Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,509,439 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,509,4390AT99.1% 800.6 / NA 342intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (177/160);  minor base G (1/2);  total (179/163)
Fisher's exact test for biased strand distribution p-value = 6.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,509,4400CG99.4% 810.6 / NA 342intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base G (178/161);  total (179/163)
Fisher's exact test for biased strand distribution p-value = 2.28e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,509,4410TA99.4% 820.7 / NA 342intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (179/161);  minor base C (0/2);  total (179/163)
Fisher's exact test for biased strand distribution p-value = 2.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 342 total aligned reads displayed.

ACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGACTCTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCGAGACGATTGT  >  CP042583/1509159‑1509716
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
        cagccgccATGCGTCATGCTTTCAAGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGCGTTCATTGAGATAACCCCATACTCC‑‑CGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGc                                                                                                                                                                                                                                                                      <  2:1166260/286‑1 (MQ=255)
            cgccATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGCTAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCCCACGCCTGTTTGCCAGTAACTGGGACGTGCCAGCCAACGCCTg                                                                                                                                                                                                                                                                   >  2:1767339/1‑289 (MQ=255)
            cgccATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACg                                                                                                                                                                                                                                                                       >  1:1420851/1‑285 (MQ=255)
               cATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGtt                                                                                                                                                                                                                                                                 <  1:348259/288‑1 (MQ=255)
                                cGTAAATCAAAGTATTTTAGGTCGCTAATCGGGTTGTCAGCGGCAAGGATTTCATTGAGATAACCCCATACGCCGGCGTGTTCCCGACCCTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCt                                                                                                                                                                                                                                               <  2:513502/289‑1 (MQ=255)
                                          aGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACt                                                                                                                                                                                                                                     <  1:1581011/289‑1 (MQ=255)
                                                                       gCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCAc                                                                                                                                                                                                                                                 >  1:392180/1‑248 (MQ=255)
                                                                                  ttCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATa                                                                                                                                                                                             >  1:2662815/1‑289 (MQ=255)
                                                                                  ttCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCCGTTGGTGGCAAAACAGCACCTGGCGGTTCCTCACGGCAATCCCGTCATTCTGAAAAACCCCCTGGGCGATa                                                                                                                                                                                             >  2:2719441/1‑289 (MQ=255)
                                                                                   tCATTGACATAACCCAAGACTCCGGCGTGGTCCCGACACTCCTGCTGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATa                                                                                                                                                                                             <  2:2024703/288‑1 (MQ=255)
                                                                                            tAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc                                                                                                                                                                                                       >  2:3218951/1‑269 (MQ=255)
                                                                                               ccccATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGtttt                                                                                                                                                                                >  2:862728/1‑289 (MQ=255)
                                                                                               ccccATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGtttt                                                                                                                                                                                >  1:2444592/1‑289 (MQ=255)
                                                                                                    tACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACg                                                                                                                                                                                                                        <  1:1213694/244‑1 (MQ=255)
                                                                                                         cGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc                                                                                                                                                                                                       >  2:2665237/1‑256 (MQ=255)
                                                                                                         cGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc                                                                                                                                                                                                       >  1:2998964/1‑256 (MQ=255)
                                                                                                         cGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGaa                                                                                                                                                                      >  1:1514298/1‑289 (MQ=255)
                                                                                                             gtgtTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAAt                                                                                                                                                                   <  2:2444592/288‑1 (MQ=255)
                                                                                                              tgtTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATc                                                                                                                                                                  <  2:773961/288‑1 (MQ=255)
                                                                                                               gtTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                <  1:1181784/289‑1 (MQ=255)
                                                                                                               gtTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                <  1:2265590/289‑1 (MQ=255)
                                                                                                               gtTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                <  1:555999/289‑1 (MQ=255)
                                                                                                                ttCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                >  1:1633150/1‑288 (MQ=255)
                                                                                                                ttCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGATTTGCTGGGCGAAAATCAc                                                                                                                                                                >  1:1389960/1‑288 (MQ=255)
                                                                                                                         cTCCTGAGGCAGGACCAACATCATGGACCCATCATCGCGGCACAGCAGTTGGCTGTTAAACAGATAGGTCGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCAGTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGa                                                                                                                                                      <  2:2845839/289‑1 (MQ=255)
                                                                                                                            cTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCGGTTGGTGGCAAAACAGCACCTGGCGGTGACTAATGGCAATCACGTCATTATGAAAAAAGCCACGGTCGATAACCTCCGGGGTTTGCCGGGCTGAAAACACCAGGTggggtatc                                                                                                                                                   >  2:1622939/1‑285 (MQ=255)
                                                                                                                              gAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCAc                                                                                                                                                 <  1:1048084/289‑1 (MQ=255)
                                                                                                                                     caCCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAAt                                                                                                                                                                                                                            <  2:2123858/207‑1 (MQ=255)
                                                                                                                                     caCCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAAt                                                                                                                                                                                                                            >  1:2123858/1‑207 (MQ=255)
                                                                                                                                     caCCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTc                                                                                                                                          >  1:894119/1‑289 (MQ=255)
                                                                                                                                      aCCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaaa                                                                                                                                                                                                             >  2:1732565/1‑221 (MQ=255)
                                                                                                                                             tcatGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc                                                                                                                                                                                                       <  1:2059671/220‑1 (MQ=255)
                                                                                                                                               atGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                >  1:2351211/1‑257 (MQ=255)
                                                                                                                                               atGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGcc                                                                                                                                 >  1:3285990/1‑288 (MQ=255)
                                                                                                                                                tGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACg                                                                                                                                                                                                                        <  2:2056855/200‑1 (MQ=255)
                                                                                                                                                 ggacccatcctgcaggCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTTAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGACTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCAcc                                                                                                                              <  2:1937049/275‑1 (MQ=255)
                                                                                                                                                      catcatCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCg                                                                                                                                                                        <  2:221369/242‑1 (MQ=255)
                                                                                                                                                      catcatCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCt                                                                                                                          >  1:1855050/1‑288 (MQ=255)
                                                                                                                                                        tcatcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGgcgagcga                                                                                                                                                                                                                                                                          >  2:1281732/1‑142 (MQ=255)
                                                                                                                                                         catcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTc                                                                                                                         >  1:3159807/1‑286 (MQ=255)
                                                                                                                                                         catcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCt                                                                                                                      <  1:760563/289‑1 (MQ=255)
                                                                                                                                                           tcGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGcc                                                                                                                                                                                                       <  1:3115989/206‑1 (MQ=255)
                                                                                                                                                            cgcgGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTg                                                                                                                     >  1:2493083/1‑287 (MQ=255)
                                                                                                                                                                   cagcagTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaaa                                                                                                                                                                                                             <  2:652734/192‑1 (MQ=255)
                                                                                                                                                                   cagcagTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGaaa                                                                                                                                                                                                             >  1:652734/1‑192 (MQ=255)
                                                                                                                                                                    agcagTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCa                                                                                                                                                  <  1:2394277/250‑1 (MQ=255)
                                                                                                                                                                         ttGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTg                                                                                                       <  2:2500009/288‑1 (MQ=255)
                                                                                                                                                                         ttGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGACGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGACCGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGTCTTAAATCACCTGTTGGGGCTTCACCTGTTTCCGCCTTTCCACCGCCTCGCTGGCTTCGGGAGTCTg                                                                                                       >  2:303460/1‑288 (MQ=255)
                                                                                                                                                                            gCTGGTCAACAGATAGGTAGCCACAGTATCAGCAACGGAAACCTGAGTTGCCGGAACTGCTATCGCCAGAAAACCCATGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTcg                                                                                                    <  2:1420851/288‑1 (MQ=255)
                                                                                                                                                                                        aTAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACgg                                                                                       >  1:2586972/1‑289 (MQ=255)
                                                                                                                                                                                        aTAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACgg                                                                                       >  1:503362/1‑289 (MQ=255)
                                                                                                                                                                                              aGACACCGTATCGAAAACGGAAACCTGCGTTGCCGGAACTTCTATCGCCATAAAGCCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGG‑TACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGcc                                                                                <  2:1111589/289‑1 (MQ=255)
                                                                                                                                                                                              aGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCt                                                                                                                      >  2:439828/1‑252 (MQ=255)
                                                                                                                                                                                                acacCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTTCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACgg                                                                                       >  2:736092/1‑281 (MQ=255)
                                                                                                                                                                                                 cacCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCgg                                                                              <  1:1767339/289‑1 (MQ=255)
                                                                                                                                                                                                 cacCGTATCAGACACGGAAACCGGAGTTGCCGCAACTTCTATCGCCATAAAACCATTGACCCGCGCACTCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCgg                                                                              <  1:1954996/289‑1 (MQ=255)
                                                                                                                                                                                                    cGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTgg                                                                                                                                                                                                                                             >  1:2716425/1‑127 (MQ=255)
                                                                                                                                                                                                    cGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCAc                                                                                                                                                 <  2:292150/219‑1 (MQ=255)
                                                                                                                                                                                                    cGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTa                                                                           >  1:1934302/1‑289 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACg                                                                                                                                                                                                                        <  2:3290417/146‑1 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCa                                                                                                                                                                                                                     >  1:1314354/1‑149 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGAt                                                                                                                                                                                              >  2:2943555/1‑172 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTggg                                                                                                                                                                          <  2:3150043/192‑1 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGt                                                                                                                                                            <  1:2541494/206‑1 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGTATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCCTCGCGAGTCTGTCGCGACGGATAACGGGAAAGCCCGGtct                                                                          >  2:3063542/1‑286 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGGATc                                                                         >  1:726565/1‑289 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAACTGTTGGGGATTGACCTGACTCAGCCTTGCCAGCGCCTCGCTGGCTTCGCGAGGCTGTCGCGCCGGATAACGGGAAGGCCgggaca                                                                          >  2:1705117/1‑285 (MQ=255)
                                                                                                                                                                                                      tATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGCCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATc                                                                         >  1:1811194/1‑289 (MQ=255)
                                                                                                                                                                                                          aGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCCCCTGTTGGGGATTCACCTGATTCAGCCTTGCCCCCGCCTCGCTGGCTTCGCGAGTCTGTCGCCCCGCAGAACGGTAAGGCCTGGTTTccgt                                                                      >  2:3115275/1‑285 (MQ=255)
                                                                                                                                                                                                            acacGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATc                                                                                                                                                                  >  2:2383192/1‑194 (MQ=255)
                                                                                                                                                                                                            acacGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTg                                                                     >  1:1233017/1‑287 (MQ=255)
                                                                                                                                                                                                              acGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCg                                                                                                                                                                        >  1:865932/1‑186 (MQ=255)
                                                                                                                                                                                                              acGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGAt                                                                                                                                                     >  1:289267/1‑205 (MQ=255)
                                                                                                                                                                                                                ggAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCcttct                                                               >  1:987114/1‑289 (MQ=255)
                                                                                                                                                                                                                ggAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCcttct                                                               >  1:3068908/1‑289 (MQ=255)
                                                                                                                                                                                                                ggAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCcttct                                                               >  2:1400077/1‑289 (MQ=255)
                                                                                                                                                                                                                ggAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCCCGCTGGCTTCGCGAGTCTGTCGCGCCGGCTAACGGGTAGGCCCGGTAtattgtctctct                                                               >  2:1182273/1‑278 (MQ=255)
                                                                                                                                                                                                                  aaaCCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGCTTCTGTCGCGCCGGATAACGGGGAGGGCGGCGACCCTTGCcttcct                                                              >  2:1068718/1‑286 (MQ=255)
                                                                                                                                                                                                                          gTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGcc                                                                                                                                      >  2:1254003/1‑208 (MQ=255)
                                                                                                                                                                                                                                  aagttCTGTCGCCATAAACCCATGGACCCGCGCACGCGGTTTTGCCAGTAACTGTGACGGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGGTAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCGGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACaaaa                                             <  2:1558485/286‑1 (MQ=255)
                                                                                                                                                                                                                                   aCTTCTATCGCCATACAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACaaaaa                                            <  1:2936352/289‑1 (MQ=255)
                                                                                                                                                                                                                                   aCTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCAc                                                                                                                                                                <  1:823049/173‑1 (MQ=255)
                                                                                                                                                                                                                                   aCTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGtt                                                                                                                                                           >  2:2427790/1‑178 (MQ=255)
                                                                                                                                                                                                                                       cTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGCCGCGCCGGATAACGGGAAGGCCCGGGATCATTGCCTTCTTCTCGCCCGTAGACaaaagact                                         >  2:2554168/1‑284 (MQ=255)
                                                                                                                                                                                                                                       cTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCCCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCCTTGCCTTCTTCTCGCCCTGAGACAAAAAGtt                                         >  2:14896/1‑288 (MQ=255)
                                                                                                                                                                                                                                             ccATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCAc                                                                                                                                                 <  2:542962/178‑1 (MQ=255)
                                                                                                                                                                                                                                             acATAAAGCCATGGACCCGCGACCGCAGGTTTGCCAGTAACGTTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAACCGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATAcc                                  <  2:1848349/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            cccGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAAt                    <  2:2297835/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             ccGCGCACGCAGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGa                  <  1:14896/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACg                                                                                                                                                                                                         >  2:971264/1‑103 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGtt                             <  1:398967/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTc                            <  2:376843/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTc                            <  1:2795401/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCa                           >  1:449748/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                cgcacgcaGGTTTGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTCGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGtt                             >  2:398967/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                       gcaagtGCCGGTAACTGTCACGGGCGAGGGAACGCCTGTGGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCgaga         <  2:1330384/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tttGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGGCTTCTTTTCCCCCGGAGACAACACGTTCCATACCCGGTCTCCCGTAATGAccgttctcttttc     >  2:2795401/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                          tttGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCGAGACGa      <  1:1109871/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ttGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCGAGACGAtt    <  1:3236308/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            tGCCAGTAACTGTGACTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCGAGACGATtg   >  1:2950794/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
ACGCCGGGCCGCCGCCATTCGCCATGCTTTCACGTAAATCAAAGACTTTTAGTTCGCTAATCGGGTTGTCAGCGGCAAGGAGTTCATTGAGATAACCCCATACTCCGGCGTGTTCCCGACACTCCTGAGGCAGCACCAACATCATGGAACCATCATCGCGGCTCAGCAGTTGGCTGTTAAACAGATAGGTAGACACCGTATCAGACACGGAAACCTGAGTTGCCGGAACTTCTATCGCCATAAAACCATTGACCCGCGCACGCAGGTTTGCCAGTAACTGACTCTGGCGAGCGAACGCCTGTTGGTGGCAAAACAGCACCTGGCGGTTACTCACGGCAATCACGTCATTATGAAAAACGCCCTGGTCGATAACGTCCGGGTTTTGCTGGGCGAAAATCACCTGTTGGGGATTCACCTGATTCAGCCTTGCCACCGCCTCGCTGGCTTCGCGAGTCTGTCGCGCCGGATAACGGGAAGGCCGGGTATCATTGCCTTCTTCTCGCCCGTAGACAAAAAGTTGCATACCCGGTTCACCGTAATGACCGCCGAGACGATTGT  >  CP042583/1509159‑1509716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A