Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F210 I1 R1
|
4928 |
385.2 |
6658600 |
97.5% |
6492135 |
231.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,576,869 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,576,869 | 0 | A | T | 100.0%
| 884.6
/ NA
| 368 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (182/186); total (182/186) |
| * | CP042583 | 1,576,870 | 0 | G | C | 100.0%
| 878.7
/ NA
| 368 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (182/186); total (182/186) |
| * | CP042583 | 1,576,871 | 0 | C | G | 99.5%
| 881.0
/ NA
| 368 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (179/186); minor base T (2/0); total (182/186) |
| Fisher's exact test for biased strand distribution p-value = 2.43e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 368 total aligned reads displayed.
GCTATGGAAATTATCGACGAACTGGAACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTAAGCCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTAGCATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCAAGTGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCG > CP042583/1576590‑1577145
|||
ggAAATTATCGACGAACTGGAACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACtt > 1:693162/1‑289 (MQ=255)
ccGCAGCGAAGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGAATGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCggg < 2:2335840/289‑1 (MQ=255)
gACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTTCGCCCGCAAATTAACCGGGa > 2:2512524/1‑283 (MQ=255)
gACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGa < 1:2512524/283‑1 (MQ=255)
gACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCt < 1:2179309/289‑1 (MQ=255)
aaTGCCTGGTGCGGGACCATTGGCTGTTTGATCTTGTGCGGAAACATGGATACTCTGATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTGCTGCTCTGCGGGCGTTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATAACAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGGGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAat < 2:3306783/288‑1 (MQ=255)
aaTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAat < 1:192080/288‑1 (MQ=255)
cTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCg < 2:1920158/288‑1 (MQ=255)
ggCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGgctg < 2:203579/289‑1 (MQ=255)
agcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAgg > 1:413211/1‑283 (MQ=255)
agcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGgctgct < 2:297387/288‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCtgtg > 2:2816992/1‑289 (MQ=255)
aTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCtgtg < 1:28449/288‑1 (MQ=255)
aTTGGCTATTTGAGCGTTTGCGGCAACATGGAATACAGTATTACTATCCGCCCGCGAACTGCCATTAACGGACAAAGTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCtgtg < 2:702976/288‑1 (MQ=255)
ttGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGtt < 2:3225636/289‑1 (MQ=255)
ggCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTaa < 2:2266549/289‑1 (MQ=255)
cTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATcgt > 1:1270666/1‑288 (MQ=255)
gTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCATCTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGgttgtt > 2:236313/1‑289 (MQ=255)
tATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGgttgtt > 1:1361867/1‑288 (MQ=255)
tATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGgtt < 1:1663861/285‑1 (MQ=255)
ttACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGa < 1:3062471/220‑1 (MQ=255)
cTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGa < 2:1430969/217‑1 (MQ=255)
tATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACt < 2:2691661/289‑1 (MQ=255)
aTCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTc < 2:360707/289‑1 (MQ=255)
aTCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTc > 1:360707/1‑289 (MQ=255)
cGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACt < 2:1582345/285‑1 (MQ=255)
cGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCa < 1:656404/287‑1 (MQ=255)
cGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTGGTTGCTGACTCAGc > 1:2713126/1‑289 (MQ=255)
cACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGgctg < 1:2355884/233‑1 (MQ=255)
cACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGt > 2:2421821/1‑289 (MQ=255)
cTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGttcgattca > 1:993465/1‑281 (MQ=255)
ccATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGTAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCtgtg < 2:1336847/227‑1 (MQ=255)
ccATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGttcgattca > 2:3128048/1‑278 (MQ=255)
cGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTaaa < 1:2642389/289‑1 (MQ=255)
cAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAacac > 1:1472608/1‑288 (MQ=255)
aaaTTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGc < 1:2271657/289‑1 (MQ=255)
aTTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTg < 1:2771275/289‑1 (MQ=255)
tgctctgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAg < 2:2737729/289‑1 (MQ=255)
ctctgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAGAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTg > 1:1927945/1‑289 (MQ=255)
ctgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGgtt < 2:1462465/238‑1 (MQ=255)
tgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCATGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAATCCCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGc < 1:3026756/289‑1 (MQ=255)
tgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCa < 1:2472597/289‑1 (MQ=255)
tgcGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCAACGTCAGGCTGCTGTGTTAAt > 1:1874458/1‑207 (MQ=255)
tGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTGGATTCATCTGCGTAAACACCCTTGACCAGTGGCATTCCCTGGa > 2:164902/1‑289 (MQ=255)
tGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGa > 1:1184194/1‑289 (MQ=255)
aTTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTg < 1:2386702/289‑1 (MQ=255)
aTTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTg < 2:1674177/289‑1 (MQ=255)
tGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCa < 1:3113227/289‑1 (MQ=255)
gCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAATCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCa > 1:1035560/1‑270 (MQ=255)
gCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGGGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCTTAAACACGCCGGACCAGTGGCATTCCCTGGAGGGTCAGTCg > 2:2610566/1‑289 (MQ=255)
gCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTgg > 2:1974789/1‑278 (MQ=255)
gCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTgg < 1:1974789/278‑1 (MQ=255)
aGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCa > 1:3308245/1‑163 (MQ=255)
ggAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTaa < 2:1062526/240‑1 (MQ=255)
gaagaaGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGCGGTGACGTCGATGACACGGAc > 2:2468812/1‑288 (MQ=255)
agCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑cccc > 1:2057285/1‑175 (MQ=255)
agCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑TCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCatca > 2:420056/1‑286 (MQ=255)
tCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGc > 2:1229611/1‑243 (MQ=255)
aGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCa > 1:296671/1‑242 (MQ=255)
aaaCTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTTCGTAAACACGCTGGACAAGCGGCATTCCCTGGAGGTGCAGTCGATGACACGGCCGCATCAGCTATcgccgccg > 2:619340/1‑288 (MQ=255)
aaCTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTACATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCcgcg < 1:2026359/289‑1 (MQ=255)
ttttGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCt > 2:1892214/1‑288 (MQ=255)
tttGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTg < 1:54856/247‑1 (MQ=255)
tCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACTGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTgaagaa < 1:607571/289‑1 (MQ=255)
gTATCCTGACGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTGTATCGCGCTTTCAACTTTGGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTGGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAagaaga < 1:3232394/289‑1 (MQ=255)
gTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAagaaga < 1:3194351/289‑1 (MQ=255)
aTCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGa < 1:2908184/275‑1 (MQ=255)
aTCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGa > 2:2908184/1‑275 (MQ=255)
tCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTaa < 1:1545074/132‑1 (MQ=255)
tCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCa > 2:550281/1‑175 (MQ=255)
tCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTg > 2:2015170/1‑191 (MQ=255)
tCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGACGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTaa > 2:1545074/1‑132 (MQ=255)
aaGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAg > 2:2076293/1‑114 (MQ=255)
aaGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAg > 1:2333934/1‑271 (MQ=255)
aaGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCta > 1:1220390/1‑289 (MQ=255)
aaGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGGGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCACTCCGCGAAGCCGCAGGAGAGGTcccca > 2:3194351/1‑285 (MQ=255)
aCTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGa > 1:932674/1‑225 (MQ=255)
aCTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCCGCTATCCCCCCCGCGCTGCGCCAACCTGAAGCAGAGCTCGCtctccc > 2:1756938/1‑283 (MQ=255)
gaAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTc < 1:2421821/288‑1 (MQ=255)
agtagtaCGTGGAATACATACGCCTGACGTTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGAAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTccg < 2:1156648/282‑1 (MQ=255)
ggAATACCGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGt < 1:1590891/288‑1 (MQ=255)
caaTACCGTAGCCTGCAGCTTGCCGCTTTTTTCTCGCACTTTCAACCTTTGCGCCCGCATATTAACCGGCCACCCCTAAATCATCCTCCGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTCCGAGTCATCTGCGTCAACACGCTGGACAAGTGGCATTACCGGGCGGTACAGTCGAAGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAGGCCGAAGAAGAGGTGGCTATACCGCGTTCCGCTGTTgtattt > 2:527766/2‑283 (MQ=255)
cGTAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCg > 1:1101307/1‑289 (MQ=255)
tAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGGCTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTc < 2:65978/267‑1 (MQ=255)
tAGCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGt > 1:1429205/1‑288 (MQ=255)
gCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGt < 2:1715058/250‑1 (MQ=255)
gCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGt > 1:1715058/1‑250 (MQ=255)
gCCTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTc > 1:3020185/1‑265 (MQ=255)
ccTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTTATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGa < 1:883451/234‑1 (MQ=255)
ccTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGtgct > 2:1402678/1‑288 (MQ=255)
cTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGtgctgc < 1:2927727/289‑1 (MQ=255)
cTGACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGtgctgc < 1:1402678/289‑1 (MQ=255)
gACGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCACCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTgccg < 2:3044116/289‑1 (MQ=255)
aCGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACaa < 2:3324013/165‑1 (MQ=255)
aCGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGc < 1:823082/170‑1 (MQ=255)
aCGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGc > 2:823082/1‑170 (MQ=255)
aCGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCATCAGCTATCGCCGCCGCCCTGCGCGAAGGTGAAGAAGAGGTCGCTAAACCCCCTTCCGCCGTTGAAGTTAACGGGGTGCTgccg > 2:2927727/1‑288 (MQ=255)
cGCTTGATGATTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGCTGCTGACTCAGCg < 2:3023205/133‑1 (MQ=255)
gatgatTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCATCTGCGTAAACACg < 2:932672/151‑1 (MQ=255)
atgatTTTTTATCGCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTTCGATTCAt > 1:1010651/1‑137 (MQ=255)
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GCTATGGAAATTATCGACGAACTGGAACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCCTGAAGCAACTGGAGAAGTAAGACGTGGAATACCGTAGCCTGACGCTTGATGATTTTTTAAGCCGCTTTCAACTTTTGCGCCCGCAAATTAACCGGGAAACCCTAAATCATCGTCAGGCTGCTGTGTTAAT‑CCCCATCGTCCGTCGACCGCAACCGGGGTTGTTGCTGACTCAGCGTAGCATTCATCTGCGTAAACACGCTGGACAAGTGGCATTCCCTGGAGGTGCAGTCGATGACACGGACGCAAGTGCTATCGCCGCCGCGCTGCGCGAAGCTGAAGAAGAGGTCGCTATACCGCCTTCCGCCGTTGAAGTTATCGGCGTGCTGCCGCCCGTCG > CP042583/1576590‑1577145
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
