Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,513,911 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,513,911 | 0 | G | C | 99.4%
| 384.7
/ ‑6.3
| 163 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (42/120); total (42/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 |
| * | CP042583 | 1,513,912 | 0 | C | G | 99.4%
| 378.5
/ NA
| 163 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (42/120); total (42/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 |
| * | CP042583 | 1,513,913 | 0 | T | A | 99.4%
| 383.3
/ ‑4.8
| 163 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (41/120); minor base G (0/1); total (42/121) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 |
Only 100 of 163 total aligned reads displayed.
CGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGGCTAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCATATAAAGTGAATACGTTTG > CP042583/1513631‑1514191
|||
cGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTAGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGAAATGCCAACCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCAACAAGCGCGAAC‑CTTc > 1:1735637/1‑289 (MQ=255)
aGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGc < 1:62551/288‑1 (MQ=255)
ggTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCa < 1:1270516/287‑1 (MQ=255)
gTCCTGGGCGAATTGACGGGCCAGTTTTCGCTCCGATGCGTTGGCTTCCGCACCGGGGTGACAAAGGAAGACGCGAACGGCAAACGGGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCGCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACg < 2:1908512/288‑1 (MQ=255)
ggtgcgggAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGAACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTa < 2:1159103/281‑1 (MQ=255)
cGTGGGCGAATTTGCGCGCCCGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTa < 2:902679/288‑1 (MQ=255)
cGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTTCCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTa < 1:505573/288‑1 (MQ=255)
cGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAc < 1:1134862/289‑1 (MQ=255)
cGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAc < 1:201758/289‑1 (MQ=255)
gTGAGCGAATTTACGCGCCAGTTTTAGCGCCGTTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAcc < 1:1550628/289‑1 (MQ=255)
gTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGGTCACCGCAATGCCACCCGCGCAGTCGATCTACCCCTTCCCCTGCTGATCCCACACGCGCGAAC‑CTTccgccccgcc > 2:1645735/1‑279 (MQ=255)
tGAGCGAATTTACGCGCCATTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCATAACTTACGCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAcc < 1:655257/288‑1 (MQ=255)
ggAGCGAATGTACGCGCTAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAcc < 1:279326/287‑1 (MQ=255)
gAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGtata < 1:1250673/289‑1 (MQ=255)
aaaTTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGtata < 1:1804064/288‑1 (MQ=255)
tctaaggcgcGAGTTTTCGAGCCGCGTCGTTGGCGTCCCAACCGGGGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATaaa < 2:1583581/283‑1 (MQ=255)
aTTTTCGCTCCAGTTTTATCGCCGCTTTGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATaaa < 1:1065628/289‑1 (MQ=255)
aTTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTCGCGGCTCGTTGGTGTAACCGT‑TGACGGTATGCCCGAACTTAATCGCCTGTTCGTTCCTCGCTTCACGCACTTCCAGATGCCCATGGCCCCGCCCGTCCACCCCCATTCTCCCCGCGGTGTCCGACTACCCGTTCCCCTGCTGCTTCCACCACCGCGCAC‑CCTCGCCAcctgcccgcatac > 2:920628/1‑276 (MQ=255)
aTTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATaaa > 1:403794/1‑289 (MQ=255)
caaGTTTTAGGGCCACTTCGTTGGCTTTCGGACCGGGGTTAGAAAGGAAGACGGGACCGGCAAACGTTGCGTCGATCATTTTTTTGGCCAGTCGCAGTACCGGCTGGTTGGTGTAACCGT‑TGCCGGTATGCCAGGACTTACTCGCGTGGTCGTTCAGCGCTTCACGCAGTGCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGGAGTCGATATACTCTTTCCCCTGCGGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCg < 2:1774785/286‑1 (MQ=255)
gtttggggccgcTTCGTTGGGTTCCGCACCGGAGTTACAAAAGAAGAAGCGATCGGAAAACGTGGCGTCGATCCATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCg < 2:1744089/282‑1 (MQ=255)
ttAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTa < 1:1347828/289‑1 (MQ=255)
ggcgcCGCTTCGTTGGCTTCCGCACCTGGGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGGCGATCAATTTTGTCGCCAGTCGCAGTACCGGCTGGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTaaa < 2:1247316/288‑1 (MQ=255)
aGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTaaa < 1:579248/289‑1 (MQ=255)
aGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTaaa < 1:1235247/289‑1 (MQ=255)
aGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTaaa < 1:697204/289‑1 (MQ=255)
gggccgcTGCGGGGGCGGCCGCACCGGGGGTAGAAAAGAGGGCGGGATCGGCAAACGTGGGGTCGATCGATGTTTTGGCGAGTCGGAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTaaa < 2:1169836/286‑1 (MQ=255)
gcgcCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAAc > 1:1050652/1‑289 (MQ=255)
cgccgcTTCGTTGGTTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAAc < 1:32250/288‑1 (MQ=255)
cgccgaTTCGTTGGCTTCCGAACCGGAGTTAAAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAAc < 2:1670640/288‑1 (MQ=255)
gccgcTTCCTTGGCGTCCGCACCGGAGTTACAAAAGATGACGCGATCGGCAAACGTGGCGTCAATCAATTTGTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAg < 2:1735637/289‑1 (MQ=255)
cgcTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGt > 2:1297235/1‑289 (MQ=255)
ttCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCTC‑TGCCGGTATGCAAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGTTGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGACATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCCGTATAAAAGGTGCCGGAGCGTAAACTAGTAACATCCAttaa > 2:1112508/1‑287 (MQ=255)
gAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGttt > 1:309569/1‑288 (MQ=255)
aagaagACGCGACCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGTTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTaa < 1:1112508/289‑1 (MQ=255)
cgcgATCGGCAAACGTTGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCt < 1:814427/288‑1 (MQ=255)
cgcgATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCt < 1:1505012/288‑1 (MQ=255)
tCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGAc < 2:1050652/288‑1 (MQ=255)
ggCAAACGTGGCGTCGATCAATTTTTTCTCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATa < 1:1443886/289‑1 (MQ=255)
ggCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATa < 2:1577736/289‑1 (MQ=255)
ggCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATa < 1:51497/289‑1 (MQ=255)
gCAAACGTGGCGTGGATGAATTTTTTCGCCGTTCGCAGTACCGGTTCGTTGGGTTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATa < 2:1796255/288‑1 (MQ=255)
cAACCGTGGCGTGGTTGAATTTTTACGGCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGATCTTACTCGCCTGTTCGTGCAGCGCTTCACGCAGTTCCGGATACGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGc < 2:234590/289‑1 (MQ=255)
cAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAc < 1:819265/211‑1 (MQ=255)
cAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACCCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAc > 2:819265/1‑211 (MQ=255)
aaaCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGc < 2:470809/288‑1 (MQ=255)
aaaCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGc < 1:73139/288‑1 (MQ=255)
aaaCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGc < 1:130995/288‑1 (MQ=255)
aCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCTTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGAc < 1:983504/289‑1 (MQ=255)
aCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGAc < 2:61617/289‑1 (MQ=255)
aCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGAc < 2:931945/289‑1 (MQ=255)
aCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGAc < 1:1355195/289‑1 (MQ=255)
aCGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGAc < 1:1600142/289‑1 (MQ=255)
gTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACGCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACct < 2:1024525/289‑1 (MQ=255)
cGTCGATCAGTTTTTTCGCCATGCGGAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTa < 2:310192/288‑1 (MQ=255)
gTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACa < 1:1339740/289‑1 (MQ=255)
gTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGACCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACa < 1:1807183/289‑1 (MQ=255)
gATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCCACCATTCATCAAAGTTTTCACGCGTAATTGGACGAGACATACCGCACTCTACCGTa > 2:1280961/1‑289 (MQ=255)
aTCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGtata > 2:1493306/1‑204 (MQ=255)
aTCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTaa > 1:1408399/1‑289 (MQ=255)
ttttCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTTCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAA‑GGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCg < 2:427713/289‑1 (MQ=255)
tttCGGCAGTAGCAGTAACGGCTCGTTGGTGT‑ACCGTGCGCCGGTATGCCAGAACTTACTCGGCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCg < 2:1302665/289‑1 (MQ=255)
tttCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCg < 1:1402691/289‑1 (MQ=255)
tttCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCg < 2:1222633/289‑1 (MQ=255)
tttCACCAGCAGTAGTACCGTCTCTGTTGTGTAATCGT‑TGACTGTATGCCAGAGCTTACTCTCCTCTTCGTTCAGAGCTTCACGCATTTCCTGATTCGCATGGACCAGCACGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAGGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCg < 2:83276/289‑1 (MQ=255)
cGGCTGGTTGGTGAATACGG‑TGACGCTAAGCAAAAACTGTCTGTCCTGTTCGTTCAGCTCTTCACGCAGTTACGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTAGATATACTCTTTCCCCTGCTGATCCCACAAGCACGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTtaataa < 2:145910/289‑1 (MQ=255)
gCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTtaataata > 1:419567/1‑289 (MQ=255)
cGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGt < 2:1731305/289‑1 (MQ=255)
ttGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACct < 1:926831/247‑1 (MQ=255)
ttGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTaa > 1:836859/1‑289 (MQ=255)
ggTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATg > 1:333769/1‑289 (MQ=255)
aaCCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTgc < 1:920628/289‑1 (MQ=255)
ccGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTgcgc < 2:1408399/289‑1 (MQ=255)
gtGCCGGGATGCCAGACGATACGCGCCTGTTCATGCACGGATGCACGCAGTGCGTGATGCGCAGGGCCCAGCCCGTTCACCGCAATACAACCCGCGACGTCGATAGACACTTTCCCCTGCTGATCCCGCCAGC‑GCGACACTTCGCCACATACAGGTAAAAAGGGTGCCGGAGCGTAAACAGGTAGCCTCAATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACGTCTACAGTAAATAATTCGTTATTTATATGTTAGTAATAAGTAATGTTTGCGCTg < 2:385889/287‑1 (MQ=255)
tGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTaa < 2:565848/213‑1 (MQ=255)
gCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTaa > 1:573535/1‑289 (MQ=255)
cGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAAt < 2:1349447/289‑1 (MQ=255)
aTGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTa < 1:1297235/288‑1 (MQ=255)
cTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAggg > 2:38487/1‑289 (MQ=255)
ttACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGt < 1:38487/289‑1 (MQ=255)
aCTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCAcgc > 1:174182/1‑190 (MQ=255)
ccTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAACCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTACACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTAGTTCTTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTATATTGCAGGGTTCGTgcc > 2:1600503/1‑289 (MQ=255)
ttcgttcAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTgccagcc < 2:1443691/289‑1 (MQ=255)
gcTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATaa < 1:1855684/287‑1 (MQ=255)
cTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAg < 1:1645735/289‑1 (MQ=255)
tCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTAcc > 1:1880904/1‑102 (MQ=255)
gcgcGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCGCGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATc > 1:874120/1‑289 (MQ=255)
cACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGt < 2:309569/289‑1 (MQ=255)
aTGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATaacc < 1:1778070/289‑1 (MQ=255)
cgcgAAGTCGATATACTCTTTCCCCTGCGGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGGGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCata < 1:1125304/289‑1 (MQ=255)
cgAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCatat > 2:1333948/1‑288 (MQ=255)
tataCTCTTTCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAg < 2:403794/289‑1 (MQ=255)
tCCCCTGCTGATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCAtata > 2:813410/1‑288 (MQ=255)
tgctgATCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCATATAAAGTGa > 2:1822378/1‑289 (MQ=255)
aTCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATaaa > 1:541593/1‑205 (MQ=255)
aTCCCACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATaaa < 2:541593/205‑1 (MQ=255)
cccACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCata < 2:35398/257‑1 (MQ=255)
cccACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCata > 1:35398/1‑257 (MQ=255)
cccACAAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCATATAAAGTGAATACGtt > 1:15931/1‑289 (MQ=255)
cacaAGCGCGAAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCATATAAAGTGAATACGTTTg < 1:650806/289‑1 (MQ=255)
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CGTAGCGGTCGTGAGCGAATTTACGCGCCAGTTTTAGCGCCGCTTCGTTGGCTTCCGCACCGGAGTTACAAAAGAAGACGCGATCGGCAAACGTGGCGTCGATCAATTTTTTCGCCAGTCGCAGTACCGGCTCGTTGGTGTAACCGT‑TGCCGGTATGCCAGAACTTACTCGCCTGTTCGTTCAGCGCTTCACGCAGTTCCGGATGCGCATGGCCCAGCGCGTTCACCGCAATGCCACCCGCGAAGTCGATATACTCTTTCCCCTGCTGATCCCACAAGCGGCTAC‑CTTCGCCACGTACCGGTATAAAGGGTGCCGGAGCGTAAACAGGTATCATCCATTCATCAAAGTTTTCACGCGTAATTGGCTGAGACATAGCGACCTCTACAGTAAATAATTCGTTATTTATATGTTAATAATAAGTAATGTTTGCGCTGTAAATGTAGATTGCAGGGTTCGTGCCAGCCAGTGATAAAAGTGCATAAACGGCGGAGGCTAACTGGAAATCAAGGAGTTATAACCAAACCATATGCATTTAAAGTGCATATAAAGTGAATACGTTTG > CP042583/1513631‑1514191
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A