Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,476,444 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,476,4440GC100.0% 498.0 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (90/118);  total (90/118)
*CP0425831,476,4450CG99.5% 486.6 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (89/118);  total (90/118)
Fisher's exact test for biased strand distribution p-value = 4.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,476,4460TA98.6% 482.9 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (88/117);  minor base C (2/1);  total (90/118)
Fisher's exact test for biased strand distribution p-value = 5.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 209 total aligned reads displayed.

GCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCGCTGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACACTGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTGCTAAGATGACGACGGGCGAAACGTAAGAGTATTAAAGTGATG  >  CP042583/1476161‑1476723
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                     
      ctcaCGTGGCGGTGACCACGCGAATAGGCAGCACTGCGGCAGCTAATGCCGGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGcc                                                                                                                                                                                                                                                                              <  2:117219/286‑1 (MQ=255)
      cgaaCTTTGCGGGGACCACCGCAGAAGGCAGCTCTGAGGCACCTAATGCCCGGCGGGCAACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACACGATGATCGGTTAAACCACA‑CAACCGGGGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGcc                                                                                                                                                                                                                                                                              <  2:1357241/287‑1 (MQ=255)
      cTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGcc                                                                                                                                                                                                                                                                              <  1:408924/289‑1 (MQ=255)
      cTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGcc                                                                                                                                                                                                                                                                              <  1:20500/289‑1 (MQ=255)
      cTAACGGTGCGGGGACCACGCCAAAAGGCAGCTCAGCGGCAGCTAAGGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGcc                                                                                                                                                                                                                                                                              <  2:700276/289‑1 (MQ=255)
        aaCGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCaa                                                                                                                                                                                                                                                                            >  1:1084361/1‑289 (MQ=255)
           gTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGTGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTg                                                                                                                                                                                                                                                                         <  1:1142775/289‑1 (MQ=255)
                    aCCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCCCGCCCAGGGCAAACaaat                                                                                                                                                                                                                                                                >  2:678895/1‑289 (MQ=255)
                      cACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCACCCAGCCGGTCGATGCCACCAGCCCATTGCGCCAGAACCCCACGGGGAAACCCCGTTGCCGCGCCCAGATCTCGCCAACTGCTAACCAATTc                                                                                                                                                                                                                                                              >  2:177673/1‑289 (MQ=255)
                       ccGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCa                                                                                                                                                                                                                                                             <  1:1590619/288‑1 (MQ=255)
                          ccAATAGGCACACCGGCGGAACCTAACGCCGGGCGCGCTACAATCTCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGAAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCa                                                                                                                                                                                                                                                             <  2:805944/286‑1 (MQ=255)
                              tAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCgg                                                                                                                                                                                                                                                         >  1:183558/1‑286 (MQ=255)
                                  cAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGa                                                                                                                                                                                                                                                   <  1:639014/288‑1 (MQ=255)
                                   aGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCa                                                                                                                                                                                                                                                             >  2:1418208/1‑277 (MQ=255)
                                   aGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCa                                                                                                                                                                                                                                                             <  1:1418208/277‑1 (MQ=255)
                                          aggCAGCTAAGACCAGGCGCACAAAACTATCCGCCACCAGGAAGGCCCCCGCCCCGGCCAGCGCGCAGCCGGGAAGTAATACGCGATGACCGGTTAAACCACA‑CACCCGGAGAATATGGGGGCTCACCA‑GACCAATAACGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGacaac                                                                                                                                                                                                                                           <  2:713249/287‑1 (MQ=255)
                                                 tAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATc                                                                                                                                                                                                                                      <  1:1174015/286‑1 (MQ=255)
                                                   atagcAGGCCCGCTACAATATCGGCCAGAGGCAATGGGCTCCCCCCGGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGGTCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCacaa                                                                                                                                                                                                                                 <  2:1271098/285‑1 (MQ=255)
                                                           cgcgcTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCacaacaaca                                                                                                                                                                                                                            <  1:852082/286‑1 (MQ=255)
                                                            gcgcTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACgg                                                                                                                                                                                                                         <  1:819319/288‑1 (MQ=255)
                                                                tACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATc                                                                                                                                                                                                                    <  1:1315423/289‑1 (MQ=255)
                                                                     tatCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATg                                                                                                                                                                                                                >  1:875604/1‑288 (MQ=255)
                                                                        cGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACCACAACACGGGCATCAATGCCa                                                                                                                                                                                                             >  1:327633/1‑288 (MQ=255)
                                                                          gCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGCGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACACCCGATCCACAACAACACGGGGATCAATGCCAGc                                                                                                                                                                                                           >  2:1309987/1‑288 (MQ=255)
                                                                           ccAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGCGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCa                                                                                                                                                                                                          <  1:1037308/288‑1 (MQ=255)
                                                                                         cTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCgg                                                                                                                                                                                                                                                         >  1:1247220/1‑227 (MQ=255)
                                                                                         cTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCgg                                                                                                                                                                                                                                                         <  2:1247220/227‑1 (MQ=255)
                                                                                          ccGCCCCGGCCAGCGCGCAGCCCGTGAGTAGTACGCCATGCGCAGTGAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAGGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTgccg                                                                                                                                                                                          <  2:1529686/288‑1 (MQ=255)
                                                                                           cGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTgccgc                                                                                                                                                                                         <  1:1459785/289‑1 (MQ=255)
                                                                                                       cgcgcAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCCAACATATTCATCGGCCTGGCCTGACAACAGATCCCCAACAAAACGGGGATCAATGCCAGTCTCAGCCAGCCTTGCCGCCAGTCTAcacc                                                                                                                                                                              >  2:502445/1‑288 (MQ=255)
                                                                                                        gcgcAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGCCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGCAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATACTCATCGGCCTGGACTGACACCAGAACCACAACAACACGGGGATCAATGCCAGCATCCCCCAGCCTTGCCACCCGTCTAccccg                                                                                                                                                                             >  2:1574238/1‑288 (MQ=255)
                                                                                                                 ggAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCg                                                                                                                                                                    >  2:593790/1‑288 (MQ=255)
                                                                                                                    tgTAATACGCGATAATCGTTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCca                                                                                                                                                                <  1:1862757/288‑1 (MQ=255)
                                                                                                                    agaaacaCGCGATGATCGGTCAAACCACA‑AAACCGGAGAAAATGGGGAAGCACCA‑GACCAATAAAGCCGATAGCCCCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCca                                                                                                                                                                <  2:1144324/283‑1 (MQ=255)
                                                                                                                    aGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAACGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCca                                                                                                                                                                <  1:1875081/289‑1 (MQ=255)
                                                                                                                    aGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCca                                                                                                                                                                <  1:219103/289‑1 (MQ=255)
                                                                                                                        aTACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGa                                                                                                                                                                                                                                        <  1:1821708/213‑1 (MQ=255)
                                                                                                                         tccgcgAGGATCGCTTAAA‑CACACCACCCGGAGAAAAGGGGAGATACCCA‑GACACAAAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATATCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCatcatc                                                                                                                                                           <  2:1117337/287‑1 (MQ=255)
                                                                                                                          aCGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATcc                                                                                                                                                          <  1:1217520/289‑1 (MQ=255)
                                                                                                                            gcgATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACACGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGACCCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAATGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACCACAACACGGAGATCAATGCAAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAACCCGCCcacctaccag                                                                                                                                                        >  2:460239/1‑281 (MQ=255)
                                                                                                                                tgatCGGTTAAACCACA‑CAACCGTAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGAACTCGCCAAGTGCTAACATATTCAGCGGCCTGGACTGACAACAGATCCACAACAACACGGGAATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCGGCCAAAAGCGCCCATCATCCAGTACa                                                                                                                                                    >  1:1178533/1‑289 (MQ=255)
                                                                                                                                tgatCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACa                                                                                                                                                    >  1:1560704/1‑289 (MQ=255)
                                                                                                                                 gatCGGTCAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACAt                                                                                                                                                   <  1:1364394/289‑1 (MQ=255)
                                                                                                                                      gTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACgg                                                                                                                                                                                                                         <  2:564414/214‑1 (MQ=255)
                                                                                                                                          aaCCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACt                                                                                                                                                                                                                                                 >  2:522507/1‑186 (MQ=255)
                                                                                                                                               ca‑caACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCacaacaaca                                                                                                                                                                                                                            <  1:559060/202‑1 (MQ=255)
                                                                                                                                               ca‑caACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCacaaca                                                                                                                                                                                                                               <  2:859159/199‑1 (MQ=255)
                                                                                                                                               ca‑caACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCCCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCaaa                                                                                                                                      >  1:1010105/1‑288 (MQ=255)
                                                                                                                                                  caACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCa                                                                                                                                   >  2:27400/1‑289 (MQ=255)
                                                                                                                                                  caACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATAAATGCCAGCATCAGCCAGCTTTACCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCCGTACATCAGCTGACGCAAATCa                                                                                                                                   >  1:1891830/1‑289 (MQ=255)
                                                                                                                                                  caACCGGAGAATATGGGGG‑TCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCaa                                                                                                                                  >  2:1669081/1‑289 (MQ=255)
                                                                                                                                                        gagaATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGa                                                                                                                                                                                                                                                   <  2:1611618/171‑1 (MQ=255)
                                                                                                                                                        gagaATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGa                                                                                                                                                                                                                                                   >  1:1611618/1‑171 (MQ=255)
                                                                                                                                                        gagaATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAactga                                                                                                                              <  2:1084361/288‑4 (MQ=255)
                                                                                                                                                        gagaATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACACCCGCTGACCCAAATCAactgag                                                                                                                             >  2:1798013/1‑285 (MQ=255)
                                                                                                                                                           acaatGGGGGACCACCA‑GACCAATAACGCCGATACCACCCGCCAGCGCCCCACTGACGCAAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAactgaggtg                                                                                                                          <  2:182475/286‑8 (MQ=255)
                                                                                                                                                             aaagggggAACACCACGACCAATACCGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAactgaggtg                                                                                                                          <  2:1214858/285‑8 (MQ=255)
                                                                                                                                                               tGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACCCAAAGCCACAGACGTGGaaa                                                                                                                      >  2:610578/1‑289 (MQ=255)
                                                                                                                                                                     aTCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCCAATCAACTGAGGTGGAAAAGTAGa                                                                                                                >  1:1028290/1‑289 (MQ=255)
                                                                                                                                                                     aTCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGa                                                                                                                >  1:1061476/1‑289 (MQ=255)
                                                                                                                                                                      tCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGa                                                                                                                <  1:901076/288‑1 (MQ=255)
                                                                                                                                                                          cA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGcc                                                                                                           <  1:1908261/289‑1 (MQ=255)
                                                                                                                                                                          cA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGcc                                                                                                           <  1:593790/289‑1 (MQ=255)
                                                                                                                                                                          cA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGcc                                                                                                           <  1:704020/289‑1 (MQ=255)
                                                                                                                                                                          cA‑GACACATAACGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGcc                                                                                                           <  1:249624/289‑1 (MQ=255)
                                                                                                                                                                           caaaCCAATAAAGCCGATAGCACCCGCACGCGACACACTGACGCCAACCAACCAGCCGGTCGCTGCCACCAGCACCTTGCGACAGAACCACAGGGTTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGGTCCACAACAACACGGGGATCAAGGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGcc                                                                                                           <  2:958810/286‑1 (MQ=255)
                                                                                                                                                                             gACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACCGAGGGTGAAAAGTAGATAGCCCa                                                                                                         >  2:850192/1‑289 (MQ=255)
                                                                                                                                                                               ccAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCATCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCAGCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCa                                                                                                         <  1:1489900/287‑1 (MQ=255)
                                                                                                                                                                               ccAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCa                                                                                                         <  1:748878/287‑1 (MQ=255)
                                                                                                                                                                               ccAAAAAACCCCAGAGCACCCGCCAGGGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCa                                                                                                         <  2:1061476/287‑1 (MQ=255)
                                                                                                                                                                                  aTAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCCTCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCa                                                                                                    >  1:936151/1‑289 (MQ=255)
                                                                                                                                                                                  aTAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCACGTCTACGCCGCCAAAACCGCCCACCATCCAGTACATCAGCTGACGCAAATCCACCGAGGGGGAAAAGGAGATAGCCCACGTcc                                                                                                    >  2:314564/1‑288 (MQ=255)
                                                                                                                                                                                   tAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCCGCCAGCTTTGCCGCCAGTCTACGCCGACAAAACCGCCCATCATCCAGCACATCAGCTGACGACAACCAACTGAGGTGGAAAATAAAAAAGCCCAAGTCAt                                                                                                   >  2:1646850/1‑289 (MQ=255)
                                                                                                                                                                                   caacgCCGGTAGCACCCGCCAGCGCCACCCTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCAt                                                                                                   <  2:913526/285‑1 (MQ=255)
                                                                                                                                                                                   acaaGCCGATAGCCCCCGCCACGGCCACACTGACGCAAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCGAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCAt                                                                                                   <  2:207847/287‑1 (MQ=255)
                                                                                                                                                                                        ccGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGt                                                                                               >  2:1884479/1‑288 (MQ=255)
                                                                                                                                                                                         cGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGTGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTg                                                                                              <  1:460239/288‑1 (MQ=255)
                                                                                                                                                                                         cGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGt                                                                                               <  1:1669081/287‑1 (MQ=255)
                                                                                                                                                                                           aTAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGt                                                                                               <  1:1345849/285‑1 (MQ=255)
                                                                                                                                                                                           aTAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGt                                                                                               >  2:1345849/1‑285 (MQ=255)
                                                                                                                                                                                            tAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCt                                                                                          <  2:876176/289‑1 (MQ=255)
                                                                                                                                                                                                    gCCAGCGCCACACTAACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCTGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCCCTACAGaata                                                                                  >  2:237246/1‑286 (MQ=255)
                                                                                                                                                                                                                   aCGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATc                                                                                                                                                                                                                                      >  1:1657247/1‑126 (MQ=255)
                                                                                                                                                                                                                    cGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATa                                                                                   <  1:1779339/272‑1 (MQ=255)
                                                                                                                                                                                                                      gccaCCATCCAGCAGGTCTGTGAAACCAGCACATTGAGCCAGAACAGCTGGGGTAAACCCAGTTGCAGCGCCGAGATGTCTCCAAGTTATAACATATTCATCGACCTGTACAAACAACAGATCCCCAAAAACTCAGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCCCGTCATTAGTGCGCTACAGATAATCCCTAAGGCAACgccag                                                                <  2:1178533/286‑1 (MQ=255)
                                                                                                                                                                                                                         aCCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATa                                                                                   <  1:1756856/267‑1 (MQ=255)
                                                                                                                                                                                                                               cAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATa                                                       >  1:963444/1‑289 (MQ=255)
                                                                                                                                                                                                                                          tGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGtc                                            >  1:435242/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      aTTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGcc                                                                                                                                                                  >  1:1110307/1‑159 (MQ=255)
                                                                                                                                                                                                                                                      aTTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATgacga                                <  1:502445/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          cgcCAGAACCACAGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTgcg                                                                                            >  1:775207/1‑225 (MQ=255)
                                                                                                                                                                                                                                                            ccAGAACCCCAGGGGTAAATCCACTGGCCAGGCCGAGATCTCGACAAGTGCTAACATATTCGTCGGCCTGGACGTACAACAGATCCACAACACCACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTGCATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCg                          <  2:1458082/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccAGAACACAAGGGGTAAGCCCGGTGTCCGCGCCGAGATCGCGCGAAGCGATAACATATCGATCGGCCTGGACTGACAACAGATCCACAACAACACCGGGATCAATGCCAGCATGAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCg                          <  2:1240097/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             cAGAACCCCGAGGATAAACCCAGTTGCCGGTCCGCGATCACGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACCGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCGa                         <  2:1726844/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    ccaGGGGTAAAGCCACGTACCGCGCCGAGATCTCGCCAAGTCCTAACCTATTCATCGGCCTGGACGGACAACAGATCCACCACAACACGGTGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAAACGACTGGTCGAAAGATGACGACGGGCGAAACGTaa                  <  2:281746/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    acaGGGGTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCGAAACGTaa                  <  1:548017/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gTAAACCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCAAGTCATCAGTTCGCTACAGATAATCCATAATGCAACGTCAGCCAGCAATAAACGACTGCTCGAAAGTAGACGACAGGCGAAACGTAGGAGTAt            >  2:554251/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             aaCCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACCGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCGAAACGTAAGAGTATTaa         >  2:101913/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              aCCCAGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCGAAACGTAAGAGTATTaaa        <  1:1691961/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  aGTTGCCGCGCCGAGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACTGAGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTCGAAAGATGACGACGGGCGAAACGTAAGAGTATTAAAGtga    >  1:377247/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                     
GCGCACCTAACGTTGCGGTGACCACGCCAATAGGCAGCTCTGCGGCAGCTAATGCCAGGCGCGCTACAATATCGGCCAGCAGCAATGCGCTCGCCCCTGCCAGCGCGCAGCCGGGAAGTAATACGCGATGATCGGTTAAACCACA‑CAACCGGAGAATATGGGGGATCACCA‑GACCAATAAAGCCGATAGCACCCGCCAGCGCCACACTGACGCCAACCATCCAGCCGGTCGCTGCCACCAGCACATTGCGCCAGAACCACAGGGGTAAACCCAGTTGCCGCGCGCTGATCTCGCCAAGTGCTAACATATTCATCGGCCTGGACTGACAACAGATCCACAACAACACGGGGATCAATGCCAGCATCAGCCAGCTTTGCCGCCAGTCTACGCCGCCAAAACCGCCCATCATCCAGTACATCAGCTGACGCAAATCAACACTGGTGGAAAAGTAGATAGCCCACGTCATTAGTGCGCTACAGATAATCCCTAATGCAACGCCAGCCAGCAATAACCGACTGGTGCTAAGATGACGACGGGCGAAACGTAAGAGTATTAAAGTGATG  >  CP042583/1476161‑1476723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A