Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,512,464 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,512,4640AT99.5% 432.4 / NA 184intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (80/103);  minor base G (0/1);  total (80/104)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,512,4650CG100.0% 438.9 / NA 184intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (80/104);  total (80/104)
*CP0425831,512,4660TA99.5% 434.7 / NA 184intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (79/104);  minor base C (1/0);  total (80/104)
Fisher's exact test for biased strand distribution p-value = 4.35e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 184 total aligned reads displayed.

GGCGCGGCTAAAATCCATGCTAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGACTATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑GCTTTTGCTCAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGACATCACTTCGCTCAACGGGACG  >  CP042583/1512185‑1512745
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
                 tcgaaatgaagCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAACCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTCCTGCCGGTGTGTTCGTTACTGCGAAACAGCCTCGGCAATGCATTATACACATTCCGCTTTTTTGAAGGCTGAACCAACGTGCCgcagcg                                                                                                                                                                                                                                                                  >  2:1677822/8‑284 (MQ=255)
                 tcgaaaaGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGATAAACAGCGCCGGCAATCCGTTATAGACATTCAGCGCTTTTGAGGCGTGAACCAACGTGCCGAcgcg                                                                                                                                                                                                                                                                  >  1:710803/5‑289 (MQ=255)
                 tcgaaaaGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGAcgcg                                                                                                                                                                                                                                                                  >  2:1786858/5‑289 (MQ=255)
                 tcgaaaaGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGAcgc                                                                                                                                                                                                                                                                   >  2:71068/5‑288 (MQ=255)
                     aaaGAAGCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATa                                                                                                                                                                                                                                                               <  1:75014/288‑1 (MQ=255)
                       agaagCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGtt                                                                                                                                                                                                                                                            <  1:176913/289‑1 (MQ=255)
                       agaagCGTTTACCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGtt                                                                                                                                                                                                                                                            <  1:1113450/289‑1 (MQ=255)
                                 aCCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGa                                                                                                                                                                                                                                                 >  1:1177476/1‑289 (MQ=255)
                                 aCCGAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGAAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGa                                                                                                                                                                                                                                                 <  1:1787266/289‑1 (MQ=255)
                                    gAGGCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCg                                                                                                                                                                                                                                              <  1:1713921/289‑1 (MQ=255)
                                      gtcttttacAGAACGGTGAATAGCCGTGTTTGTCCCTCGCCCCGGGCATTTCAGCAACCACTTTG‑TCATTAACCTTGTCGAGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCTGGTCGAGAAACAGCGTTCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GCGATCGt                                                                                                                                                                                                                                             <  2:539890/280‑1 (MQ=255)
                                      ggCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGtt                                                                                                                                                                                                                                            >  2:865292/1‑289 (MQ=255)
                                       gCTTTGCCAGAACGGTGAATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTc                                                                                                                                                                                                                                           >  1:1239459/1‑289 (MQ=255)
                                                 aacggtgaataGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAAcc                                                                                                                                                                                                                                  >  1:1580195/9‑288 (MQ=255)
                                                  acgtggaataGCCGGGTTCGCCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGc                                                                                                                                                                                                                                <  2:1430523/282‑1 (MQ=255)
                                                  acggtgattaGCCGTCTACGCAAATCCCCCCGCGCATTTCACAAACCCCGTTG‑TCATTCGACTGGTCGCGAAACGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCGTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGc                                                                                                                                                                                                                                <  2:1186583/281‑1 (MQ=255)
                                                      tgaataGCCGTGTTCGTCAACCACCCCGCGCATTTCAACAACCCCTTGG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCAc                                                                                                                                                                                                                             <  2:613758/285‑1 (MQ=255)
                                                      atactcgCCTTGTTCGGCAACCACCCCGCGCATTTCAGCAACCACTTGG‑TCATACACCTTGTCGACTAAAGCCGCCATAAACATACA‑GCT‑CGATTTCTGCAGCGAATAGCCGTTGCACTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGTTGTGATCGTTACTGAGAATCAGCGGCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCAc                                                                                                                                                                                                                             <  2:243671/282‑1 (MQ=255)
                                                                  ttCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCCCAATGGcccca                                                                                                                                                                                                                >  2:1270274/1‑285 (MQ=255)
                                                                       cAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATcc                                                                                                                                                                                                            >  2:1265726/1‑288 (MQ=255)
                                                                            aCCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCa                                                                                                                                                                                                      <  2:675514/289‑1 (MQ=255)
                                                                               ccGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACgg                                                                                                                                                                                                   >  1:1831249/1‑289 (MQ=255)
                                                                                 gcgcATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGt                                                                                                                                                                                                  >  1:537883/1‑288 (MQ=255)
                                                                                  cgcATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGc                                                                                                                                                                                                <  2:82853/289‑1 (MQ=255)
                                                                                    cATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCTAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTg                                                                                                                                                                                                 >  1:90393/1‑286 (MQ=255)
                                                                                        tCAGCAA‑CACATTGTTCATTAAACTTGTCGCGAAAAGCGGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCGTTGCGCCAGTCCGGGTCGAGAAACAGCGTGAACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGtct                                                                                                                                                                                          <  2:1772947/289‑1 (MQ=255)
                                                                                            cAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      >  1:572146/1‑289 (MQ=255)
                                                                                            cAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  1:1021242/289‑1 (MQ=255)
                                                                                             aaCCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  1:1742127/288‑1 (MQ=255)
                                                                                             aaCCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  1:1906563/288‑1 (MQ=255)
                                                                                             aaCCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  1:1280053/288‑1 (MQ=255)
                                                                                                     tG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAg                                                                                                                                                                             <  1:642298/289‑1 (MQ=255)
                                                                                                      gttCATGAACCTTGTAGCGAAAAGCCGCCATAACCATAAAGGCC‑GATTTCG‑ACAGCAAATAGCCGTTGCCCTCTTTGAGCCAGTCCGGGTCGAGAAAAAGCGTGCTCAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATGCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAg                                                                                                                                                                             <  2:1856570/287‑1 (MQ=255)
                                                                                                         cATTAACCTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGGGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCAc                                                                                                                                                                          <  1:1367831/289‑1 (MQ=255)
                                                                                                         cATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCa                                                                                                                                                                           <  1:660565/288‑1 (MQ=255)
                                                                                                          aTTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  1:1171487/276‑1 (MQ=255)
                                                                                                          aTTAAACTGGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACg                                                                                                                                                                         <  2:572146/289‑1 (MQ=255)
                                                                                                           ttaaactggcgggaaaaaGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  2:897264/275‑1 (MQ=255)
                                                                                                           ttAAACTTGTCGCGAAACGCGGCCTTAAACATAAA‑GCG‑CGATTTCGAAAGCAACTAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACGGCGTGAACAGCTGGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCATCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  2:122011/289‑1 (MQ=255)
                                                                                                           ttAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        >  1:1019615/1‑289 (MQ=255)
                                                                                                           ttAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCAAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  1:474438/289‑1 (MQ=255)
                                                                                                           ttAAACTGGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  1:826542/289‑1 (MQ=255)
                                                                                                           taaaaCTTGTAGCAAAAAGCCGCCATAAACAAAAA‑GCG‑CGATTCAGACAGCAAATAGCCCTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  2:1136815/287‑1 (MQ=255)
                                                                                                                acactagcgAAAGGCCGCCATGAACGATAA‑GCGCGCATTCG‑ACAGCAAATAGCCGTTGCCGTCTGTGCGCGAGTCCGGGTCGGGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAAcaca                                                                                                                                                                   <  2:403121/283‑1 (MQ=255)
                                                                                                                  tGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTCTCTTCCAGCACCAAcacaaa                                                                                                                                                                 >  2:946428/1‑287 (MQ=255)
                                                                                                                   gTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGTCACAAACCCCCGCCCCGGTCCCTGTCCCGCTCTCTTCCACCACGAACACATa                                                                                                                                                                 >  2:1101175/1‑288 (MQ=255)
                                                                                                                    tCGCGAAAAGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCa                                                                                                                                                                                                      <  1:1746483/250‑1 (MQ=255)
                                                                                                                     cgcgAAAAGCCACCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGcc                                                                                                                                                              <  1:29960/289‑1 (MQ=255)
                                                                                                                          aaaGCCGCCATAAACATAAA‑GCG‑CGATTTCGACAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCt                                                                                                                                                         <  1:865292/289‑1 (MQ=255)
                                                                                                                                                     atttcgacAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCCGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCa                                                                                                                                >  1:489946/8‑289 (MQ=255)
                                                                                                                                                                 aatggcctgtggccTCTTGGCGCCATGCCGGGGCGAGAAACGGCGGTCACAGCTCGCTGATGCCGGTTTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCGCCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGc                                                                                                                    <  2:1080270/277‑1 (MQ=255)
                                                                                                                                                                         ttGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATCGCCCTTCTCCCTTTTGGCCAGTTCGCCTTGCCAGGTTTTGCTTCCCCTTTCGa                                                                                                            >  2:874247/1‑289 (MQ=255)
                                                                                                                                                                         ttGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGTCAGTTCGCCTTGCCAGGTTTTGATTTCCCTTTcca                                                                                                            >  2:913480/1‑287 (MQ=255)
                                                                                                                                                                         ttGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGa                                                                                                            >  1:107137/1‑289 (MQ=255)
                                                                                                                                                                         ttGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGa                                                                                                            >  1:151044/1‑289 (MQ=255)
                                                                                                                                                                              ctctTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATAcgc                                                                                                       >  1:1133215/1‑289 (MQ=255)
                                                                                                                                                                                 tttGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        >  1:613225/1‑221 (MQ=255)
                                                                                                                                                                                 tttGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  2:613225/221‑1 (MQ=255)
                                                                                                                                                                                           tCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCCCAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGCTTGCCCTTTCGATAcccgccgaacgcgtg                                                                                           >  2:1580422/1‑278 (MQ=255)
                                                                                                                                                                                           tCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTggg                                                                                                                                               >  1:975816/1‑236 (MQ=255)
                                                                                                                                                                                           tCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCCGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTgg                                                                                          >  1:709706/1‑289 (MQ=255)
                                                                                                                                                                                                     gaAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCATGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCCCTTTTGGCCAGTTCGCCTTCCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTgcc                                                                                >  2:207286/1‑287 (MQ=255)
                                                                                                                                                                                                       aaCAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATtggtgg                                                                              <  1:1270274/289‑1 (MQ=255)
                                                                                                                                                                                                            cGTGCCCAGCTCGCTGCTGCCGGTGTGTTCGTTACTGAGAAACAGGGTCGGCAATGCGTTATAGAAATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAg                                                                          <  2:1716653/288‑1 (MQ=255)
                                                                                                                                                                                                              tGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGtt                                                                                                                                                                                                                                                            >  2:1138429/1‑109 (MQ=255)
                                                                                                                                                                                                              tGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGtt                                                                                                                                                                                                                                                            <  1:1138429/109‑1 (MQ=255)
                                                                                                                                                                                                                    gCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAATCGTGGCTTCATTGGCGGGacgccacctcgg                                                                 >  2:1175494/1‑278 (MQ=255)
                                                                                                                                                                                                                     cTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGa                                                                                                                                                                                                                                                 >  1:1442166/1‑112 (MQ=255)
                                                                                                                                                                                                                     cTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGa                                                                                                                                                                                                                                                 <  2:1442166/112‑1 (MQ=255)
                                                                                                                                                                                                                      tCGCTGCTGCCGGTTTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGgc                                                               <  1:597283/289‑1 (MQ=255)
                                                                                                                                                                                                                           gctgcCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGAtt                                                                                                                      >  1:20566/1‑229 (MQ=255)
                                                                                                                                                                                                                             tgcCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGgccgccgc                                                         >  1:232526/1‑288 (MQ=255)
                                                                                                                                                                                                                               ccGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCCCAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATACCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGTGTTTGATTGCCCTTCCGTTACCCCCCTGAACCTTTGCTTCCTTGGCGGGAATCCACGTCAGCCCCCCTccc                                                       >  2:1129603/1‑288 (MQ=255)
                                                                                                                                                                                                                                        tCGTTACTGAGAACCAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTGGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTgg                                             <  1:397688/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGCAGCGACGTCAGGCCGCCGCCCGTTTTGCTgg                                             >  2:765369/1‑288 (MQ=255)
                                                                                                                                                                                                                                          gTTACTGGGAAACAGTGCCGGCAATGGGTTATAGGATGTCGGACCTTTTGAGGCGTGACACAGCGTGCCGACGCGATAGTTGTACCA‑GGGATCTTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCa                                           <  2:296645/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aCTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCCGGCCGCCGCCCGTTTTCCTGGCAAg                                         >  2:940960/1‑288 (MQ=255)
                                                                                                                                                                                                                                               tGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        <  1:1740361/159‑1 (MQ=255)
                                                                                                                                                                                                                                                 agaAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTg                                                                                           <  1:333911/235‑1 (MQ=255)
                                                                                                                                                                                                                                                 agaAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTg                                                                                           >  2:333911/1‑235 (MQ=255)
                                                                                                                                                                                                                                                    aaCAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAt                                   <  1:1265726/287‑1 (MQ=255)
                                                                                                                                                                                                                                                     aCAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGa                                                                                                                                                                        >  2:531741/1‑153 (MQ=255)
                                                                                                                                                                                                                                                      cAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCCCCGCCCGGTTTGCTGGCAAGCCGCATCat                                >  2:153120/1‑287 (MQ=255)
                                                                                                                                                                                                                                                        gCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCt                                                                                                                                                                                      <  2:1314090/136‑1 (MQ=255)
                                                                                                                                                                                                                                                          gTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg                           <  1:1400578/289‑3 (MQ=255)
                                                                                                                                                                                                                                                          gTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg                           <  1:169321/289‑3 (MQ=255)
                                                                                                                                                                                                                                                          gTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgc                             <  1:930330/287‑1 (MQ=255)
                                                                                                                                                                                                                                                           tCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg                           <  2:1740938/288‑3 (MQ=255)
                                                                                                                                                                                                                                                                     gTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATctgat                <  1:1727510/289‑5 (MQ=255)
                                                                                                                                                                                                                                                                          aGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTc           <  1:946428/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCa                                                                                                                                                                                                      <  1:1272972/98‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACg                                                                                                                                                                         <  2:1377687/127‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACg                                                                                                                                                                         >  1:1377687/1‑127 (MQ=255)
                                                                                                                                                                                                                                                                              aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGc                                                                                                                                  <  1:1233168/166‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACg       <  1:431007/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg                           >  2:877177/1‑265 (MQ=255)
                                                                                                                                                                                                                                                                                tCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg                           <  1:877177/267‑3 (MQ=255)
                                                                                                                                                                                                                                                                                tCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACggg     >  1:1221627/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 cAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACggg     >  1:529436/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 cAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGa    <  2:189251/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
GGCGCGGCTAAAATCCATGCTAAAGAAGCGTTTACCGAGGCTTTGCCAGAACGGACTATAGCCGTGTTCGTCAATCACCCCGCGCATTTCAGCAACCACTTTG‑TCATTAAACTTGTCGCGAAAAGCCGCCATAAACATAAA‑GCG‑GCTTTTGCTCAGCAAATAGCCGTTGCCCTCTTTGCGCCAGTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCA‑GGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGACATCACTTCGCTCAACGGGACG  >  CP042583/1512185‑1512745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A