Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,532,997 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,532,9970AT99.5% 513.6 / NA 217intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (120/96);  minor base G (1/0);  total (121/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,532,9980GC99.5% 509.9 / NA 217intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (121/95);  minor base A (0/1);  total (121/96)
Fisher's exact test for biased strand distribution p-value = 4.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,532,9990TA100.0% 519.4 / NA 217intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (121/96);  total (121/96)

Only 100 of 217 total aligned reads displayed.

TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAAAGTATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGAGTGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTAGTGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGAGCTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGACAGGGAGTCAAATCCCGC  >  CP042583/1532723‑1533276
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                     
tGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCAGCGGGATGCAGCGTTCCGCGCAGGGTTATAATCCGGGGTCAGGTCATCTCCa                                                                                                                                                                                                                                                                            >  2:1761061/1‑288 (MQ=255)
   cTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACg                                                                                                                                                                                                                                                                         <  1:889942/288‑1 (MQ=255)
           cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGCGCAGGGTTATATACCGGTTGCAGGTCATCTACAACGCCACCTgtc                                                                                                                                                                                                                                                                >  2:1072268/1‑287 (MQ=255)
           cgcCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGgc                                                                                                                                                                                                                                                                >  1:1373612/1‑289 (MQ=255)
                aCATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGAGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGa                                                                                                                                                                                                                                                           <  2:212967/289‑1 (MQ=255)
                               tGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCa                                                                                                                                                                                                                                              >  1:94395/1‑287 (MQ=255)
                                      aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGga                                                                                                                                                                                                                                     >  2:1332488/1‑289 (MQ=255)
                                      aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGga                                                                                                                                                                                                                                     >  1:1792553/1‑289 (MQ=255)
                                      aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGga                                                                                                                                                                                                                                     >  2:1381693/1‑289 (MQ=255)
                                      aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGga                                                                                                                                                                                                                                     >  1:1577421/1‑289 (MQ=255)
                                      aGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGga                                                                                                                                                                                                                                     >  2:1562210/1‑289 (MQ=255)
                                           ccGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTTCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATg                                                                                                                                                                                                                                 >  2:1664773/1‑288 (MQ=255)
                                           ccGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCa                                                                                                                                                                                                                                              >  1:152761/1‑275 (MQ=255)
                                           ccGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCa                                                                                                                                                                                                                                              <  2:152761/275‑1 (MQ=255)
                                                aGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAAc                                                                                                                                                                                                                                                                    >  1:1901289/1‑248 (MQ=255)
                                                           cccaTTATTTGTTACTTCGACGAATCCGCTTCCCGCAGTTTCGCCCCATGTTTCCTTATCCGCATAGTAGCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTGTCGATATCAGTCATATCAATATCATGCAAAAGAAATCAATGTACGTTGCCTACACGGTCGGGACCATCGGGATGCAGCGTTCAGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCa                                                                                                                                                                                                                <  2:1117381/287‑1 (MQ=255)
                                                                     tttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATAcg                                                                                                                                                                                                      <  1:465363/289‑1 (MQ=255)
                                                                     gtgacttggactattCCACTTACCGCTGTTTCGCCCCGTATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATAcg                                                                                                                                                                                                      <  2:872056/275‑1 (MQ=255)
                                                                      ttACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATAcgc                                                                                                                                                                                                     <  2:796745/289‑1 (MQ=255)
                                                                            cgacgaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTg                                                                                                                                                                                                <  1:592896/288‑1 (MQ=255)
                                                                                gaATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGa                                                                                                                                                                                           <  2:835891/289‑1 (MQ=255)
                                                                                      tctTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCtt                                                                                                                                                                                      >  1:999450/1‑287 (MQ=255)
                                                                                                  ttCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGcc                                                                                                                                                                         >  2:1419720/1‑289 (MQ=255)
                                                                                                           tatTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTg                                                                                                                                                                >  1:421064/1‑289 (MQ=255)
                                                                                                                 cgtATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGgcagca                                                                                                                                                          <  1:39033/287‑1 (MQ=255)
                                                                                                                   tATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCata                                                                                                                                                        >  1:1631270/1‑289 (MQ=255)
                                                                                                                      ccGCATAGTATCAGGTCCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACGCGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTg                                                                                                                                                     <  1:1657054/289‑1 (MQ=255)
                                                                                                                                      gcgcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgc                                                                                                                                     >  2:1037871/1‑289 (MQ=255)
                                                                                                                                      gcgcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgc                                                                                                                                     >  1:1353865/1‑289 (MQ=255)
                                                                                                                                      gcgcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgc                                                                                                                                     <  1:1004503/289‑1 (MQ=255)
                                                                                                                                      gcgcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAg                                                                                                                                      <  1:337420/288‑1 (MQ=255)
                                                                                                                                        gcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCCTATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGTTGCAGCGTTCCGAGCAGGGTTATACACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGTCCGGCGATGCCCGATTTCACCATTCCTGAATATACGGCGCTGATGGATTCTTCAGATCTGACCCCGAAAGCCTGGCAGCATATTGCGTAAGATCTTATAgcg                                                                                                                                    >  2:1109723/1‑288 (MQ=255)
                                                                                                                                        gcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCCCCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgcgc                                                                                                                                   >  1:1464148/1‑289 (MQ=255)
                                                                                                                                        gcTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgcgc                                                                                                                                   >  1:1708850/1‑289 (MQ=255)
                                                                                                                                        gcTCCCCCTGACTCACGTCTATACTTTTGCTCTTTCGTTATCATTCATATCAATATCATGCAAAAGAAATAAATTGACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgcg                                                                                                                                    <  2:1043126/288‑1 (MQ=255)
                                                                                                                                         cTCCCCCTGCCTCACGTATATATGTTTGATCTTTAGATATCAATCATATCAATATCATTCAAAAGAAATCAATTTACGTTGCCAACACGGGCGGGACCATCGGGATGCAGCGTTCCGGGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCa                                                                                                                                  <  2:16855/289‑1 (MQ=255)
                                                                                                                                            ccccTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTa                                                                                                                               >  1:1328957/1‑289 (MQ=255)
                                                                                                                                                      aCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGCGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCTCCCGGAGATGCCAGATTTCACCATTAATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATACTGCTGAAGGTATGAAAGCGCACTagtaatactat                                                                                                                     >  2:1465386/1‑279 (MQ=255)
                                                                                                                                                      aCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGNNGCCGGAATTCCNTCGCCCGGAGATGCCAGATTTCACCATTCATGAANATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTat                                                                                                                     >  1:1069167/1‑289 (MQ=255)
                                                                                                                                                      aCGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTat                                                                                                                     >  1:545726/1‑289 (MQ=255)
                                                                                                                                                            ataCTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGa                                                                                                                                                                                           >  2:691603/1‑213 (MQ=255)
                                                                                                                                                            ataCTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGa                                                                                                                                                                                           <  1:691603/213‑1 (MQ=255)
                                                                                                                                                            ataCTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGGTTCTTCATATATGACTCCGGCAGACCGGCAGCACATTCGCGAAGAAATTAAAGCACACTATaaccacactgtatgg                                                                                                               >  2:1809802/1‑280 (MQ=255)
                                                                                                                                                                ttttGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTg                                                                                                           <  1:1562210/289‑1 (MQ=255)
                                                                                                                                                                  ttGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCCGATTTCACCATTCATGCAGATACGCCGCTGATGGATTCTTCAGATATGACGCCGCCAGACTGGCAGCATATTTCTGAAGAGACTAACGCGCACTTAGGCCACTCTGAGGGCTTTg                                                                                                           >  2:1288754/1‑287 (MQ=255)
                                                                                                                                                                  ttGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATgacga                                                                                                                         >  1:187301/1‑273 (MQ=255)
                                                                                                                                                                  ttGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTc                                                                                                         >  1:171541/1‑289 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCAc                                                                                                                                                                                                                      >  1:1823542/1‑172 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCAc                                                                                                                                                                                                                      <  2:1823542/172‑1 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCAtt                                                                                                                                                                                                                  <  1:674569/176‑1 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCAtt                                                                                                                                                                                                                  >  2:674569/1‑176 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATgacga                                                                                                                         >  1:811645/1‑265 (MQ=255)
                                                                                                                                                                          tCGATATCATTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATgacga                                                                                                                         <  2:811645/265‑1 (MQ=255)
                                                                                                                                                                          tCGATATCAGTCATATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACGATGATGGTTTTGTCATTCTGCa                                                                                                 <  1:1109723/289‑1 (MQ=255)
                                                                                                                                                                                tcattcatATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCAc                                                                                           <  2:392470/289‑1 (MQ=255)
                                                                                                                                                                                    tcatATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTgg                                                                                                                                                               >  2:1619024/1‑217 (MQ=255)
                                                                                                                                                                                    tcatATCAATATCATGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTg                                                                                                           >  1:1667040/1‑269 (MQ=255)
                                                                                                                                                                                       tatcaatatcaTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACg                                                                                    <  1:1037871/289‑1 (MQ=255)
                                                                                                                                                                                            atatcaTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCa                                                                                                                                                                                                                <  2:700633/160‑1 (MQ=255)
                                                                                                                                                                                             tatcaTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCg                                                                              >  1:1246891/1‑289 (MQ=255)
                                                                                                                                                                                             tatcaTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCg                                                                              >  2:270999/1‑289 (MQ=255)
                                                                                                                                                                                             tatcaTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCg                                                                              >  1:319479/1‑289 (MQ=255)
                                                                                                                                                                                                caTGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGtat                                                                           >  1:292003/1‑289 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGa                                                                                                                                                                             <  2:1365725/189‑1 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGa                                                                                                                                                                             >  1:1365725/1‑189 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTTCTGAAGATATTAAAGCGCACTATGACGACGATGATGGTTTTGTTATTCTGCACGGCCCCGACACGATGGCGcata                                                                          >  2:1606927/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACg                                                                                    <  2:1219720/278‑1 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGtata                                                                          >  1:1126757/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGtata                                                                          >  1:608365/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGtata                                                                          >  1:1383532/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACAGACACGATGGCGtata                                                                          >  2:511157/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACAAATATGATGGTTTTGTCATTCTTCACGGACCCGACACGATGGTGgata                                                                          >  2:447403/1‑288 (MQ=255)
                                                                                                                                                                                                  tGCAAAAAAACACAATTTACGTTGCCTACACCGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTAAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGAACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATAc                                                                         <  2:599253/289‑1 (MQ=255)
                                                                                                                                                                                                    cAAAAGAAATCAATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGAACGGCACCGCCACGATGGCGTTTAcc                                                                        >  2:1854664/1‑288 (MQ=255)
                                                                                                                                                                                                       aagaaatcaaTTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGcc                                                                     >  1:1562518/10‑288 (MQ=255)
                                                                                                                                                                                                                        tGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTgtcgttcat                                                    <  2:1246891/288‑9 (MQ=255)
                                                                                                                                                                                                                                 gggcgggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGaa                                           >  1:1818819/1‑288 (MQ=255)
                                                                                                                                                                                                                                 gggcgggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAAt                                          <  2:545726/289‑1 (MQ=255)
                                                                                                                                                                                                                                    cgggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGa                                                                                                                                                                                                                                                    <  2:303595/84‑1 (MQ=255)
                                                                                                                                                                                                                                    cgggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAAtctc                                       >  1:1616607/1‑289 (MQ=255)
                                                                                                                                                                                                                                    cgggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCCCGAGAAtctc                                       >  2:572571/1‑289 (MQ=255)
                                                                                                                                                                                                                                      ggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCg                                                                              <  1:621505/248‑1 (MQ=255)
                                                                                                                                                                                                                                      ggACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCg                                                                              >  2:621505/1‑248 (MQ=255)
                                                                                                                                                                                                                                        aCCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTa                                   >  1:27589/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCg                              <  2:71653/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCg                              <  2:1631270/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gATGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGt                            <  2:1577421/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 aTGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTc                           <  2:413116/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  tGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCt                                                                                                                                                   <  2:104933/167‑1 (MQ=255)
                                                                                                                                                                                                                                                  tGCAGCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCt                                                                                                                                                   >  1:104933/1‑167 (MQ=255)
                                                                                                                                                                                                                                                      gCGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCAAGCTCGAGAATCTCGGTAAACCg                              >  2:336890/1‑280 (MQ=255)
                                                                                                                                                                                                                                                       cGTTCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCAc                                                                                                                                 >  1:1824245/1‑180 (MQ=255)
                                                                                                                                                                                                                                                        gTTCCTGGCAGGGTTATATACCGGTGTCAGGTCAACTACAACGCCAACTGGCTCTGATCGCGGAATTCCATAGCCCGGGGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGAGGTTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGAc                   <  2:1709672/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          tCCGAGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCCCCAGAATCCCGGTACACCGGTCATtggtaccg                 >  2:1908692/1‑283 (MQ=255)
                                                                                                                                                                                                                                                              aGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAgc                                                                                                                                     >  1:1663877/1‑169 (MQ=255)
                                                                                                                                                                                                                                                              aGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGACAgggtc             >  1:1840913/1‑287 (MQ=255)
                                                                                                                                                                                                                                                              aGCAGGGTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTCCGCTGTCGTTCATGCTCGAGAATCTCGGTAAACCGGTCCTTGTTACTgggtc             >  2:938528/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                   ggTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCa                                                                                                        >  1:481759/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                   ggTTATATACCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGTCGTTCATGCCTGAGAATCCCGGTAACCCGGTCATTGTGACAgggtcacaaa        >  2:669157/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                        tataCCGGTGTCAGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTTCAGATATGACGCCGGAAGACTGgcagca                                                                                                                                                          <  1:737158/138‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                     
TGCCTGACCTGCGCCAACATGCGTTAAGTCTTGTACTGAGTGGCCGACAGATCGTCGGCCACATTATTTTTTACGTCGACGAATCCTCTTCCCGCTGTTTCGCCCCATATTTCCTTATCCGCATAGTATCAGGTGCGCTCCCCCTGCCTCACGTATATACTTTTGCTCTTTCGATATCATTCATATCAATATCATGCAAAAGAAAAGTATTTACGTTGCCTACACGGGCGGGACCATCGGGATGCAGCGTTCCGAGCAGGGTTATATACCGGTGAGTGGTCATCTACAACGCCAACTGGCGCTGATGCCGGAATTCCATCGCCCGGAGATGCCAGATTTCACCATTCATGAATATACGCCGCTGATGGATTCTAGTGATATGACGCCGGAAGACTGGCAGCATATTGCTGAAGATATTAAAGCGCACTATGACGACTATGATGGTTTTGTCATTCTGCACGGCACCGACACGATGGCGTATACCGCCTCTGCGCTGAGCTTCATGCTCGAGAATCTCGGTAAACCGGTCATTGTGACAGGGAGTCAAATCCCGC  >  CP042583/1532723‑1533276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A