Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,535,814 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,535,8140AT100.0% 561.4 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (110/127);  total (110/127)
*CP0425831,535,8150CG99.6% 564.2 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (109/127);  total (110/127)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,535,8160TA99.6% 564.7 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (109/126);  minor base G (0/1);  total (110/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 237 total aligned reads displayed.

CGCCTATCGCCGCAGACAGCATGGGGCTCCAGTTACCAACAAAACTGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAAACTGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGACTGCCGATGAAATAACCAAACATTAATG‑CGCTGGTAAAGGCGGCATTGAGGAAATTATTACTCCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAATTCACTTGCCGCATCT  >  CP042583/1535537‑1536093
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
cGCCTATCGCCGCAGACAGCATGGTCGACCAGTTAACAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGACACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGaa                                                                                                                                                                                                                                                                               <  2:1050589/289‑1 (MQ=255)
 gCCTATCGCCGCAGACAGCATGGGCGACCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGaaa                                                                                                                                                                                                                                                                              >  1:172076/1‑289 (MQ=255)
      tCGCCGCAGACAGCATGGGCGACCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAAcc                                                                                                                                                                                                                                                                         <  1:45727/289‑1 (MQ=255)
       cgccgcAGACAGCATGGGCGACCAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCa                                                                                                                                                                                                                                                                        >  1:695441/1‑289 (MQ=255)
       cgccgcAGACAGCACGGGCACCCAGTGACCAACAAATGAGGGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCa                                                                                                                                                                                                                                                                        <  2:135738/289‑1 (MQ=255)
                    atgggcgaccAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATg‑cc                                                                                                                                                                                                                                                           <  1:291701/280‑2 (MQ=255)
                        gcgaccAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATg‑ccgaggt                                                                                                                                                                                                                                                      >  1:31752/5‑283 (MQ=255)
                         cgaccAGTTACCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATg‑ccgaggta                                                                                                                                                                                                                                                     >  2:1235834/4‑282 (MQ=255)
                                  aCCAACAAATGAGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCa                                                                                                                                                                                                                                            <  1:877223/289‑1 (MQ=255)
                                          atgagAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGaa                                                                                                                                                                                                                                    >  2:1668587/5‑289 (MQ=255)
                                          atgagAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGaa                                                                                                                                                                                                                                    >  2:366437/5‑289 (MQ=255)
                                              gAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGACCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAACCGAGGAAATAACCAAACATTAATG‑CCGAGGTAAAGTCGGCAttagtgcaatta                                                                                                                                                                                                                                >  1:1161911/1‑279 (MQ=255)
                                                 ccGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAattattt                                                                                                                                                                                                                             >  2:138320/1‑288 (MQ=255)
                                                 ccGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGCAGTTACCAATAAACCCACCAGTAAGTGCGCCGAGGAAATAAACAAACATTAATG‑CCGAGGTAAAGTCGGCATTGAGGAAattattt                                                                                                                                                                                                                             >  2:525611/1‑288 (MQ=255)
                                                   gcgcgGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAattatttga                                                                                                                                                                                                                           <  1:13364/289‑4 (MQ=255)
                                                    cgcgGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAattatttga                                                                                                                                                                                                                           >  1:383575/1‑285 (MQ=255)
                                                    cgcgGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCATGCGCCGCCCAAAGTAGTCACCAATAAACCACCCAGTAAGTGAGCCGATGCAATAACAAAACATAAATC‑CCGAGGTAAAGGCGGACATGGGGAAattaattga                                                                                                                                                                                                                           >  2:1305359/1‑283 (MQ=255)
                                                         aCCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAattatttgaccatc                                                                                                                                                                                                                      <  2:1035633/288‑9 (MQ=255)
                                                          ccATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGaccatcca                                                                                                                                                                                                                    <  1:840291/289‑1 (MQ=255)
                                                          ccATGTGCCACGCAACGTAGGGGGGGTAAACCCCGTAAATGAGGCATAGCCAACCATAATCAGCGACCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGaccatcca                                                                                                                                                                                                                    <  2:1844662/289‑1 (MQ=255)
                                                             ttttCCACCCACCGTCGCGGGACTAAACTCCGTAAATGAGGCATAACCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTTCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTg                                                                                                                                                                                                                 <  1:433387/289‑1 (MQ=255)
                                                                  cACGCACCCTCGCGGGGCTAAACTCCGTAAATGAAGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCGGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTAc                                                                                                                                                                                                            <  1:872051/289‑1 (MQ=255)
                                                                   aCGCACCGTCGCGGGGATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGaa                                                                                                                                                                                                                                    >  2:959409/1‑264 (MQ=255)
                                                                               ggggATAAACTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTaa                                                                                                                                                                                                <  1:1018392/288‑1 (MQ=255)
                                                                                       aCTCCGTAAATGAGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACAAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATAGAGGAAATTATTTGACCATCCATTGCTTACCAGATTTGCTAAAACGCCAta                                                                                                                                                                                       >  1:710976/1‑288 (MQ=255)
                                                                                           cgtaaatgaggCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCg                                                                                                                                                                                   >  2:1363088/10‑289 (MQ=255)
                                                                                                     gCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCa                                                                                                                                                                         >  1:194683/1‑289 (MQ=255)
                                                                                                            ccaCCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAAcc                                                                                                                                                                   <  2:384102/286‑1 (MQ=255)
                                                                                                            cAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAAcc                                                                                                                                                                   <  1:1668587/288‑1 (MQ=255)
                                                                                                            cAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAAcc                                                                                                                                                                   <  1:404509/288‑1 (MQ=255)
                                                                                                             aaCCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCt                                                                                                                                                                 <  1:161792/289‑1 (MQ=255)
                                                                                                              aCCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCGGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTAACAGCTTTGCTAAGACGACATTACCGGCGTAACTCAAAAACCATg                                                                                                                                                                >  1:1457380/1‑289 (MQ=255)
                                                                                                                    aTCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTtaata                                                                                                                                                          >  1:1221598/1‑289 (MQ=255)
                                                                                                                    aTCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCAGCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCCGTtaata                                                                                                                                                          >  1:98127/1‑289 (MQ=255)
                                                                                                                     tCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCCAAAACCCTGTtaataa                                                                                                                                                         >  1:158250/1‑289 (MQ=255)
                                                                                                                     tCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTtaataa                                                                                                                                                         <  2:210448/289‑1 (MQ=255)
                                                                                                                     tCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAAGACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTtaataa                                                                                                                                                         <  1:1114780/289‑1 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGAccatccat                                                                                                                                                                                                                   <  2:1540649/227‑1 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTAc                                                                                                                                                                                                            <  1:751148/234‑1 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTAc                                                                                                                                                                                                            >  2:751148/1‑234 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAg                                                                                                                                                      >  1:1790030/1‑288 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGa                                                                                                                                                     >  2:677135/1‑289 (MQ=255)
                                                                                                                         cgcCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGCAGTAACCCAAACACCCTGTTAATAACAg                                                                                                                                                      >  1:1840763/1‑288 (MQ=255)
                                                                                                                            ccccATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTa                                                                                                                                                  <  1:549998/289‑1 (MQ=255)
                                                                                                                            ccccATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTa                                                                                                                                                  <  1:968064/289‑1 (MQ=255)
                                                                                                                                        tCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGa                                                                                                                                                                                                                                     >  1:589682/1‑194 (MQ=255)
                                                                                                                                         cccATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAgac                                                                                                                                                                                             >  2:472929/1‑233 (MQ=255)
                                                                                                                                         cccATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAgac                                                                                                                                                                                             <  1:472929/233‑1 (MQ=255)
                                                                                                                                          ccATCCAGAAGAGAAAAAAGAT‑AGCGCAGGACATATCACGGACAAAATCTGCCCCTGTTGCAGCAATACCAACGATGACAAGATTTATCCGAAACGCCCTGGGCCGCCCAAAGGGGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCACACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTAATTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATAcc                                                                                                                                    <  2:889523/289‑1 (MQ=255)
                                                                                                                                            aTCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCCGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCaa                                                                                                                                  >  1:1243527/1‑289 (MQ=255)
                                                                                                                                            aTCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTta                                                                                                                                           >  1:212735/1‑280 (MQ=255)
                                                                                                                                            aTCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCaa                                                                                                                                  >  1:1762554/1‑289 (MQ=255)
                                                                                                                                            aTCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCaa                                                                                                                                  >  2:179386/1‑289 (MQ=255)
                                                                                                                                                   aGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACg                                                                                                                           <  1:179386/289‑1 (MQ=255)
                                                                                                                                                      gAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGACACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATa                                                                                                                        >  2:433297/1‑289 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAgac                                                                                                                                                                                             >  1:619348/1‑198 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAgac                                                                                                                                                                                             <  2:619348/198‑1 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGt                                                                                                                                                               >  1:1179081/1‑228 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAAtata                                                                                                                             <  2:1274233/262‑1 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAAtata                                                                                                                             >  1:1274233/1‑262 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAAc                                                                                                                 >  1:365070/1‑274 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCaa                                                                                                   >  1:150018/1‑288 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAg                                                                                                  <  2:643168/289‑1 (MQ=255)
                                                                                                                                                                             atCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAg                                                                                                  <  1:1383030/289‑1 (MQ=255)
                                                                                                                                                                               cAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAg                                                                                                  <  1:1646717/287‑1 (MQ=255)
                                                                                                                                                                                  ggACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCt                                                                                                                                                                                                  <  2:818888/188‑1 (MQ=255)
                                                                                                                                                                                  ggACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCt                                                                                                                                                                                                  >  1:818888/1‑188 (MQ=255)
                                                                                                                                                                                  ggACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGt                                                                                              >  1:644003/1‑288 (MQ=255)
                                                                                                                                                                                  ggACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGt                                                                                              >  2:1096391/1‑288 (MQ=255)
                                                                                                                                                                                  ggACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACAAAATATACGATAATGAACACTGGCCAAAGGCAAGCGGt                                                                                              >  2:1905858/1‑288 (MQ=255)
                                                                                                                                                                                      aaaaGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATAAGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAg                                                                                          >  2:144856/1‑288 (MQ=255)
                                                                                                                                                                                        aaGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCt                                                                                       >  2:1221963/1‑289 (MQ=255)
                                                                                                                                                                                            ggacccGGTTGCAGCAATACCGACGATGAGAAGATTTATGGGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGGAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTAGTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTgcg                                                                                   <  2:31302/286‑1 (MQ=255)
                                                                                                                                                                                             gCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTgcg                                                                                   >  1:525830/1‑288 (MQ=255)
                                                                                                                                                                                                ccTGTTGCAGGAATACAGAAGATGAGAAGGTTTATGCGACACGCCCTGCGACGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGACGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCaa                                                                               <  2:570075/289‑1 (MQ=255)
                                                                                                                                                                                                  tGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCaaaa                                                                                                                                                                      <  1:245656/200‑1 (MQ=255)
                                                                                                                                                                                                     tGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGa                                                                          <  1:1052407/289‑1 (MQ=255)
                                                                                                                                                                                                        acgaaTACCGCAGATTATAAGAGTTAGGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCTCCGGGAAGTGAGCCGATGAAATAACCAAACATTAATGTCGC‑GGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACGTTATCGGAGTAACTCCAAAACCCGGTTAATAACAAACTAAAGCTTATAATACCAAATATACAATAATGAAACTGGGCCAAAGGCAAGCGGTCCAGTCTTTCGCCACTTTGATCa                                                                       <  2:172076/286‑1 (MQ=255)
                                                                                                                                                                                                           aaTACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCata                                                                     <  2:1157417/288‑1 (MQ=255)
                                                                                                                                                                                                            ataccgcagaatagaagaTTTAGGCGCCACGCCCTTCGCCGCCCAAACTAGTAACCAATGAACCCACCCGTAAGTGAGCCGGTGAAATAACACAACATTAATG‑CCTAGGTAAAGGCGGCATTGAGGCAATTATTTGACCATCTATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTAAAAACCCCTGTTAATATCATACTAAAGCTTATAATACCCAATATACGATAATGAAACCGGCCCAAAGGCAAGCGCTCCAGTCTTGCGCCAATTTGATCATAtt                                                                   <  2:572018/277‑1 (MQ=255)
                                                                                                                                                                                                            aTACCGACGATGAGAAGATTTATGTGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATAtt                                                                   >  1:466794/1‑289 (MQ=255)
                                                                                                                                                                                                            aTACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATAcc                                                                                                                                    <  2:421935/224‑1 (MQ=255)
                                                                                                                                                                                                            aTACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATAcc                                                                                                                                    >  1:421935/1‑224 (MQ=255)
                                                                                                                                                                                                            aTACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATAtt                                                                   <  1:977509/289‑1 (MQ=255)
                                                                                                                                                                                                            aTAACGACGATGAGAAGATTTATGCGAAACGCCCTGCACTGTCCAAAGTAGTCACCAATAAACCCACCAGCAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCGTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCGTGTTAATAACAGACTAAAGCTTATAATCCTAAATATACGATAATGAACCCGGGCCAACGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATAtt                                                                   <  2:1331088/289‑1 (MQ=255)
                                                                                                                                                                                                             tACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTg                                                                  <  2:150018/289‑1 (MQ=255)
                                                                                                                                                                                                             tACCGACGATGAGAAGATTGCTGCGAAACGCACTGCGCCGCCCAAGGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAACAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTg                                                                  <  2:239932/289‑1 (MQ=255)
                                                                                                                                                                                                                       gagaAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGa                                                                          <  1:1416880/271‑1 (MQ=255)
                                                                                                                                                                                                                                tATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTataat                                                                                                                                       <  1:1361595/201‑1 (MQ=255)
                                                                                                                                                                                                                                           cccTGCGCCGCCCAAAGTGATCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTaaaaa                                    <  2:732675/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    gccCAAAGTAGTCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAAt                           >  1:909104/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               tCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAAcc                                                                                                                                                                   <  1:1744117/142‑1 (MQ=255)
                                                                                                                                                                                                                                                               tCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAAcc                                                                                                                                                                   >  2:1744117/1‑142 (MQ=255)
                                                                                                                                                                                                                                                               tCACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAAt                 >  2:269989/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                cACCAATAAACCCACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAATTc               >  1:610310/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aaCCCACCAGTAAGTGGGCCGATGAAAGAAGCAAACATTAATA‑CCGAGGTAAATGCGGCATTGAGGAAATTATTTGACCAACCCTTGCTTACCATCTTTGCTAAGACGACAGTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTGAAGCTTATAATACCAAAGATACGCGAAGGGCACCGGGCCAAAGGCAAGCGGTCCAGTCTTGGGCCAATTTGATCAGATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAATGTCACTGGcgg       <  2:1823410/289‑3 (MQ=255)
                                                                                                                                                                                                                                                                          cccACCAGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAATTCACTTGCCGCa     <  2:485666/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             accaGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTa                                                                                                                                                                              >  2:1183192/1‑117 (MQ=255)
                                                                                                                                                                                                                                                                             accaGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAg                                                                                                  >  2:465261/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                             accaGTAAGTGAGCCGATGAAATAACCAAACATTAATG‑CCGAGGTAAAGGCGGCATTGAGGAAATTATTTGACCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAATTCACTTGCCGCATCt  >  1:1086699/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
CGCCTATCGCCGCAGACAGCATGGGGCTCCAGTTACCAACAAAACTGAGCCGCGCGGACCATTTTCCACGCACCGTCGCGGGGATAAACTCCGTAAAACTGGCATAGCCAACCATAATCAGCGCCCCCATTCCTGTTCCCATCAGGAAGCGAAAGAAGATGAGC‑CAGTACATATCAGGGACAAAAGCGGCCCCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAGTCACCAATAAACCCACCAGTAAGACTGCCGATGAAATAACCAAACATTAATG‑CGCTGGTAAAGGCGGCATTGAGGAAATTATTACTCCATCCATTGCTTACCAGCTTTGCTAAGACGACATTACCGGAGTAACTCAAAAACCCTGTTAATAACAGACTAAAGCTTATAATACCAAATATACGATAATGAAACCGGGCCAAAGGCAAGCGGTCCAGTCTTGCGCCAATTTGATCATATTGTTCCATTAGGTGCCTCGGATTTGCTAAAAAGGTAGCAATTGCGGCAAATTCACTTGCCGCATCT  >  CP042583/1535537‑1536093

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A