Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,512,335 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,512,3350GC99.1% 787.3 / ‑6.0 339intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (3/0);  new base C (155/179);  total (159/180)
Fisher's exact test for biased strand distribution p-value = 1.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01
*CP0425831,512,3360CG99.4% 798.2 / ‑5.9 339intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (154/179);  minor base A (1/1);  total (159/180)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,512,3370TA99.1% 802.8 / NA 339intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base A (157/179);  total (159/180)
Fisher's exact test for biased strand distribution p-value = 6.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 339 total aligned reads displayed.

CGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATGCTAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGACTATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑GCTTTTGCTCAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGG  >  CP042583/1512059‑1512603
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                          
        gCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGcc                                                                                                                                                                                                                                                          <  2:2063179/289‑1 (MQ=255)
        acGGATGTACCTGACCGATGACGTCCGGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGcc                                                                                                                                                                                                                                                          <  1:2971648/288‑1 (MQ=255)
               tACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGAGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGGCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATGAAACTTGT‑CGCGAACAGCCGCCCAAAACATAAAGCG‑CGATTTCTACAACAAATAGCCTCGTCCCTCttt                                                                                                                                                                                                                                                    >  2:2971648/1‑288 (MQ=255)
                 ccTGCCCGATGACTGCCTGGTCTTCCGGGGATAAAAAGTGGGTATAGTTCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTgcg                                                                                                                                                                                                                                                 <  2:1872989/289‑1 (MQ=255)
                      ccGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCtt                                                                                                                                                                                                                                                     <  1:370833/280‑1 (MQ=255)
                      ccGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCtt                                                                                                                                                                                                                                                     >  2:370833/1‑280 (MQ=255)
                      ccGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAg                                                                                                                                                                                                                                             >  1:1697647/1‑288 (MQ=255)
                      ccGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTACCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAg                                                                                                                                                                                                                                             >  2:1828220/1‑288 (MQ=255)
                         aTGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTTT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCg                                                                                                                                                                                                                                         >  1:2533710/1‑289 (MQ=255)
                         aTGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACACCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAACAGCCGCTATACACATAAAGCGCGCTTTCG‑TCAGAAAATAGCCGTCTCGCCATTTGCGCATGTCCg                                                                                                                                                                                                                                         >  2:2373326/1‑289 (MQ=255)
                          tGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCgg                                                                                                                                                                                                                                        >  2:260367/1‑289 (MQ=255)
                          tGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCg                                                                                                                                                                                                                                         <  1:1636019/288‑1 (MQ=255)
                           gACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCggg                                                                                                                                                                                                                                       <  1:3201317/289‑1 (MQ=255)
                           gACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCggg                                                                                                                                                                                                                                       <  2:2299334/289‑1 (MQ=255)
                                  tGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                <  1:1572714/289‑1 (MQ=255)
                                   ggggTTCCTGGGATAAAAAGGGGGTATAGTCCGGATGGTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAGGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                <  2:1456215/288‑1 (MQ=255)
                                    ggCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAAc                                                                                                                                                                                                                              >  2:2841620/1‑289 (MQ=255)
                                      cTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACa                                                                                                                                                                                                                             <  1:114877/288‑1 (MQ=255)
                                            gggATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGca                                                                                                                                                                                                                      <  2:1567397/289‑1 (MQ=255)
                                              gATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGca                                                                                                                                                                                                                      >  1:1456215/1‑287 (MQ=255)
                                                   aaaGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTc                                                                                                                                                                                                                >  2:2559981/1‑288 (MQ=255)
                                                   aaaGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTc                                                                                                                                                                                                                >  1:2679704/1‑288 (MQ=255)
                                                          gTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTACCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGctgctg                                                                                                                                                                                                         <  1:1828220/288‑1 (MQ=255)
                                                              aGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                >  1:2436544/1‑261 (MQ=255)
                                                                 tCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGgtgt                                                                                                                                                                                                  <  1:1939130/288‑1 (MQ=255)
                                                                    gATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCg                                                                                                                                                                                                                                         >  1:3293667/1‑246 (MQ=255)
                                                                    gATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCCCGCTGCTGCCggatggat                                                                                                                                                                                               >  2:1775702/1‑282 (MQ=255)
                                                                     aTGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTGCCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCtt                                                                                                                                                                                                                                                     <  2:2011307/233‑1 (MQ=255)
                                                                     aTGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCg                                                                                                                                                                                             >  1:1103143/1‑289 (MQ=255)
                                                                     aTGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGAACAGCTCGCTGCTGCCGGTGTGATCg                                                                                                                                                                                             >  1:424445/1‑289 (MQ=255)
                                                                                tCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGaaa                                                                                                                                                                                  <  1:2841620/289‑1 (MQ=255)
                                                                                 cAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAAc                                                                                                                                                                                 <  1:3218664/289‑1 (MQ=255)
                                                                                    ttCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAACATCGGCGCGGCCAAAATCCATCGAAAAGAAGCGTCTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCACCCACTTTGTCATTAAACTTGT‑CGCGAAAAGCTGCCATAACAATAACGCG‑CGATTTCGACAGCAAATAGCCATTGCCCTCTTTGCGCCAGTCCGGGCCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGAGTGATCGTAACTgagactcac                                                                                                                                                                               >  2:2216775/1‑283 (MQ=255)
                                                                                    ttCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTc                                                                                                                                                                                                                                           <  2:3100695/228‑1 (MQ=255)
                                                                                           aTAAAGGCCTTTTGCCCGGGGCCGCAGGGAAAAGCGGCGCGGCTAAAACCCATCGAAAAGAGGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGGGTTCGTCAATCCCCCCGCGCAGTTAAGCAACCAGTTTGTCATTAACCTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTGGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCa                                                                                                                                                                       <  2:635043/289‑1 (MQ=255)
                                                                                             aaaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     <  1:3129567/289‑1 (MQ=255)
                                                                                             aaaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     <  1:2212495/289‑1 (MQ=255)
                                                                                              aaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATATAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATg                                                                                                                                                                    >  2:407742/1‑289 (MQ=255)
                                                                                              aaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     >  1:1323807/1‑288 (MQ=255)
                                                                                              aaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     >  2:1319980/1‑288 (MQ=255)
                                                                                              aaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     >  1:761764/1‑288 (MQ=255)
                                                                                              aaTGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCCCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTa                                                                                                                                                                                          >  2:230447/1‑267 (MQ=255)
                                                                                                 gCCTTTTGCCCGGTGCCGCAGGGAAAATCGGCCAGGCTAAAATCCAGCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGt                                                                                                                                                                 <  2:724737/289‑1 (MQ=255)
                                                                                                 gCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCCCGCTGCTGCCGGTTTGATCGTTACTGAGAAACAGCTTCGGCAATGCGt                                                                                                                                                                 >  2:3210755/1‑289 (MQ=255)
                                                                                                      ttGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAg                                                                                                                                                            >  1:310759/1‑289 (MQ=255)
                                                                                                      ttGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAg                                                                                                                                                            >  1:829580/1‑289 (MQ=255)
                                                                                                      ttGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAg                                                                                                                                                            >  1:877838/1‑289 (MQ=255)
                                                                                                                 cGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGct                                                                                                                                                  <  2:829580/288‑1 (MQ=255)
                                                                                                                 cGCAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGct                                                                                                                                                  <  1:226061/288‑1 (MQ=255)
                                                                                                                   cAGAGAAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCtt                                                                                                                                               >  2:240985/1‑289 (MQ=255)
                                                                                                                       gaAAATCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCttttg                                                                                                                                            <  2:1519293/288‑3 (MQ=255)
                                                                                                                        aaaaagggCGCGGCTAAAATCCATGGAAAAGAGACGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCttttgag                                                                                                                                          <  2:2359836/283‑5 (MQ=255)
                                                                                                                        aaaaTCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                <  1:2114959/203‑1 (MQ=255)
                                                                                                                           aTCGGCGCGGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCT‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCTCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGCGCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTAttttgaggcg                                                                                                                                       >  1:3190295/1‑282 (MQ=255)
                                                                                                                                  cgGCTAAAATCCATCGAAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGgtgt                                                                                                                                                                                                  <  2:793109/223‑1 (MQ=255)
                                                                                                                                     atAAAATCCATCGAAAAGAAGCGGTTCCCGAGGCTTTGCCAGAACGGGGAATAGCCGTGTTCGTCAATCACCCAGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGgtgt                                                                                                                                                                                                  <  2:1172961/219‑1 (MQ=255)
                                                                                                                                           tccatcgaaaaGAAGCGTTTACCGGGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGa                                                                                                                       <  2:1103143/281‑1 (MQ=255)
                                                                                                                                               tcgaaaaGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGAcgc                                                                                                                    <  1:2363868/284‑1 (MQ=255)
                                                                                                                                                     agaagCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGtt                                                                                                             <  1:1991710/289‑1 (MQ=255)
                                                                                                                                                            tttACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCTCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTa                                                                                                                                                                                          >  2:2180143/1‑205 (MQ=255)
                                                                                                                                                               aCCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGa                                                                                                   <  1:1775702/289‑1 (MQ=255)
                                                                                                                                                                         tGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCtt                                                                                                                                                                                                                                                     >  1:2015792/1‑133 (MQ=255)
                                                                                                                                                                          gCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGAt                                                                                                                                                                                               <  2:863215/186‑1 (MQ=255)
                                                                                                                                                                               aacggtgaataGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAAt                                                                                                                                                                     <  2:2140811/199‑1 (MQ=255)
                                                                                                                                                                                    tgaataGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGctgctg                                                                                                                                                                                                         >  1:694156/4‑166 (MQ=255)
                                                                                                                                                                                    tgaataGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCa                                                                                >  1:2610414/4‑287 (MQ=255)
                                                                                                                                                                                        taGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCaa                                                                          <  1:961290/289‑1 (MQ=255)
                                                                                                                                                                                           ccGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                >  2:601796/1‑136 (MQ=255)
                                                                                                                                                                                           ccGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGaa                                                                                                                                                                                                                                <  1:601796/136‑1 (MQ=255)
                                                                                                                                                                                              tgtTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCttttg                                                                                                                                            <  1:476431/217‑3 (MQ=255)
                                                                                                                                                                                              tgtTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTa                                                                                                          <  2:1678982/251‑1 (MQ=255)
                                                                                                                                                                                              tgtTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTa                                                                                                          >  1:1678982/1‑251 (MQ=255)
                                                                                                                                                                                                ttCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATACACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCCACAGTTGTACCAGGGAACGTTCAGCCCAACCGCCACCTCAATGGCACaa                                                                  >  2:1193053/1‑289 (MQ=255)
                                                                                                                                                                                                   gTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGa                                                                                                                  <  2:477242/238‑1 (MQ=255)
                                                                                                                                                                                                     cAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCttttg                                                                                                                                            >  2:139971/1‑208 (MQ=255)
                                                                                                                                                                                                      aaccACCCCGCGCATTGCAGAAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATcccc                                                            <  2:2679704/286‑1 (MQ=255)
                                                                                                                                                                                                          aCCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAg                                                                                                               <  1:3029714/234‑1 (MQ=255)
                                                                                                                                                                                                          aCCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAg                                                                                                               >  2:3029714/1‑234 (MQ=255)
                                                                                                                                                                                                          aCCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCa                                                        <  2:3192608/289‑1 (MQ=255)
                                                                                                                                                                                                            cccGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑TGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACg                                                      >  1:2734795/1‑289 (MQ=255)
                                                                                                                                                                                                            cccGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTAc                                                                                                         <  2:2776072/238‑1 (MQ=255)
                                                                                                                                                                                                                cgcATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCgctgct                                                                                                                                                                                                          <  2:3128782/137‑1 (MQ=255)
                                                                                                                                                                                                                 tcATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCAAAAAGTCGCAATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCATTCCGGTTCGATAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGc                                                  <  1:1020610/287‑1 (MQ=255)
                                                                                                                                                                                                                    tttCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTg                                                   >  1:2336842/1‑284 (MQ=255)
                                                                                                                                                                                                                          cAACCACTTTGTCATTAAACTGGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGAGTTCGAGAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCTAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                        <  1:2178720/289‑1 (MQ=255)
                                                                                                                                                                                                                               aCTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCa                                                                                                                                                                       <  2:517531/157‑1 (MQ=255)
                                                                                                                                                                                                                               aCTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCa                                                                                                                                                                       >  1:517531/1‑157 (MQ=255)
                                                                                                                                                                                                                                    cgtctctaaCTTGTGCGCCGAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAg                               <  2:1293773/282‑1 (MQ=255)
                                                                                                                                                                                                                                        ttAAACTTGT‑GGCGAGAAGCACCCATAAACATAAAGCG‑CGATTTCGACAGCAAATGGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACAGTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                          <  2:3275508/289‑1 (MQ=255)
                                                                                                                                                                                                                                        ttAAAATGGT‑GGCGGAAGGCCGCCATAAACATAGAGCG‑CGGTTTCGACAGCAAATAGCCGTTTCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                          <  2:761764/289‑1 (MQ=255)
                                                                                                                                                                                                                                          aaaCTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTTAAGCGTGCACCAACGTGCCGACGCGATAGTTGTACCAGGGa                                                                                                   >  2:446299/1‑214 (MQ=255)
                                                                                                                                                                                                                                               tGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCa                                                                                                                                                                       >  2:1935222/1‑141 (MQ=255)
                                                                                                                                                                                                                                               tGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTtata                                                                                                                                                             >  2:161343/1‑151 (MQ=255)
                                                                                                                                                                                                                                               ggT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCa                                                                                                                                                                       <  2:3153102/140‑1 (MQ=255)
                                                                                                                                                                                                                                                gT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATa                   >  1:2140513/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   agcgAACAGCCACCCTAACCATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGTGGTGAGCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGcc                <  1:79456/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        aaaGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCt           <  1:1604958/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          aGCCGCCATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCa         <  2:1704595/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccgccATAAACATAAAGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACt       <  1:1276834/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ataaacataaaGCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTgg  <  1:2303293/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                          
CGCGGTTTGCGGATGTACCTGACCGATGACGTCCTGGGCTTCCTGGGATAAAAAGTGGGTATAGATCGGATGTTTCGGCATCAGTTCTGCAATAAATGCCTTTTGCCCGGTGCCGCAGAGAAAATCGGCGCGGCTAAAATCCATGCTAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGACTATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTGTCATTAAACTTGT‑CGCGAAAAGCCGCCATAAACATAAAGCG‑GCTTTTGCTCAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGG  >  CP042583/1512059‑1512603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A