Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,512,719 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,512,719 | 0 | G | C | 99.6%
| 560.3
/ ‑5.3
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (113/121); minor base . (1/0); total (114/121) |
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,512,720 | 0 | C | G | 99.6%
| 543.8
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (113/121); total (114/121) |
| Fisher's exact test for biased strand distribution p-value = 4.85e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 |
| * | CP042583 | 1,512,721 | 0 | T | A | 98.3%
| 530.7
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (109/120); minor base G (3/1); total (114/121) |
| Fisher's exact test for biased strand distribution p-value = 3.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 235 total aligned reads displayed.
GTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGA‑CATCACTTCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAATTATTTCAACTACTACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTA > CP042583/1512443‑1513000
|||
taGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATctgatcgct < 1:153120/289‑9 (MQ=255)
aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACg < 1:431007/289‑1 (MQ=255)
tCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACggg > 1:1221627/1‑289 (MQ=255)
cAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGa < 2:1831249/289‑1 (MQ=255)
gcttttgaggCGTGAACCAACGTGCCGACTCGATAGTGGTACCCGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGAc < 2:1268386/278‑1 (MQ=255)
ttttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCTCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑ACTCTGATCGCTCAACGGCACGGATg > 2:226850/7‑289 (MQ=255)
gCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACcatc < 1:1111295/288‑1 (MQ=255)
tGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCatga > 1:1149647/1‑289 (MQ=255)
aaCCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCCGGCCGCCGCCCGTTTTTCTGGCAAGCTTCCTCAGCGC‑CGGAGCAACTGACCGCGCAACGGGACGGATTCCCATCacgatg > 2:1398446/1‑289 (MQ=255)
aaCCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCCGGCCGCCGCCCGTTTTGCTGGCCAGCTGCATCAGCCCCGAGC‑CATCTTATCGCTCAACGGGACGGCTGACcatcagtatg > 2:1119772/1‑284 (MQ=255)
aCGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCACAAACGCCACCTCAATGGCACAAATCACCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACATTTTCGCAGTTCGCCTTGCCAGGTTTTGATTGCCATTTCGATACGCGCCGAACGCGTGGCTTCATGTGCGGGAAGAGACGTCAGGCCGCCCCCCGGTTTACTGGCAAGCTGAATCAGCGACGAGA‑CATCCGATCGCCCACCAGGACGCATGCCCATCACGAAGAAcc > 2:1899145/1‑288 (MQ=255)
cGTGCGGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGAACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCAAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCACCGTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTC < 1:1160042‑M1/289‑1 (MQ=255)
ccAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaag < 1:860488‑M1/289‑12 (MQ=255)
ccAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaa > 1:882535‑M1/1‑278 (MQ=255)
gggATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCGGGCAATCTGCATCAGCGCCGAGA‑CGTGTGATCGCTCAACGGGACGGATGACCATCCTGACGAACCTCGGCTAACAAAgtgttcgcagtca > 2:1350623‑M1/1‑275 (MQ=255)
gggATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCCCCCGTTTTGCTGGCAAGCTGCCTCAGCCCCGACA‑CATCTTCTCGCCCAACGGGACGGATGACCCTCCTGATGAACCTCGGCTAACAAAttgttctcaagca > 2:23923‑M1/1‑275 (MQ=255)
gATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagca > 1:1836393‑M1/1‑273 (MQ=255)
gATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagca > 2:162662‑M1/1‑273 (MQ=255)
tCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctg < 1:765369‑M1/288‑18 (MQ=255)
cGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgca > 2:433265‑M1/1‑270 (MQ=255)
cccAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCCCCACGGGACGGGTGCCCATCACGATGAACCTCCGCTAACAAAgtggtcccaagcagctgcacagcga > 2:542663‑M1/1‑263 (MQ=255)
ccAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatc < 1:945375‑M1/289‑28 (MQ=255)
aCCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccgg > 1:1676408‑M1/1‑253 (MQ=255)
aCCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgaaccagtccgg > 1:706688‑M1/1‑253 (MQ=255)
tCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgt < 1:542663‑M1/289‑40 (MQ=255)
aaTGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGTTGACCATCATGATGAACCTCGGCTAACAAAtcgttcgcaagcagctgcaaaccgacccagtccggtcgcc > 1:1728923‑M1/1‑248 (MQ=255)
aaTCCCCGCCACGGTGCCTGTCTCGCTCTCTTCCCGCACGAACCCTTCGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttctt < 2:1220550‑M1/289‑51 (MQ=255)
ccccGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATCCGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgc < 1:1860915‑M1/289‑54 (MQ=255)
cGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcggcccctcttcttcgctg > 1:1710876‑M1/1‑233 (MQ=255)
cGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTCCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctg > 1:440296‑M1/1‑233 (MQ=255)
tGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgag < 1:242058‑M1/288‑64 (MQ=255)
gCCTGGCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCGGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcg < 2:1183945‑M1/289‑66 (MQ=255)
ccTGTCTCGCTATCTTCCAGCACGACCACATAGCCCTGCTCGCTGTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgc < 2:1881726‑M1/289‑67 (MQ=255)
ccTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGTCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCAACATGATGAACCCCGGCTAACAACgtgttctccagtagctgcaaagccatccagtacggtcgtacccccttcttccctgcacttgaacg > 2:1593755‑M1/1‑223 (MQ=255)
gCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaa > 1:98411‑M1/1‑215 (MQ=255)
gCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaa < 1:482994‑M1/289‑75 (MQ=255)
aTCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaac < 2:882535‑M1/289‑78 (MQ=255)
ttCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCATGTTTTTATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgca < 1:1899145‑M1/289‑81 (MQ=255)
ttCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCTGCTAACAAAgtgttcgcaagcagctgcaacgcgagccagtccggccgtcacctcttcctcgctgacattgatcgccagccacaaacgc > 2:1423771‑M1/1‑209 (MQ=255)
ttCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgc > 1:1136591‑M1/1‑209 (MQ=255)
cGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgtt > 1:1376905‑M1/1‑201 (MQ=255)
cGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcaccctctcctcgctgacattcagcgcaggcgccaaacacaccacctt > 2:1010546‑M1/1‑201 (MQ=255)
cGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAT‑AGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgc < 1:314490‑M1/289‑90 (MQ=255)
aaCACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgcc > 1:1277074‑M1/1‑199 (MQ=255)
aaCACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgc > 1:369587‑M1/1‑199 (MQ=255)
aaacataGCCGTGATCACTGTTGGGCAGTTCGCCTGCCCAAGTTTTGAGTCACCTTTCGATACGCGCCGAAAGCGTGCGTGTATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtgcggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgc < 2:1716669‑M1/285‑90 (MQ=255)
acaTAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacc < 2:529436‑M1/289‑94 (MQ=255)
acaTAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgc < 1:1214344‑M1/285‑90 (MQ=255)
caTAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccaccc < 1:147276‑M1/289‑95 (MQ=255)
ccgtgccCACTTTTGGGCAGTTGGCCTTGCCGGGTTTTGATTGCCCTTTCGATACGAGCCGAACGCGTGGCTTCATGGGCGGGAAGCGACGTCCGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 2:1042970‑M1/286‑100 (MQ=255)
ccccGCTCACTTTTGGCCATGTTGCCTTGCCAGGTTTTGGTTGCCCTTTCGATACGCTCCGAAAACTTGGCTTCATTGGCGGGAAGCGACGTCCGGCCGCCGACCGTTTGGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTAAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 2:1661072‑M1/289‑100 (MQ=255)
ccTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 1:84713‑M1/288‑100 (MQ=255)
cTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcacagcgatccagtccggtcgtcaccccttcttcgcttacattgaccgcatgcccaaaccgcaccccgttgccaccccgactca > 2:1499013‑M1/1‑188 (MQ=255)
cTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatca > 1:1443589‑M1/1‑188 (MQ=255)
gCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATTACCATCATGATTAACCTCGGCTAACAAAgtgttcgcaagccgactcaaagggatccagtccggtcgtcacctcttcttcgctgacattgagcccaggcggaaaacgccccacgttgccacccccactcagg > 2:1581369‑M1/1‑186 (MQ=255)
gCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt > 1:1342225‑M1/1‑186 (MQ=255)
gCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt > 1:277249‑M1/1‑186 (MQ=255)
acgaactttTTGGCGGCTCGCCGTGCCATGTTTTGATTGCCCTTTGGGTACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGACAGGCCGCCGCCAGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACACAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt < 2:709706‑M1/285‑104 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGa < 2:1462118/158‑1 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGa > 1:1462118/1‑158 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt > 1:673049‑M1/1‑185 (MQ=255)
tCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCatga > 2:1325379/1‑166 (MQ=255)
tCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgccaaacgcaccacgttgccacccgcaatcagta > 1:520269‑M1/1‑184 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccat > 2:949453‑M1/1‑180 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccat > 1:240240‑M1/1‑180 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACCGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgaccgtgagcgcaggcgcaaaacgcccccccttgccacccgcaatcaataacat > 2:628770‑M1/1‑180 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCCCAACGGGACGGATGACCAGCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacactgagcgcaggcgcaacacgcaccaccttgccacccccaacccgtaccat > 2:593414‑M1/1‑180 (MQ=255)
aGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcct > 2:1524585‑M1/1‑172 (MQ=255)
ttCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCCCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGGGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttctcaagcagccgcaaagcgatccagtccggtcgccacctcttcttcgctgacattgagcgcaggcccaaaacaaaccacgttgccaaccgcacccagttccatcaaccctgatt > 2:1377791‑M1/1‑170 (MQ=255)
ccTTGCCAGGTTTTGATTGCCCTTCCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgc < 2:652113‑M1/289‑124 (MQ=255)
cTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgc < 1:1868677‑M1/288‑124 (MQ=255)
cAGGTATTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgctt < 1:1434712‑M1/288‑129 (MQ=255)
ttttGATTGCCCTTTCGATACGCGCCGAAAGCGTTGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTTGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcct < 1:1599976‑M1/287‑132 (MQ=255)
tGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGCCCGCCGCCCTTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcacctcgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagag < 1:1089965‑M1/289‑137 (MQ=255)
cacgcgccgaacgcgtggcttcattGGCGGGAAGCGACGACGGGCCGCCGCCCGTTTTGCTGGCAAGCGGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAATCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggctcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgc < 1:1398480‑M1/277‑152 (MQ=255)
cgaaagcgTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgt < 1:1591971‑M1/286‑159 (MQ=255)
aaGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaat < 2:191852‑M1/289‑162 (MQ=255)
cGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcg < 2:1136591‑M1/288‑164 (MQ=255)
cGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcg < 2:369587‑M1/288‑164 (MQ=255)
gTGGCTTCATTGGCGGGAAGCGCCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcg < 1:100229‑M1/287‑164 (MQ=255)
gTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggc < 1:1789696‑M1/289‑166 (MQ=255)
tGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat > 2:807971‑M1/1‑123 (MQ=255)
tGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 1:807971‑M1/222‑100 (MQ=255)
cTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcatt < 1:342638‑M1/288‑169 (MQ=255)
cTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcatt < 2:326513‑M1/288‑169 (MQ=255)
ttCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattc < 1:1010546‑M1/288‑170 (MQ=255)
ttGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtac > 1:1617597‑M1/1‑115 (MQ=255)
cGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacaca > 1:1044727‑M1/1‑111 (MQ=255)
gggaagcgacgtcaggccgCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacag > 1:9976‑M1/10‑110 (MQ=255)
gcgacgtcaGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatc > 1:167826‑M1/5‑105 (MQ=255)
gacgtCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgattcgcttgcccggcgtaatcggcattcagtacacagccaatcag < 2:155638‑M1/287‑187 (MQ=255)
ccgccCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagcc > 1:609307‑M1/1‑91 (MQ=255)
cGTTTTGCTGGCAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaa < 1:1119772‑M1/289‑204 (MQ=255)
cAAGCTGCATCAGGGCCGGGA‑CATCGGATCGCTCAACGGGACGGATGACCATCATGATGAACATCGGCTAACAAActggtcgcaagcagctgcaaagcgatccagtccggtcgtcacctattcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaa < 2:1156009‑M1/288‑214 (MQ=255)
cAAGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGGCGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaa < 1:940960‑M1/288‑214 (MQ=255)
aaGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaaca < 2:459738‑M1/289‑216 (MQ=255)
aaGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaaca < 1:462088‑M1/289‑216 (MQ=255)
aaGCTGCATCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaaca < 1:207286‑M1/289‑216 (MQ=255)
tCAGCGCCGAGA‑CATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaacaaaccatag < 2:673049‑M1/289‑224 (MQ=255)
tCAGCGCCGAGA‑CATCGCGTCGCTGCACGGGACGGATGACCATCATGATGAACCTCGGATAACAAAgtatgcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctgagagatctgtttcgcttgcccggcgtaatcggcattcagtacacagccaatcagcaaacctaagccgcgaacttcactgaacaaaccatag < 2:813622‑M1/289‑224 (MQ=255)
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GTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCAGCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGA‑CATCACTTCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAATTATTTCAACTACTACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCATCACGCCTGCTTTCGCCGCTTCCTGAGAGATCTGTTTCGCTTGCCCGGCGTAATCGGCATTCAGTACACAGCCAATCAGCAAACCTA > CP042583/1512443‑1513000
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
