Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F210 I1 R1 4928 385.2 6658600 97.5% 6492135 231.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,535,562 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,535,5620GC99.7% 861.3 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (170/192);  minor base A (0/1);  total (170/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,535,5630CG99.5% 849.5 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (169/192);  total (170/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,535,5640TA99.5% 865.2 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (169/190);  minor base C (0/2);  total (170/193)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

AAAGTACCCTTGATTACTTTAACCTTGCTGTTGCTCTGATAGCTAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGGCTCTCGATAAAGTATTTACCACTGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGGCT‑CCAGTTACCAACAAAACTGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAAACTGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGACTGCCGATGAAATAACCAAACATT  >  CP042583/1535284‑1535838
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
 aaGTACCCTTGATTACTTTAACCTTGCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGtt                                                                                                                                                                                                                                                                              <  1:837651/286‑1 (MQ=255)
     aCCCTTGATTACTTTAACCTTGCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACcaa                                                                                                                                                                                                                                                                         <  2:1039344/287‑1 (MQ=255)
     aCCCTTGATTACTTTAACCTTGCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACcaa                                                                                                                                                                                                                                                                         <  2:2620650/287‑1 (MQ=255)
     aCCCTTGATTACTTTAACCTTGCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACcaa                                                                                                                                                                                                                                                                         <  2:443646/287‑1 (MQ=255)
                          gCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCAt                                                                                                                                                                                                                                                  <  2:303468/289‑1 (MQ=255)
                          gCTGTTGCTCTGATACGAAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACAAt                                                                                                                                                                                                                                                  >  1:165347/1‑289 (MQ=255)
                                          gaaGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAGCATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcg                                                                                                                                                                                                                                  <  1:545817/287‑1 (MQ=255)
                                          gaaGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcg                                                                                                                                                                                                                                  <  1:2392234/287‑1 (MQ=255)
                                          gaaGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcg                                                                                                                                                                                                                                  <  2:2784949/287‑1 (MQ=255)
                                           aaGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcgc                                                                                                                                                                                                                                 >  1:641475/2‑289 (MQ=255)
                                            aGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcgcg                                                                                                                                                                                                                                <  2:1121826/289‑1 (MQ=255)
                                            aGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcgcg                                                                                                                                                                                                                                <  2:2566461/289‑1 (MQ=255)
                                            aGTAAGCGGGGGTAAACGAATAATCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATAGTGGCGACTCGATAAAGTATTTACCTGAGTGAAACCAGGCTAACAGTATGCCAATACCACCCACCAGAAACATTATGCGCCAACTAAAAAAAGCGATAACCACCACCCCTATCGCCGCAAACAGCATGGGCGA‑CCAGTGACAAACAAATGAGAGCCGCGCGCACCATTTCCCACGAACCCTcgcg                                                                                                                                                                                                                                >  2:2901196/1‑289 (MQ=255)
                                                aGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTAc                                                                                                                                                                                                                                                                            >  2:625482/1‑241 (MQ=255)
                                                aGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGa                                                                                                                                                                                                                            >  1:2198444/1‑289 (MQ=255)
                                                     ggttAAACGCATTCTCTTCTCTCTTTAAATGTGCTTCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATaaa                                                                                                                                                                                                                        <  2:72881/285‑1 (MQ=255)
                                                      ggTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCAt                                                                                                                                                                                                                                                  >  2:701084/1‑261 (MQ=255)
                                                      ggTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAAc                                                                                                                                                                                                                       >  1:3200876/1‑288 (MQ=255)
                                                      ggTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACATGAGAGAAACCAGGCGAACAGTATGCCAATACCACCCAGCAGAAACATTATTACCCAACTAAAAAAAGCGCTAAACACCACGCCTATCGCCCAAGACAGCA‑GGGCCTACCAGTAACCAACAACTGAGAGCCGCGCGGAACATTCACCACGCACCGTCGCTGGGATacac                                                                                                                                                                                                                       >  2:2384944/1‑288 (MQ=255)
                                                             gAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTaaa                                                                                                                                                                                                               <  2:1358195/289‑1 (MQ=255)
                                                               aTACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATa                                                                                                                                                                                                                          >  1:2484875/1‑276 (MQ=255)
                                                               aTACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTaaatg                                                                                                                                                                                                             >  2:1083435/1‑287 (MQ=255)
                                                                        tctctTTCAATTTGCTTCTCTACTTCACGAAGTTTGCATTCTGAACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGc                                                                                                                                                                                                    <  2:3200876/289‑1 (MQ=255)
                                                                        tctctTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAg                                                                                                                                                                                                     >  2:2484654/1‑288 (MQ=255)
                                                                        tctctTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGc                                                                                                                                                                                                    <  2:2320204/289‑1 (MQ=255)
                                                                        tctctTTCAATTTGCTGCCCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGc                                                                                                                                                                                                    <  2:1545071/289‑1 (MQ=255)
                                                                          tctTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCa                                                                                                                                                                                                  <  1:3092660/289‑1 (MQ=255)
                                                                             ttCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAAcc                                                                                                                                                                                               >  1:274754/1‑289 (MQ=255)
                                                                                  tttGCTGCTCTACTTCCAGAAGTTGGCATTCTGCCCCTTCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAAt                                                                                                                                                                                          <  2:944269/289‑1 (MQ=255)
                                                                                                gcccGAAATAGGGATGCTGCACCTGAGAATTGCCCTTTCCCTCACCGCAATCGTAGCGACACGATAAAGTACTTAACAGAGAGAAACCAGGCTAACAGGATGCCAATAACACCCAGCAGAAACAATATACGCCACCTAAAAAAAGCGATAACCGCCACGCCTATCGCCGCAGACAGCATGGGCCA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCACTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTc                                                                                                                                                                            <  2:51116/286‑1 (MQ=255)
                                                                                                   cGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCAAAATCAGCCCCCCCAtc                                                                                                                                                                             >  2:2489815/1‑284 (MQ=255)
                                                                                                      aGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAgcgc                                                                                                                                                                                    <  1:608706/275‑1 (MQ=255)
                                                                                                        ttGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGc                                                                                                                                                                                                    >  2:866835/1‑257 (MQ=255)
                                                                                                                        gCGATTTGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGAc                                                                                                                                                                                                                                                     <  2:2878045/192‑1 (MQ=255)
                                                                                                                            tttGCCCTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 <  1:2309727/288‑1 (MQ=255)
                                                                                                                                cccTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTAc                                                                                                                                                                                                                                                                            >  2:693344/1‑161 (MQ=255)
                                                                                                                                cccTTTCCCTGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTAc                                                                                                                                                                                                                                                                            <  1:693344/161‑1 (MQ=255)
                                                                                                                                cccTTTCCCCGACAGCCATCGTGGCGACTCGATAAGATATTTACCTGAGAGAAACCAGTCTAACAGTATGCCAAGACCCCCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  2:2707800/289‑1 (MQ=255)
                                                                                                                                         tGCCAGCCATCGTGGCGACTCGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACaaat                                                                                                                                                                                                                                                                    <  2:1195261/160‑2 (MQ=255)
                                                                                                                                            cagaacacGTGGACACTCGATAAAGGATTTACCAGAGAGGAACCAGGATAACAGTATCCCAATAACACCCAGCAGAAACAATATTAGCAAACTAAAAAAAGCGATAACCACCACGACTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATc                                                                                                                                 <  2:3143578/281‑1 (MQ=255)
                                                                                                                                                        cgactcGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGc                                                                                                                     <  1:2868758/285‑1 (MQ=255)
                                                                                                                                                          actcGATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGc                                                                                                                  <  1:1960060/288‑1 (MQ=255)
                                                                                                                                                              gATAAAGTATTTACCTGAGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 <  1:3147649/254‑1 (MQ=255)
                                                                                                                                                                        ttacctgagagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  1:974795/241‑1 (MQ=255)
                                                                                                                                                                          acctgagagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAgc                                                                                                                                                                                      <  1:761090/199‑1 (MQ=255)
                                                                                                                                                                          acctgagagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  1:3059792/241‑1 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGG‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGCTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTgc                                                                                                         <  2:353293/276‑1 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATa                                                                                                                                                                                                                          <  2:568800/163‑1 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGt                                                                                                                                                                                                                  <  1:2808297/171‑1 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 >  1:1314334/2‑237 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 <  2:1314334/236‑1 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACcga                                                                                              >  2:1419100/2‑288 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGCTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTgc                                                                                                         >  1:353293/2‑277 (MQ=255)
                                                                                                                                                                               agagaAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGGTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCCCCCCCATTCCTGTTCCTATCCGGAAGCGAAAAAAGATGAGCCAGACCATAAAAGGGACAAAAGCGGCACCTGTTGCCGCAACACcga                                                                                              >  2:1487140/2‑288 (MQ=255)
                                                                                                                                                                                  gaAAACAGGATAGCAGTAGTCCTATACCACCCAGCAGAAACATAATTCGCCAGCGAGAAAAAGCGAGAACCACCACGCCGATCACGTCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGGTCCGCGCGGAACATTTTCCACGCACCGTCGCGGAGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACcgacg                                                                                            <  2:165347/287‑1 (MQ=255)
                                                                                                                                                                                         ggCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  1:1268360/232‑1 (MQ=255)
                                                                                                                                                                                         ggCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            >  2:1268360/1‑232 (MQ=255)
                                                                                                                                                                                         ggCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGc                                                                                                                  >  1:2913332/1‑258 (MQ=255)
                                                                                                                                                                                           cTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTaaatg                                                                                                                                                                                                             >  1:471412/1‑163 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTcc                                                                                                                                                                                                                    <  1:1497889/149‑1 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 >  1:2221653/1‑216 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  2:2941383/221‑1 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGaaa                                                                        >  2:1189416/1‑289 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGaa                                                                         >  1:3033865/1‑288 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGaa                                                                         >  1:849735/1‑288 (MQ=255)
                                                                                                                                                                                                    tGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATAACGACGATGAGAAGATTTAAGCaaaa                                                                        >  2:1524298/1‑289 (MQ=255)
                                                                                                                                                                                                          tACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAgg                                                                                                                                                              >  2:2200873/1‑197 (MQ=255)
                                                                                                                                                                                                          tACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGc                                                                     >  1:2858063/1‑286 (MQ=255)
                                                                                                                                                                                                           accaccCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAgg                                                                                                                                                              <  1:119091/196‑1 (MQ=255)
                                                                                                                                                                                                            ccaccCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTgc                                                                >  1:1628394/1‑289 (MQ=255)
                                                                                                                                                                                                             caccCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTgcg                                                               <  1:2975942/289‑1 (MQ=255)
                                                                                                                                                                                                               cccAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCCGACAGCCTGGGCGA‑CCAGTTACCAACTAATGAGAGCCGCGCGGACCATTTTCTACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCATCGCCCCCATTCCTGTTCCCACCTGGAAGCGAAACAAGATGAGCCAGTACACATCAGCGACAAAAGCGGCCCCTGGTATAGCAATACCCACGACGGCAAGATTTCAACGAAACGCTCTgcac                                                              >  2:2071108/1‑286 (MQ=255)
                                                                                                                                                                                                               cccAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGccc                                                                                                                >  2:3089741/1‑238 (MQ=255)
                                                                                                                                                                                                               cccAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGcgcc                                                             >  1:1905674/1‑289 (MQ=255)
                                                                                                                                                                                                                 cagcagAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTg                                                                                                          >  1:2535044/1‑242 (MQ=255)
                                                                                                                                                                                                                  agcagAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGcgccgc                                                           >  1:3278624/1‑288 (MQ=255)
                                                                                                                                                                                                                    cagAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcgcg                                                                                                                                                                                                                                <  1:2567672/121‑1 (MQ=255)
                                                                                                                                                                                                                    cagAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAagaaga                                                                                                                                                 <  1:1354990/200‑1 (MQ=255)
                                                                                                                                                                                                                    cagAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  2:3251629/205‑1 (MQ=255)
                                                                                                                                                                                                                     agAAACATTATTGTCCAACTAAAAAAAGCGATAACCACCACGCCTCTCGACGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGAGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCCTAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCgccgcc                                                          <  1:88243/286‑1 (MQ=255)
                                                                                                                                                                                                                      gAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGc                                                                                                                                            <  1:2140716/203‑1 (MQ=255)
                                                                                                                                                                                                                           attattCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAagtagt                                                 <  1:703001/289‑1 (MQ=255)
                                                                                                                                                                                                                           attataCCCCAACAAAAAAAAGCGACAACAACCCCGCCTACCACCGCAGACACCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAagtagt                                                 <  2:1628394/289‑1 (MQ=255)
                                                                                                                                                                                                                           acaattcaccacagaaaaaaaGCGATAACCACCACGCCTATCGCCGCAAACAGCAAGCGCGC‑CCAGTTACCAACAAACGCGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTACATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAagtagt                                                 <  2:2289424/275‑1 (MQ=255)
                                                                                                                                                                                                                              attCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTgcg                                                               >  1:1126696/1‑272 (MQ=255)
                                                                                                                                                                                                                                   ccAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATa                                         <  2:1241844/289‑1 (MQ=255)
                                                                                                                                                                                                                                       cTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAAcc                                     <  1:1007120/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tAAAAAAAGCGATACCCCCCCCGCCTATCGCCGCAGACAGCATGGGCGA‑CCCGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAAccc                                    <  1:1532054/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tAAAAAAAGCGATAACCCCCACGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAAccc                                    <  1:2895592/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aGCGATACCCGCCACTCCTAGCGCCGCAGACAGCATGGCCGA‑ACAGTTACCAACAAAGGGGAGCCGCGGGGACCAGTTTCCACGCACCGTCGCGAGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCTGTa                             <  1:121184/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           cacGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTcgcg                                                                                                                                                                                                                                >  1:1081968/1‑82 (MQ=255)
                                                                                                                                                                                                                                                            acGCCTATCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGa                >  1:322932/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  aTCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGa                                                                                                                                                        >  2:838476/1‑147 (MQ=255)
                                                                                                                                                                                                                                                                  aTCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATc                                                                                                                                 >  1:2640225/1‑170 (MQ=255)
                                                                                                                                                                                                                                                                  aTCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAAc                                      >  1:2291029/1‑261 (MQ=255)
                                                                                                                                                                                                                                                                   tCGCCGCAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACcg                                                                                               >  2:215656/1‑203 (MQ=255)
                                                                                                                                                                                                                                                                    cgccgcAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCa        <  2:1936043/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgccgcAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATCTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCAATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCa        <  2:2834524/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gcAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTAc                                                                                                                                      >  1:1749818/1‑159 (MQ=255)
                                                                                                                                                                                                                                                                        gcAGACAGCATGGGCGA‑CCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTAc                                                                                                                                      <  2:1749818/159‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
AAAGTACCCTTGATTACTTTAACCTTGCTGTTGCTCTGATAGCTAGTAAGCGGGGGTAAACGAATACTCTTCTCTCTTTCAATTTGCTGCTCTACTTCACGAAGTTGGCATTCTGCACCTGCGATTTGCCCTTTCCCTGCCAGCCATCGTGGGCTCTCGATAAAGTATTTACCACTGAGAAACCAGGCTAACAGTATGCCAATACCACCCAGCAGAAACATTATTCGCCAACTAAAAAAAGCGATAACCACCACGCCTATCGCCGCAGACAGCATGGGGCT‑CCAGTTACCAACAAAACTGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAAACTGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGCCAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGACTGCCGATGAAATAACCAAACATT  >  CP042583/1535284‑1535838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A