Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,491,583 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,491,583 | 0 | A | T | 99.6%
| 595.1
/ NA
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (146/104); minor base C (1/0); total (148/104) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,491,584 | 0 | G | C | 99.2%
| 586.7
/ NA
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (146/103); minor base A (1/1); total (148/104) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,491,585 | 0 | T | A | 98.0%
| 577.1
/ NA
| 252 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (142/102); minor base C (4/1); total (148/104) |
| Fisher's exact test for biased strand distribution p-value = 4.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 252 total aligned reads displayed.
CATAATGCTCTAAAGGAGAGGTTGTAATGAGTACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACAGTGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTAGTCTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGAGTCCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCAGCGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATAGCGTAAATGGCAT > CP042583/1491305‑1491863
|||
caTAATGCTCTAAAGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGa < 2:385452/289‑1 (MQ=255)
aTAATGCTCTAAAGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGaa > 1:1639518/1‑289 (MQ=255)
tGCTCTAAAGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAgaga < 1:1875959/289‑1 (MQ=255)
tctAAAGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGaca < 1:1386868/288‑1 (MQ=255)
ctAAAGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACg > 1:1898067/1‑289 (MQ=255)
aaaGGAGAGGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGGTATTGCCCGTGCCATTTTACTGGGTGAAGAGACACGt > 1:1553796/1‑288 (MQ=255)
gagGTTGTAATGTCAACCCAGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATCTCTCCCGTCGTACCGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCACGGCACCCGTGGAATGGGCACACCCGTCAGGAAGTAGTAGAACGGGGTATTGCCCGTGCCATTTCACTGGTTGAAGGGACGCGTCCattat > 2:703886/1‑289 (MQ=255)
agGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGCAGTAGTAGAACGGGTTATTGCCCGTTCCCTTCCACTGGTTGAAGAGACACGTCCattatt > 2:1562409/1‑289 (MQ=255)
agGTTGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACAGGTTCattttt > 2:611623/1‑289 (MQ=255)
tGTAATGTCAACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCa > 1:271759/1‑289 (MQ=255)
gtaatgtcaaCCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCAATTATTACCAg > 2:959227/10‑289 (MQ=255)
caaCCCCGCGTCAGATGCTTGCTGCAATTTTTGCTAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGAAGTGATGGCCAGCCTGGGGGTGGATCTCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATAGGGTGGTCGATCTGTGGTACGCCCGGCAACCGTGGAATGGGCCCAACCGGCAGGAAGTAGTAGAACGGGTTATTGCCCGTGGCATTTCACTTGTTGACGACACACGTCCCTTAGTACCAGGctttc > 2:1042710/3‑284 (MQ=255)
aaCCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACCCGTCCCTTATTACCAGGCGttcc > 2:1524224/2‑285 (MQ=255)
aaCCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCAGTCAGGAAGTAGTAGAACGGGTGATTGCCCGGGCCATTTCCCTGGTAGCAGAGGACCGTCCATTATTCACGGGCGTccgg > 2:1643781/2‑288 (MQ=255)
aaCCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTAAGAACCTCTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCCGGGGGTGGATATCTCCCGTCGTAACGAGTTGCCGTACACCTTAGGTTTACGCCTCGATATGGTCGACGATCTTTGGTACGCCCGGCAACCGCGGAATGTGCGTAGCCGTCAGGACGCAGTAGAGCGGGTATTTTCCCTTTCTCGTTCACGGGCTGAAGAGACACGGTCATTATTACCAGGCGTgca > 2:1095608/2‑287 (MQ=255)
cgTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGGAGGAGAACGGGTTATTGCGCGTGCCATTGCACTGGTTGAAGAGACACGCCCATTGTTACCAGGCGTGCGCGAAGCCg > 1:711356/1‑289 (MQ=255)
gTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTTCATTATTACCAGGCGGGCGCGGAGCCGt > 1:869333/1‑289 (MQ=255)
gTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCg < 1:850353/288‑1 (MQ=255)
aTTCTTGCGTCAACTTTTG‑TATGGGATGGATTACTTATCGCATCAGAACCTTTATGGGATCGGGCCGAACTGGCTGGGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATATTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCg < 2:80680/288‑1 (MQ=255)
gctgcAATTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCa < 1:1156706/289‑1 (MQ=255)
aTTTTTGATAT‑GGATGGATTACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAAc < 2:836790/289‑1 (MQ=255)
ttACTTATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGa < 1:1177873/288‑1 (MQ=255)
tATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGGTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTAACAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGc > 1:1353716/1‑288 (MQ=255)
tATCGACTCAGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATAAGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATtgg > 2:1145766/1‑278 (MQ=255)
cgactcagAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCa < 1:586608/250‑1 (MQ=255)
gactcagAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTcc > 1:1774906/7‑288 (MQ=255)
gactcagAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTcc > 2:914007/7‑288 (MQ=255)
atcaggaCCTTTATGGGATCGAGCCGAACTGGTGGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgc < 2:1181463/282‑1 (MQ=255)
tcagAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgcgt < 1:1711800/286‑2 (MQ=255)
agAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgcgtc > 1:1770233/2‑286 (MQ=255)
aaCCGTTAGGGGATCGAGCCGAACGGGATGTTATGGAAATCGTGGGAGTGTGTAACTCCCGGCGTAACGGGATGCCGGACGCCTTAGGTTTACGCATCGATATGGTGGTCAAGCTTTGGTACGCCCGGCAACCGTGAAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgcgtcac < 2:1771175/288‑5 (MQ=255)
ttATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGTAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGCGACACGTCCATTATTACCAGGCGTGCGCGAAGCAGTTTCGTTATGCCAAGAACAAGGTTTAATGGTTGGACTGGCCTCcgggtcacccctc > 2:941238/1‑277 (MQ=255)
ttATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTAc > 2:523640/1‑289 (MQ=255)
tATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACa > 1:681083/1‑289 (MQ=255)
tGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGG‑TTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACatat < 1:844699/289‑1 (MQ=255)
tCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACg > 1:267027/1‑195 (MQ=255)
tCGAGCCGAACGGGATGGGGTGGAAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCt < 2:271759/288‑1 (MQ=255)
aGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCa < 2:856213/233‑1 (MQ=255)
aGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGaa > 1:1645494/1‑289 (MQ=255)
gATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACAAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAATTGTTGAACagg > 2:1266642/1‑287 (MQ=255)
aTGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGCAGTGACACGTCCATTATTACCAGGCGTGCGCGATGCCGTTGCGTTATGCAAAGAACAAAGTTTATTGGTGGGATCGGCACACGCGTCACCACTACATATGCTGAAAAAAgattgatacatgt > 2:1606314/1‑277 (MQ=255)
aTGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGt > 1:1657796/1‑289 (MQ=255)
cAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAgtg > 1:1226799/1‑275 (MQ=255)
cAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAgtg < 2:1226799/275‑1 (MQ=255)
ggggTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACa < 2:219774/212‑1 (MQ=255)
ggggTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACa > 1:219774/1‑212 (MQ=255)
gTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGAc < 1:523640/288‑1 (MQ=255)
tAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCg > 2:491983/1‑287 (MQ=255)
aCGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGcctc < 1:1852569/289‑3 (MQ=255)
cTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGcctcggccg > 2:1796435/1‑282 (MQ=255)
cTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCt > 1:1388960/1‑289 (MQ=255)
tAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCtt > 1:331278/1‑288 (MQ=255)
tAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCtt > 1:1184008/1‑288 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAg > 1:1069378/1‑288 (MQ=255)
cGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGAATGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTTACCATGTTTGACTTACGCGACAGTTTCGATGCTCTCGCCTCGGCCGAAAAACTGCCTTACAGCaac > 1:48109/1‑287 (MQ=255)
cGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCTACAGTTTCGATGCCCTCGCCTCGTCCGAAAAACTGCCTTACAGCAACCCGCa > 2:1858369/1‑288 (MQ=255)
cGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCa > 1:1344828/1‑288 (MQ=255)
tatGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCg < 1:914007/289‑1 (MQ=255)
gatGGTGTTCGGTGTTTGGTACGCCCGGCAACCGTGGAATGGGCCAGGACGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCg < 2:950778/288‑1 (MQ=255)
tggtggTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCa < 1:1266642/289‑1 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCGAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAg < 2:328937/286‑1 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgcgt > 2:779546/1‑177 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCCTCCCCAAGtaa > 2:459245/1‑288 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGtat > 1:410622/1‑289 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCCCCGCGGCCGACAAACTTCCTTAACGAAAGCCGAATCCGCAAGtat > 2:1747197/1‑289 (MQ=255)
gtCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTAAATATGCTGGAATAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCGTCGCCTCGGCCGCACAACTGCCTTTCCGCCAGCCGCATCAGCAAGtat > 2:1686910/1‑289 (MQ=255)
gATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTGGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCCAGTatat > 2:166302/1‑288 (MQ=255)
ttcgttGGTACGCCCGGAAACGGTGGAATGGGCAAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATAtct < 2:1388960/285‑1 (MQ=255)
tCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGa < 1:1022332/222‑1 (MQ=255)
gCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCcgcgt > 1:955958/1‑162 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCg > 1:293920/1‑219 (MQ=255)
cccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCCCCAGTAAATCCCGCCTGCgcagc > 2:645964/1‑289 (MQ=255)
ccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTc < 1:1515751/156‑1 (MQ=255)
ccGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTc > 2:1515751/1‑156 (MQ=255)
ggCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAACaaa > 2:191232/1‑289 (MQ=255)
gCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGATTGCGCAGCaaa > 1:197777/1‑288 (MQ=255)
aCCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTTGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTg < 1:491983/289‑1 (MQ=255)
tGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACt > 2:1729007/1‑140 (MQ=255)
tGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAACCTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCg > 2:1029317/1‑289 (MQ=255)
gAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCCCGACTGCGCAGCAAAACTGGGCGtt > 2:130878/1‑289 (MQ=255)
aTGGGCGAAGCCGTCAGGAAGTCGTGGAACGGGTTATTGCCCGTGCCATTTAACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAGGCCGTTGCGTTATGCAAAGAACAAGGTTTAGTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGCCTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTg < 2:1897926/288‑1 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGAcc > 1:678451/1‑288 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGAcc > 2:133401/1‑288 (MQ=255)
ggCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGAcc > 1:662959/1‑288 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTggg > 2:283559/1‑279 (MQ=255)
gCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGAccc > 2:792888/1‑288 (MQ=255)
gCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCa > 1:1486460/1‑244 (MQ=255)
gCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCCCCAGTACATCTCCACTGCGCCGCAAAACTGGGCTTTGAccccccga > 2:1319487/1‑283 (MQ=255)
cGTCAGGTAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGAc < 1:17448/287‑1 (MQ=255)
tCAGGAAGTAGTAGACCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCaaaa < 1:1525339/265‑1 (MQ=255)
cAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCg < 2:572831/289‑1 (MQ=255)
ggAAGTAGTAGAACGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTCACCCTCTGACCTGCGTa > 2:1078746/1‑289 (MQ=255)
aaCGGGTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGa > 1:1802949/1‑289 (MQ=255)
ggTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGAttcg > 2:1827542/1‑286 (MQ=255)
gTTATTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAggttcgg > 1:782256/1‑283 (MQ=255)
aTTGCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGACAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGCCTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAgcgtcgggaa > 2:729589/1‑280 (MQ=255)
gCCCGTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATTCGGTAAATg < 1:1117781/289‑1 (MQ=255)
gTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTGCAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATTCGGTAAATGGCAt > 2:266678/1‑289 (MQ=255)
gTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCCGCAAAACCGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATTCGGTAAATGGCAt > 1:182405/1‑289 (MQ=255)
gTGCCATTTCACTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGTCACCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCTCGGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCCCTTACCTGCGTAGCGCTGGAAGATTCGGTCAATGGCAt > 1:1583822/1‑289 (MQ=255)
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CATAATGCTCTAAAGGAGAGGTTGTAATGAGTACCCCGCGTCAGATTCTTGCTGCAATTTTTGATAT‑GGATGGATTACTTATCGACAGTGAACCTTTATGGGATCGAGCCGAACTGGATGTGATGGCAAGCCTGGGGGTGGATATCTCCCGTCGTAACGAGCTGCCGGACACCTTAGGTTTACGCATCGATATGGTGGTCGATCTTTGGTACGCCCGGCAACCGTGGAATGGGCCAAGCCGTCAGGAAGTAGTAGAACGGGTTATTGCCCGTGCCATTAGTCTGGTTGAAGAGACACGTCCATTATTACCAGGCGTGCGCGAAGCCGTTGCGTTATGCAAAGAACAAGGTTTATTGGTGGGACTGGCCTCCGCGAGTCCACTACATATGCTGGAAAAAGTGTTGACCATGTTTGACTTACGCGACAGTTTCGATGCCCTCGCCAGCGCCGAAAAACTGCCTTACAGCAAGCCGCATCCGCAAGTATATCTCGACTGCGCAGCAAAACTGGGCGTTGACCCTCTGACCTGCGTAGCGCTGGAAGATAGCGTAAATGGCAT > CP042583/1491305‑1491863
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
