Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,468,458 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,468,4580AT99.6% 552.4 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (116/119);  total (116/121)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,468,4590CG99.6% 560.7 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (115/120);  total (116/121)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,468,4600TA100.0% 565.8 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (116/121);  total (116/121)

Only 100 of 237 total aligned reads displayed.

GGTCAGGCTGAAGATGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTGCTCCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGAACTTGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGCTGTGCATAGGCTT  >  CP042583/1468179‑1468735
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
ggtcagcgagAAGATGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAgg                                                                                                                                                                                                                                                                                <  1:434082/280‑1 (MQ=255)
  tcagcgagAAGATGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGt                                                                                                                                                                                                                                                                               <  1:11485/281‑1 (MQ=255)
              tGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCAcc                                                                                                                                                                                                                                                                    <  1:1638909/287‑1 (MQ=255)
              tGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCAcc                                                                                                                                                                                                                                                                    <  2:834361/287‑1 (MQ=255)
                tCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATc                                                                                                                                                                                                                                                                 >  2:653703/1‑288 (MQ=255)
                        ttgctggggtagcgcTTCGATGTTACCCTGCTTGCCGTGCTCCTGAGTCGGGTCGGAAGCCGTGCGGATTTTTTTCGACCCCATGGTGC‑GGCGAACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATTCACGTAAATCTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGAACCATC‑‑CGTTGAaca                                                                                                                                                                                                                                                      <  2:1908620/275‑1 (MQ=255)
                          ccTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAacac                                                                                                                                                                                                                                                     >  2:911323/1‑288 (MQ=255)
                                 ttagtgttCCATTTTATCCTCCTTGCCGCGCTCCGGGGTCGGAGCTGAAACCATGCGGATTTTTTTCGACCCAATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGga                                                                                                                                                                                                                                              <  2:1008389/282‑1 (MQ=255)
                                 tACGTCTTAGATTTTAACCTGATTGCCGTGCTCCGGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCAAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGga                                                                                                                                                                                                                                              <  1:1003646/288‑1 (MQ=255)
                                 tACGTCTGCGTGTTTAACCGTCTTGCCTCGCTCCTGGTCCGGCGCGTAAATCTTGTGGATTTTTTCCGACACCTTGTCGC‑GGGGTACGATTGCCGTGCTATTCGCCGCCAGTGTCGGGTTATTCACGAAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGga                                                                                                                                                                                                                                              <  2:815688/288‑1 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCa                                                                                                                                                                                                                                                                      >  1:398058/1‑265 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGgaga                                                                                                                                                                                                                                            >  1:1047514/1‑289 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGgag                                                                                                                                                                                                                                             <  1:542254/288‑1 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGAATCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGGCAGAGCGCACCATC‑‑CGTGTAACACCGGCGgcga                                                                                                                                                                                                                                            >  2:877229/1‑289 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGCCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGACTCGGTATCAATGGATAACACCACGCCCGATGATGCGAGGCCAGAGCGCACCATC‑‑CGTCGAACACCGGCGcaga                                                                                                                                                                                                                                            >  2:1029837/1‑289 (MQ=255)
                                  aCGTCTTCGATTTTAACCTGCTGGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCCACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGCTTTATGCACGTAAAACTCATCCGGGTTAACTGCACCCTGCACGACCATCTCACCAAGGCCTCATGCGGAAGTGATAATCACCACCTTGTCAAAGCCCGATCCGGTATCAATGGAGAACATCACGCCAGCTGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACcggcggcgc                                                                                                                                                                                                                                            >  2:1291594/1‑286 (MQ=255)
                                   cGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGagag                                                                                                                                                                                                                                           <  1:911323/289‑1 (MQ=255)
                                      cTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTGGGCGCGTAACCCAGGCGGATTGTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAgcgc                                                                                                                                                                                                                                        <  2:1881230/289‑1 (MQ=255)
                                            ttttAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCacac                                                                                                                                                                                                                                   <  1:831670/288‑1 (MQ=255)
                                             tttAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCAcacca                                                                                                                                                                                                                                 <  1:1394052/289‑1 (MQ=255)
                                               tAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACg                                                                                                                                                                                                                               >  2:738429/1‑289 (MQ=255)
                                                 aCCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGt                                                                                                                                                                                                                             <  1:742266/289‑1 (MQ=255)
                                                      cTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGga                                                                                                                                                                                                                                              >  2:1601201/1‑267 (MQ=255)
                                                       gtGCCGTGTTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCg                                                                                                                                                                                                                        <  1:1809056/287‑1 (MQ=255)
                                                           cGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAAcc                                                                                                                                                                                                                   <  1:1175398/289‑1 (MQ=255)
                                                               cTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACTCGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCCAACCACGGGGAACGTACCCCTgg                                                                                                                                                                                                               >  2:216427/1‑289 (MQ=255)
                                                                   tGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           <  1:1535528/289‑1 (MQ=255)
                                                                   tGGGTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           <  1:947251/289‑1 (MQ=255)
                                                                      gTCGGCGCGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGcaca                                                                                                                                                                                                         <  1:92710/288‑1 (MQ=255)
                                                                          gcgcGTAAACCATGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTTCACACCATa                                                                                                                                                                                                    >  2:1189752/1‑289 (MQ=255)
                                                                                     acgaggATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGACGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGgcgc                                                                                                                                                                                         <  1:648667/285‑1 (MQ=255)
                                                                                     aTGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTGTCAATGGAGAACATCACGCCAGATGATCCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACAGGCGGCGAGCGCCACACCACGGGGAGCGTAAACCTGGTGAACACGCAAAGAAATGgcca                                                                                                                                                                                         >  2:1467504/1‑287 (MQ=255)
                                                                                     aTGCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGgcgc                                                                                                                                                                                         <  1:1329595/289‑1 (MQ=255)
                                                                                       ggggAGTTTTTTCGACCCCAT‑GTGCGGGCGAACGGTACCGGGGCAGTGCGCGGCTGGTGTGGGGTTATCGACGTAAAACTCATCCGGGTTAACCGCAGCCTGCACGTCCATCTCGCCAGGGCCCCATGCGGCAGTGATAAACACCAGCTGGTGAAAGCCGGGTGCGGTAGCAATGAAGAACATCACGTCAGATGAGGCGAGGTCAGAGCGCACCGTC‑‑CGTGGAACACCGGCGGAGAGGGCGACACCACGGTGATCGTAACCCTGGTGCACACGATAAGGGATGGCGCGa                                                                                                                                                                                       <  2:1732601/287‑1 (MQ=255)
                                                                                       gCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAgg                                                                                                                                                                                                                                                                                >  2:768856/1‑202 (MQ=255)
                                                                                       gCGGATTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGgcgc                                                                                                                                                                                         >  1:230956/1‑287 (MQ=255)
                                                                                           aTTTTTTTCGACCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCg                                                                                                                                                                                    <  1:653703/288‑1 (MQ=255)
                                                                                              tttttcgaccccATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGCGCGCACCATC‑‑CGTTGAAAACCCGCGGAGAGCGCCACACCACGGTGAGCGTAACCCTGGTGCACCCGATAAGAGATGGAGCACACGTTaa                                                                                                                                                                                >  2:1422962/9‑289 (MQ=255)
                                                                                                      ccccATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGaa                                                                                                                                                                        <  1:1467504/289‑1 (MQ=255)
                                                                                                      ccccATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGaa                                                                                                                                                                        <  1:244158/289‑1 (MQ=255)
                                                                                                                c‑ggcgCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACAt                                                                                                                                                              >  2:782782/1‑289 (MQ=255)
                                                                                                                      cACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           >  1:1484941/1‑239 (MQ=255)
                                                                                                                      cACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTc                                                                                                                                                         >  1:120734/1‑289 (MQ=255)
                                                                                                                      cACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGCTATCGTTACCCCGGTCCACACGATAAGAGATGCCGCGCTCGGTAAACAGAGAAGCAAATACATtttt                                                                                                                                                          >  2:1726990/1‑288 (MQ=255)
                                                                                                                      cACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCAACTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTc                                                                                                                                                         <  2:547689/289‑1 (MQ=255)
                                                                                                                         ggtcgCCGGGCGATTCGCCGCCAATGTCGGTTTATTCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACt                                                                                                                                                      <  1:1021511/285‑1 (MQ=255)
                                                                                                                         gATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTc                                                                                                                                                         >  1:1279256/1‑286 (MQ=255)
                                                                                                                         gATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACt                                                                                                                                                      >  2:1128577/1‑289 (MQ=255)
                                                                                                                              ccGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAAcc                                                                                                                                                                                                                   >  2:526488/1‑223 (MQ=255)
                                                                                                                                      ttCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACgg                                                                                                                                         <  1:1137298/289‑1 (MQ=255)
                                                                                                                                        cgccgcCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCTCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACgg                                                                                                                                         <  1:1517306/287‑1 (MQ=255)
                                                                                                                                           cgccAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCa                                                                                                                                    <  1:1559384/289‑1 (MQ=255)
                                                                                                                                                              aagTAAAAATCACCCGGGTTAACCGACACCTGACCAACCAGCTCACCAAGGCCCCAGGCGGAAGGGATAAACACCAACTGGTCAAAGCCGGATTCGGTATGAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGa                                                                                                                 <  2:1777238/287‑1 (MQ=255)
                                                                                                                                                              aCGGAAAACTCATCCGGGTTAACAGCACCCAGAACGACCAAAGCACCAAGGCCCCAGACGGAAGTGATAAACACCGACTGGTCAAAGCCGGATGCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGa                                                                                                                 <  2:1813258/289‑1 (MQ=255)
                                                                                                                                                                gTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAg                                                                                                               >  1:1704300/1‑289 (MQ=255)
                                                                                                                                                                gTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGCCGGAGAGCGCCCCACCACGGTGATCGTAACCCTGGTCCACACGATAAGAGATGGCGCGATCGTTACACAGAGAAGCAAATACATTTTTCACTGCCACGAAAACGACGTCAAAACCCTGAACGTTGAGGAAg                                                                                                               >  2:1874896/1‑289 (MQ=255)
                                                                                                                                                                          tCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGGTGAGGAAGGGTTCctgat                                                                                                     >  1:733218/1‑287 (MQ=255)
                                                                                                                                                                                        aCCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAaagaa                                                                                       >  1:1761357/1‑289 (MQ=255)
                                                                                                                                                                                        aCCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAaagaa                                                                                       >  2:702415/1‑289 (MQ=255)
                                                                                                                                                                                        aCCCTGCACGACAATCTCACCACGGCCCCATGGGGAAGGGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAaagaa                                                                                       <  2:1279256/289‑1 (MQ=255)
                                                                                                                                                                                         cccTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCg                                                                                                                                                                                                                        <  1:1844921/159‑1 (MQ=255)
                                                                                                                                                                                         cccTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAaagaa                                                                                       >  1:1105274/1‑288 (MQ=255)
                                                                                                                                                                                            tgaaCGAGCAACGCACAAAGGCCACATGCGAAAAGAATAAAAACCACATGGTCAAAGACGGATTCGTGATAAAAGGAGTAACTCACGCCAGATTATTCAAGGACAGAGCGAACCATC‑‑CGTTGAAAACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACCCGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACAGGTTACACTGCCACGAGAAAGGCGTCAAAACCCTGAACGTTGGGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCgg                                                                                   <  2:1115627/286‑2 (MQ=255)
                                                                                                                                                                                            tGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCg                                                                                    >  1:1317990/1‑288 (MQ=255)
                                                                                                                                                                                            tGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCg                                                                                    >  1:521899/1‑288 (MQ=255)
                                                                                                                                                                                              cACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTcc                                                                                 >  1:1591922/1‑289 (MQ=255)
                                                                                                                                                                                              cACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTcc                                                                                 >  1:1240110/1‑289 (MQ=255)
                                                                                                                                                                                              cACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGACCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGCACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTACGGCTGACCGGCAAAAGAAGCGTcc                                                                                 >  1:551010/1‑289 (MQ=255)
                                                                                                                                                                                                 gACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGc                                                                              <  1:1716888/289‑1 (MQ=255)
                                                                                                                                                                                                   ccagatcACCAAGGCCCCAGGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGGGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCat                                                                            <  2:1891023/284‑1 (MQ=255)
                                                                                                                                                                                                   ccATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCat                                                                            <  2:617433/289‑1 (MQ=255)
                                                                                                                                                                                                      tctcACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGa                                                                                                   >  1:326611/1‑263 (MQ=255)
                                                                                                                                                                                                      tctcACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGa                                                                                                   <  2:326611/263‑1 (MQ=255)
                                                                                                                                                                                                      tctcACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGa                                                                                                   <  2:1172094/263‑1 (MQ=255)
                                                                                                                                                                                                      tctcACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCata                                                                           >  1:1402190/1‑287 (MQ=255)
                                                                                                                                                                                                             aaGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGtt                                                                                                                                                           <  2:1092898/200‑1 (MQ=255)
                                                                                                                                                                                                                  cccATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACGGGCAAAAGAAGCg                                                                                    >  2:358279/1‑266 (MQ=255)
                                                                                                                                                                                                                  cccATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAaagaa                                                                                       >  1:1875440/1‑263 (MQ=255)
                                                                                                                                                                                                                   ccATGCGGAAGTGATAAACACCACGTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGGCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACGCCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACAGGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACTGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCg                                                            <  1:1086819/289‑1 (MQ=255)
                                                                                                                                                                                                                    cATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCgg                                                           >  1:274837/1‑289 (MQ=255)
                                                                                                                                                                                                                    cATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCgg                                                           >  1:1780435/1‑289 (MQ=255)
                                                                                                                                                                                                                           aaGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAgc                                                     >  2:1745240/1‑288 (MQ=255)
                                                                                                                                                                                                                               gATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCAc                                                 <  1:834322/288‑1 (MQ=255)
                                                                                                                                                                                                                                aTAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCGGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAgcg                                                    <  2:511757/284‑1 (MQ=255)
                                                                                                                                                                                                                                     caccacCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCaaaa                                          >  1:1095430/1‑289 (MQ=255)
                                                                                                                                                                                                                                        caccTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           >  1:158241/1‑125 (MQ=255)
                                                                                                                                                                                                                                        caccTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           <  2:158241/125‑1 (MQ=255)
                                                                                                                                                                                                                                        caccTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAagag                                       >  1:1904024/1‑289 (MQ=255)
                                                                                                                                                                                                                                          ccTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATCCGCGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGGCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGCCCGGCATATCTTCTGCGGTGCGGGAGGAGCGCACCGCAACagag                                       >  2:387441/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      cGGATTCGGTATCAATGGAGAACAGCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCAt                          <  2:1317990/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGGTATCAATGGCGAACATCACGCCAGATGATGCGAGGTCAGAGCGAACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGa                   <  1:877229/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                ataaaTGGGGAACAACACGCCAGAGGATGCGAGGGCAGAGCGAACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGc               <  2:1037021/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                ataaaTGGAGACCATCCCGTCAGGAGATGCGAGGTCAGTGCGCACAATT‑‑CGGTTAAGACTGGCGGAGCGTGCCTACCCCCGGTGCTCGTAACCCTGGTACACACGCTAAGGGATTGCGCGATCGTTAAACAGAGAATCAACTACATGTTTCACTGCCACGAGATCGGCATCAAAACCCTGAACGTTGAGGAAGGTTTCTTGGTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTCCGGTGGCGGAGGAGCGCACCGAAAAAGAGGCGTTTTCGTCATCGGCGGAAAGc               <  2:1538824/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                accAATGGAGAACACCACGCCAGATGATGCGAGGCCAGAGGGCACCAGC‑‑CGTTGAACACCGGCGGAGAGGCCCAACCCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAg                <  2:1060777/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                aTCAATGGAGAACATCACGCCAGATGATGCGAGGTCAGAGCGCACCAGC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAg                <  1:343350/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        agaACATCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACATTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGCTGTGCAt        <  1:782782/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aTCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGCTGTGCATAGGCtt  <  1:804493/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aTCACGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGCTGTGCATAGGCt   >  1:1369426/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 cGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           >  1:415012/1‑84 (MQ=255)
                                                                                                                                                                                                                                                                                 cGCCAGATGATGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGca                                                                                                                                                                                                           <  2:415012/84‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
GGTCAGGCTGAAGATGTCACGCTGTTCCTGCGGTACGTCTTCGATTTTAACCTGCTTGCCGTGCTCCTGGGTCGGCGCGTAAACCATGCGGATTTTTTTGCTCCCCATGGTGC‑GGCGCACGATAGCCGGGCGATTCGCCGCCAGTGTCGGTTTATGCACGTAAAACTCATCCGGGTTAACCGCACCCTGCACGACCATCTCACCAAGGCCCCATGCGGAAGTGATAAACACCACCTGGTCAAAGCCGGATTCGGTATCAATGGAGAACATCACGCCAGAACTTGCGAGGTCAGAGCGCACCATC‑‑CGTTGAACACCGGCGGAGAGCGCCACACCACGGTGATCGTAACCCTGGTGCACACGATAAGAGATGGCGCGATCGTTAAACAGAGAAGCAAATACATGTTTCACTGCCACGAGAACGGCGTCAAAACCCTGAACGTTGAGGAAGGTTTCCTGCTGACCGGCAAAAGAAGCGTCCGGCATATCTTCTGCGGTGGCGGAGGAGCGCACCGCAAAAGAGGCGTTTTCGTCATCGGCGGAAAGCTGTGCATAGGCTT  >  CP042583/1468179‑1468735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A