Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
473,425 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 473,425 | 0 | A | T | 100.0%
| 492.7
/ NA
| 205 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (64/141); total (64/141) |
| * | CP042583 | 473,426 | 0 | C | G | 99.5%
| 482.8
/ NA
| 205 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (64/140); minor base T (0/1); total (64/141) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 473,427 | 0 | T | A | 100.0%
| 485.0
/ NA
| 205 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (64/141); total (64/141) |
Only 100 of 205 total aligned reads displayed.
CCACGCCGCGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCT‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATC‑ATTTATGTAATGA > CP042583/473148‑473692
|||
ccccgccgcGATCTTCCGCTAACGCCTCCAAAAAATCGAACCCTTTGCCGACTTCATCGGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCGGCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGTTTCGTAATTGGTGTGCGAATTGCGTGAGCGATATCCGCTGAGAAATTGGa < 2:1278762/286‑1 (MQ=255)
ccACGCCGCGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGa < 1:888860/289‑1 (MQ=255)
ccACGCCGCGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAACTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGa < 1:733894/289‑1 (MQ=255)
aCGCCGAGATCTTCCGCTAACGCCTCGAGAAAATCGAACACGTTGCCGACTTCATCCGCCATGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGCTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACt < 2:1044460/289‑1 (MQ=255)
cgccgcGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGCAAGTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAAAAATGGGACTg > 2:1004851/1‑289 (MQ=255)
gccgcGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTgg < 1:1390389/289‑1 (MQ=255)
gccgcGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTgg < 1:234797/289‑1 (MQ=255)
gccgcGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTgg < 1:1652381/289‑1 (MQ=255)
gccgcGAGCTTCCGCTAACGCCTCGATAAAATCGAACACTTTGCCGCCTTCCTCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGGGGCAGCTCTGCGAGATTAGAGTAGAGCACATCTTCCCGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTGATTGGTGTGCGAATTTCGTGAGCTATATCCGCTGAGAAATTGGACTgg < 2:611247/289‑1 (MQ=255)
gccgaGATCTTCCGCTAACGCCTGGAAAAAATCGAACACGTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCGTTGCGGGGATTAGCTGGTTGTGATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTgg < 2:1680067/289‑1 (MQ=255)
accgcGATCTTCCGATACCGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGCGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGCGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTgg < 2:784185/288‑1 (MQ=255)
cgcgATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑g > 1:526523/1‑289 (MQ=255)
cgATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑CTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑ggg > 1:306500/1‑289 (MQ=255)
tCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTa < 1:1623070/288‑1 (MQ=255)
tCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAGCAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGa < 2:844694/289‑1 (MQ=255)
ccGCTAACTCCTCGAAAAAATCGAACACTTTGCCGACTGCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAc < 1:247564/289‑1 (MQ=255)
ccGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAc < 1:1698013/289‑1 (MQ=255)
ccGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAc < 2:331874/289‑1 (MQ=255)
cGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAcc > 1:1491724/1‑288 (MQ=255)
gCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACAt < 1:675737/289‑1 (MQ=255)
cTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATc < 1:221385/289‑1 (MQ=255)
aCGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTc > 1:402238/1‑289 (MQ=255)
gCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGGAAAAACATCCTcca > 2:736734/1‑287 (MQ=255)
cGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACg < 2:1745231/289‑1 (MQ=255)
cGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGATCCTTCTGGCTGCGCGAATGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATAGCCGCTGAGAAATTGGACTGGCGGGGGAAAGA‑ATCCTCAATaa > 1:195162/1‑287 (MQ=255)
aaaaaTCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCt < 1:467215/288‑1 (MQ=255)
aaaaaTCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTc < 1:352118/289‑1 (MQ=255)
aaaTCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGa < 1:1204739/289‑1 (MQ=255)
tCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGc < 2:572483/259‑1 (MQ=255)
tCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGc > 1:572483/1‑259 (MQ=255)
aaCACTTGGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCGCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCatat < 1:1551678/289‑1 (MQ=255)
acacTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCatat < 2:314421/288‑1 (MQ=255)
tttGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTg < 1:614988/289‑1 (MQ=255)
cGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGaacga < 2:409546/289‑4 (MQ=255)
cGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGaacg < 1:774726/288‑3 (MQ=255)
cTTCATCCGCCAGGTTTGGCATTTTCTGTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGGGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGaacgac < 2:1303952/288‑5 (MQ=255)
tCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGAGATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAAAGTCTCAATACGCTCGATCATTAGGTTCaatgacagta > 2:1499975/1‑281 (MQ=255)
aTCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCata < 1:1105712/271‑1 (MQ=255)
ccGCCCGGTTGGGCTTTTTCTTTTCGGGGATTGGCTGTTTGTTATCGGCCTGGGGGAAAAACGGAATATCGATGACCATTTTCGCAC‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAg < 2:1656781/289‑1 (MQ=255)
ccGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAg < 1:1356631/289‑1 (MQ=255)
gTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCCCGATCATATGGTTGAACGCCAGTACCAGCTGTTcc > 1:934842/1‑289 (MQ=255)
cATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGCGATCCCCAATACACCCGATACTATGGGTGAAAGGCAGTACCAGATGTTCCCGCTcc > 2:1609403/1‑288 (MQ=255)
aTTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCaa < 2:321819/289‑1 (MQ=255)
tttcttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGGAAAGAc > 2:1365367/1‑231 (MQ=255)
tcttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCt > 2:803739/1‑243 (MQ=255)
tcttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATggg < 1:1499975/289‑1 (MQ=255)
ttttcGGGGATTATCTGGTTGTTATCGGCCTGAGCGAGAAACCGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCGGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa < 1:1761747/289‑1 (MQ=255)
ttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa < 2:526523/289‑1 (MQ=255)
ttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACg < 2:582472/289‑1 (MQ=255)
gttgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCCGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAgg > 1:1751667/1‑289 (MQ=255)
tgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACAACCTCAATACGCTCCGTAAGAAGGGTGAACGCGAGTACCAGCTGTTTCAGGTCAATGGGCACGGTCTGCGGGGCGAGGCg > 1:976878/1‑289 (MQ=255)
ccTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCg < 1:428566/280‑1 (MQ=255)
gAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTTAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAAAGCCTCAAAACGCCCGATCATATGGTTAGACGACATTACCAGCTTTTCCAGACCAATGGGAACGGTCTGCGGGCAGAgggtaaagacgcga > 1:48122/1‑275 (MQ=255)
gAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGAc < 1:549176/196‑1 (MQ=255)
aGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCat < 2:490317/216‑1 (MQ=255)
aGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCat > 1:490317/1‑216 (MQ=255)
aGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCt > 1:1180411/1‑289 (MQ=255)
agagaAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTACGCTCTTCGAGATTAGAGTAGAGCACCTATTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCtt < 2:950828/287‑1 (MQ=255)
gagaAACAGCATATCGCTGACCATTTTCGCAA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCTAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 1:1724067/288‑1 (MQ=255)
atatCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCtttcgaggta < 2:1848396/285‑8 (MQ=255)
tatCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGAGCAGATGGTTGAACGACAGGACCAGCCGTTGCAGCTCAATGGGCCAGGTCTGCGGGGTGGTGACAAAGTCGAGATC‑CTGCTAGGTAATAtt > 2:660100/1‑289 (MQ=255)
tatCGCTGACCATTTT‑GCCACTTCGCGTCAGCTCTTCGAGATTAGCGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATAtt < 2:761221/289‑1 (MQ=255)
cGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCaa > 2:1524296/1‑186 (MQ=255)
cTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGaacg > 1:600846/1‑206 (MQ=255)
aCCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAAGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGAttt > 1:456952/1‑289 (MQ=255)
ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGcgcg < 1:1609403/289‑1 (MQ=255)
tggagattgtggtagagCATAGCTGCCAGGTCCTTCTGGCTGCGCGACTGGCTGGGTGATATTTCGGTTGGCGTTATGAGATTCGTAATTGGTGTGCGAATTGCGTGAGCGATATCCGCTGAGAAATTGGACTGTA‑GGGTAAAGACAGCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCGGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGt < 2:1909020/278‑1 (MQ=255)
tCGAGATTAGGGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGt < 1:1257994/289‑1 (MQ=255)
tCGAGATTAGAGTAAAGACCAGCTGCCAGGTCCTACTGGCTGCGCGACTGGCTGAGGGCGAGTTCGGTTTACGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCAATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCTATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGt < 2:1454989/289‑1 (MQ=255)
gagaTTAGAGTAGGGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGGGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑a < 1:815472/289‑1 (MQ=255)
gtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTAt < 1:228540/287‑1 (MQ=255)
gtagacagcagcTTCCGGCACCTGCGGGCTGCGCTAGTGGCTGGGGGCGATTTCGGTTTGCGTTATGGGATTCGTAATTGGTGTGCGAATTTCGTGAGCTGTATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGt < 2:934842/278‑1 (MQ=255)
tagggCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGt < 2:1331332/288‑1 (MQ=255)
tagagCCAATCTGCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGt < 2:270547/288‑1 (MQ=255)
gagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCCCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTTTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGGAGC‑TGCGGCTCGGCCCGTG‑ACCTTTATGTAc > 2:892127/1‑288 (MQ=255)
agCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTAt < 1:834086/283‑1 (MQ=255)
cacaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGc > 1:1330759/1‑288 (MQ=255)
acaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGcc < 1:1039334/288‑1 (MQ=255)
acaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGcc < 2:456952/288‑1 (MQ=255)
acaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGcc < 1:32158/288‑1 (MQ=255)
aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAAc > 1:1274098/1‑289 (MQ=255)
aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATAAGCTCGATCATATGGTTGAACGACAGTACCAGCCGGTCCAGCTCAATGGGCACGGGCTTCGGGTCGAGGCGCACGTCGAGAACTTTCGC‑GGGAAAATTCTGGCTTTGCCGGCTGAGCC‑CTCCGATCGGCCCGGG‑AACTTTTTTTAccctcac > 2:1394017/1‑283 (MQ=255)
cTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACCACCTCAATACCCTCGGTCATAAGGTTGAACCACAGTACCAGCTGTTCCAGCTCCATGGGCACGGTTTGCGGGTCCAGGCGAACGGTCAGAACCTTCCG‑GGGAAAATTTTGGGTTTGACGGGTGGAGC‑TGCGGTTCGGCGCGTGTACCttttttcacgcccaca > 2:1325692/1‑275 (MQ=255)
cTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAg < 1:713152/289‑1 (MQ=255)
ttCAAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑GCCTTTATGTACCGCCAACAGt < 1:1099910/289‑1 (MQ=255)
ccAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCTCCAATCAGCTCGATCAGATGGTTGAAAGACCGTACCAGCTGTTCCAGCTCAATGGGCACGGGTTGCGGGTCGGGGCGAAAGTCGAGATATTTCGA‑GGGAATATTTCGGGATTGAAGGGTGACGC‑GTCGGGATGGCGCGTG‑ACCTTTAGGTACCGGCAAcccgt > 2:834086/1‑284 (MQ=255)
ccAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAAACATCCCCAATACGCCCGATCATATGGTTGAACGACAGTAACAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTTGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCCTTATGTACCGcacaacgtac > 2:57814/1‑280 (MQ=255)
cTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 2:1101257/210‑1 (MQ=255)
cTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCCCGATCAGATGGTTGAACGCAAGTACCCGCTGTTTCCGCTCAATGGGCACGGTCTGCGGGGCGAGGGGAACGGCCGGTACTTTCGA‑GGGTATCTTCTGGATTTGACGGCTGACGC‑CGCGGATCGGCGCGTG‑CGCTTTATGTCTCGCCCACAGTGCGATAAAg > 2:1622801/1‑289 (MQ=255)
tCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGGCTGCGGGGCGAGGCGAACGTCGAGACCTTTTGA‑GGTAATATTCTGGATTTTGCGGGTGACGCGTGGGGAGC‑GCGCGGG‑GCGTTTTTGTATCCCCCACAGTACgcgctggt > 2:1339517/1‑281 (MQ=255)
ggCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGAt < 2:1180411/289‑1 (MQ=255)
gctgggcgactGGCTGAGGGTGATTTCGGTTTGAGTTATGAGATTCGTAATTGGTTGGCGAATTTCTTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAGGACATCCTCAATACGCTCTATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCTAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGAt < 2:1774269/279‑1 (MQ=255)
tgcgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCa < 1:1637936/281‑1 (MQ=255)
cgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGGGAAGACATTCCCAATACCCCCCCCCCTATTCTTGGACGACAGCACCAGCTGTTCCAGGCCACTGCGCCCGGTCTGCGGGTCGAGGCGCACCTCGAGCTCTTTTGA‑GGTACGACTCTGAGATTGACGGGTGCACC‑CGCGGGTCGGCGCGTG‑GCCTTTATATATCGCCCACCGTAACGCACAGACAATCAGGa > 2:1877892/6‑289 (MQ=255)
gggCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACg < 2:864945/103‑1 (MQ=255)
cGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatg < 1:1075679/288‑6 (MQ=255)
ttCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCCACAGTACGATAAAGACGATCAGGATGCTGATTTCCGATGCGGTCCAAATAAATTTATtcatca > 1:1833675/1‑289 (MQ=255)
tCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCaa < 1:1542468/289‑1 (MQ=255)
cGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCCGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGCGATCTTTCGA‑GGTAATATTCTGGATTTGACGGTCGACGC‑GGCGGATCGGCGCGGG‑GCCTTTATGTACCCCCCACAGGACGGAAAAGACGCTCCGGCTGCTGATTACCGATGCGGTCATAATTAGTTTATTAGTCAAAACTAtttatttat > 2:236025/1‑288 (MQ=255)
aTTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGA‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATC‑ATTTATGTAATGa < 2:689666/288‑1 (MQ=255)
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CCACGCCGCGATCTTCCGCTAACGCCTCGAAAAAATCGAACACTTTGCCGACTTCATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCA‑TTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGC‑GGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCT‑GGTAATATTCTGGATTTGACGGCTGACGC‑TGCGGATCGGCGCGTG‑ACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATC‑ATTTATGTAATGA > CP042583/473148‑473692
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
