGt                                                                     >  1:908863/1‑288 (MQ=255)
                                                                                                                                                                                              aTCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATa                                                                                                                                                                                                                                         <  2:2149204/124‑1 (MQ=255)
                                                                                                                                                                                              aTCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGAt                                                                                                                                                                                                                      >  2:1114705/1‑143 (MQ=255)
                                                                                                                                                                                               tCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCca                                                                  >  1:745321/1‑289 (MQ=255)
                                                                                                                                                                                                cgcgAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACg                                                                                                                                                                                                                                       >  1:2269439/1‑124 (MQ=255)
                                                                                                                                                                                                cgcgAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACg                                                                                                                                                                                                                                       <  2:2269439/124‑1 (MQ=255)
                                                                                                                                                                                                 gcgacattttacttcAGTACAGAATATATGCGCGTCATCCTGCGTAAATCCACGCACGCTCATCAGGCACTGCAGCGAACCTGACGGCACGCTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCTCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCcatc                                                                <  2:1517107/278‑1 (MQ=255)
                                                                                                                                                                                                        tGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAGAGCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACg                                                         <  1:9346/289‑1 (MQ=255)
                                                                                                                                                                                                           tcttaAGTACAGAAAATATCCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGGCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGAc                                                      <  1:433108/289‑1 (MQ=255)
                                                                                                                                                                                                                  gaCAGAAGAGATGCGCGTCATCCTGGGAAAATCCACGCCCCCGCATCAGGCCAGGCAGCGGACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGTAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  2:272954/287‑1 (MQ=255)
                                                                                                                                                                                                                   aCAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  1:1051144/287‑1 (MQ=255)
                                                                                                                                                                                                                   aCAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  2:1854163/287‑1 (MQ=255)
                                                                                                                                                                                                                    cAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                >  2:3248032/1‑286 (MQ=255)
                                                                                                                                                                                                                    cAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACt                                              >  1:850072/1‑288 (MQ=255)
                                                                                                                                                                                                                    cAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACt                                              >  1:2397723/1‑288 (MQ=255)
                                                                                                                                                                                                                       aagaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCt                                          >  2:2002760/1‑289 (MQ=255)
                                                                                                                                                                                                                        agaTAGGCGCGTCATCCTGGGGAACTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTcc                                           <  2:3210092/287‑1 (MQ=255)
                                                                                                                                                                                                                         gaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCa                                                                                                                                                                                                                                           >  2:3075324/1‑95 (MQ=255)
                                                                                                                                                                                                                         gaTATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGaca                                                                         <  2:1684391/256‑1 (MQ=255)
                                                                                                                                                                                                                           tatGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGa                                        <  1:603135/287‑1 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGt                                                                                                                                                                                     <  2:239863/146‑1 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTa                                                                                                                                                              >  1:1451473/1‑169 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTg                                                                                                                     >  1:501113/1‑209 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGAc                                                                                             >  1:1022729/1‑233 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                >  2:1371827/1‑278 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGAt                                       >  1:1182976/1‑287 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGAt                                       >  1:1709152/1‑287 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGAt                                       >  1:2616092/1‑287 (MQ=255)
                                                                                                                                                                                                                            atGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTACATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGAt                                       >  1:2427615/1‑287 (MQ=255)
                                                                                                                                                                                                                                   tCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCa                                                                                                                                                                                                                                                            <  2:412192/68‑1 (MQ=255)
                                                                                                                                                                                                                                   tCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCa                                                                                                                                                                                                                                                            >  1:412192/1‑68 (MQ=255)
                                                                                                                                                                                                                                   tCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATg                                                                                                                                                           >  2:703090/1‑165 (MQ=255)
                                                                                                                                                                                                                                   tCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATg                                                                                                                                                           <  1:703090/165‑1 (MQ=255)
                                                                                                                                                                                                                                      tCCGGGGTAAAGCCCCGCACGCGCATCAGACCGTGCAGAGCACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCtt                           <  2:1627315/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ctggtgaaaTCCACGCACGCGCATCAGGCCCTGCAGCGAACCTGCCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCttt                          <  2:1931443/282‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCcac                                                                               >  2:660640/1‑227 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCcac                                                                               <  1:660640/227‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGt                                                                     >  1:3181287/1‑237 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTTga                 >  1:338961/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aTCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAga                 >  1:2150615/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 tCCACGCACGCGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAgaa                <  1:3061940/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     cgcacgcGCATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACg                                                                                                                                                <  2:2026447/158‑1 (MQ=255)
                                                                                                                                                                                                                                                           cgcATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTg                                                                                                                     <  2:1438863/178‑1 (MQ=255)
                                                                                                                                                                                                                                                           cgcATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTaa                                                <  2:1988565/247‑1 (MQ=255)
                                                                                                                                                                                                                                                           cgcATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGCTCCTGTTACTCTTTCCGTTTAGAACGaacaaaca      >  2:2806575/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           cgcATCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGaacaaac       >  1:983695/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               tCAGGCCATGCAGCGAACCTTACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTc  <  1:1496557/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               tCAGGCCATGCAGCGAACCTGACGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTc  <  2:439276/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                            
CTTCACCCAGTTGATATTCAAACGGGATGTTGTTTTCTTCCAGCGCAACCGCCAGGTCCGCCTCAGCACGATCCCACATTTCGTCGCTGCCAATACGTTTTTCAGGACGAGTGGAGAGTTTGACGACGATCTTCTCGAAGCCAAAAGTGCTGTACATATCATAGACTAAACGGATACATCCGTTAACTTCATCGCGAATTTGTTCTTCAGTACAGAAGATATGCGCGTCATCCTGGGTAAATCCACGCACGCGCATCAGGCCATGCAGGCTACCACTCGGCTCGTTACGGTGGCAGCTACCAAACTCGGCCATACGCAGCGGCAGATCGCGATAAGACTTCAGCCCCTGGTTGAAAATTTGTACGTGACCCGGGCAGTTCATCGGCTTAATGCAGTATTCACGGTTC‑TCAGAAGATGTGGTGAACATTGCATCTTTGTAGTTGTCCCAGTGACCGGTTTTTTCCCACAGGACACGGTCCATCATGAACGGACCTTTAACTTCCTGATACTGGTACTCTTTCAGTTTAGAACGAACAAACACTTC  >  CP042583/1483147‑1483690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A