Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,539,277 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,539,2770AT99.6% 583.4 / NA 248intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (110/137);  minor base G (1/0);  total (111/137)
Fisher's exact test for biased strand distribution p-value = 4.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,539,2780CG99.2% 581.2 / NA 248intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (110/136);  minor base A (1/1);  total (111/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,539,2790TA99.6% 587.5 / NA 248intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (111/135);  total (111/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 248 total aligned reads displayed.

CTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAAGCTAATTGCAGTTTTAATGTCGGCATCACTGATCCCGCTTGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCACTCGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAAACTATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAAACTATTCATACCATGAGTCCAGGCGTT  >  CP042583/1538997‑1539555
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
cTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGtata                                                                                                                                                                                                                                                                                >  1:423255/1‑289 (MQ=255)
       aTCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCa                                                                                                                                                                                                                                                                         <  1:35418/289‑1 (MQ=255)
        tCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCAt                                                                                                                                                                                                                                                                        <  1:1547115/289‑1 (MQ=255)
         cAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATg                                                                                                                                                                                                                                                                       <  1:1037342/289‑1 (MQ=255)
                      tttAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATg                                                                                                                                                                                                                                                          >  1:1469137/1‑289 (MQ=255)
                       ttAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGa                                                                                                                                                                                                                                                            <  1:1358206/286‑1 (MQ=255)
                                tCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCTGAACAGAAACGGCATCGCGTACGCGTTTGTCGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCa                                                                                                                                                                                                                                                <  2:368503/289‑1 (MQ=255)
                                tCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGCTGGCGACAGCCa                                                                                                                                                                                                                                                >  1:825156/1‑289 (MQ=255)
                                tCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCa                                                                                                                                                                                                                                                <  1:903043/289‑1 (MQ=255)
                                tCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCa                                                                                                                                                                                                                                                <  2:1408918/289‑1 (MQ=255)
                                  cAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCaat                                                                                                                                                                                                                                              <  1:34362/289‑2 (MQ=255)
                                     tGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCaatgaa                                                                                                                                                                                                                                           >  2:754231/1‑285 (MQ=255)
                                         cGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCaatgaatcac                                                                                                                                                                                                                                       <  2:1533927/289‑9 (MQ=255)
                                          gTTCTTTTACAGCTTTACGTACTTACCGTTCCAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATcaca                                                                                                                                                                                                                                      <  2:1594245/289‑1 (MQ=255)
                                              ttttACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGccc                                                                                                                                                                                                                                  <  1:1209159/289‑1 (MQ=255)
                                                ttACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGt                                                                                                                                                                                                                                >  1:264718/1‑289 (MQ=255)
                                                      cTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCAATGCTGGTTGCCGATGGCGACAGCCAATGAATCAAAGCCCGTaaggtc                                                                                                                                                                                                                          >  2:811772/1‑284 (MQ=255)
                                                        ttACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCAt                                                                                                                                                                                                                                                                        >  2:804604/1‑241 (MQ=255)
                                                          aCGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTcaaca                                                                                                                                                                                                                      >  1:1337967/1‑289 (MQ=255)
                                                          aCGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTcaaca                                                                                                                                                                                                                      >  2:1805217/1‑289 (MQ=255)
                                                              aCTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAAtt                                                                                                                                                                                                                  >  1:1289330/1‑289 (MQ=255)
                                                               cTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGCTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCCTCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCCCTGACGGATAAACCCCATTCTGGTTGCCGATGGCGCACGCCAATGAATCAACGCCCCTACGTTCAACAAATTc                                                                                                                                                                                                                 >  2:330810/1‑289 (MQ=255)
                                                                ttCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCa                                                                                                                                                                                                                >  2:268532/1‑289 (MQ=255)
                                                                ttCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCa                                                                                                                                                                                                                <  1:1588584/289‑1 (MQ=255)
                                                                ttCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCa                                                                                                                                                                                                                <  1:566013/289‑1 (MQ=255)
                                                                ttCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGGTCCACACATTCa                                                                                                                                                                                                                >  2:1105019/1‑289 (MQ=255)
                                                                 tCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCa                                                                                                                                                                                                                >  1:551543/1‑288 (MQ=255)
                                                                 tCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAg                                                                                                                                                                                                               <  1:969711/289‑1 (MQ=255)
                                                                     gTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCTCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACTGCATAGCGTACGCGTCTGACGACCTCAACGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGCTGGCGACAGCCAATGAATCACAGCCCGTACGTTAAACAAAATCAgccg                                                                                                                                                                                                            >  2:1235646/1‑288 (MQ=255)
                                                                     gTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAgccgc                                                                                                                                                                                                           <  1:762419/289‑1 (MQ=255)
                                                                     gTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAgccgc                                                                                                                                                                                                           <  2:479256/289‑1 (MQ=255)
                                                                     agtCTAAATGCATGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCCTTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAgccgc                                                                                                                                                                                                           <  2:660678/287‑1 (MQ=255)
                                                                          aaaTGCAGGAAAGGCTGATCCTGGGTTTCTTTAACTGCAACCATTGCGGCCTGACAGAGCTCAGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGt                                                                                                                                                                                                      <  1:1661086/289‑1 (MQ=255)
                                                                           aaTGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGATGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTc                                                                                                                                                                                                     <  1:1076389/289‑1 (MQ=255)
                                                                             ttcAGGAAAGGGTGATCCTGGGTTCCTTTCACTGCACCCATTTCGGCTTGACCGAACTCCGTATGAAGGTTGATTTTCGCGTTACCCAACGAAGTTGCAGTTTTAATGTCGGCATCACTTATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGTCGTATAAACCCCATGCTGGTTGCCGATGGCGACAGGCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAg                                                                                                                                                                                                   <  2:1219947/287‑1 (MQ=255)
                                                                             tGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAg                                                                                                                                                                                                   <  1:172953/289‑1 (MQ=255)
                                                                                aGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGATAGCCAATGAATCACAGACCGTACGTTCCACAAATTCAGCCGCCTGGTCAGGa                                                                                                                                                                                                 >  1:1869793/1‑288 (MQ=255)
                                                                                 ggAAGGGCTGCTCCTGTTTTTCTGTCACTGCAACCATGGCGGCCGGACAGAGCTTCGTATGAATGTGGATTTTCGCGATACGCAACCAAATTGCAGTGTTAATATCGGCATCAGTGCTGCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGCCGACCTCAATGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCAGATGGCGACAGCCAATTAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  2:1507844/288‑1 (MQ=255)
                                                                                 ggAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCCCAAAGTTCAATTGTGACACGGACGAATAACCCCCATGCTGGTGGCCGATGGCGACAGCCAATGAAACACAGCCCATACGTTCGAAAAAATATGCCCCCCGGTCAGGATc                                                                                                                                                                                               >  2:41904/1‑289 (MQ=255)
                                                                                  gAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  2:1355706/287‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:396371/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  2:771275/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:474190/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:1218294/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:1805217/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:1263326/286‑1 (MQ=255)
                                                                                   aaaGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTAGGAATGTTGATTTTCGCGATACCCAACGATATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  1:1304266/286‑1 (MQ=255)
                                                                                     aGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGta                                                                                                                                                                                           <  1:1105019/289‑1 (MQ=255)
                                                                                                     tctttcACTGCGACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGcc                                                                                                                                                                            >  2:98154/1‑288 (MQ=255)
                                                                                                                 aCCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCAt                                                                                                                                                               >  1:706796/1‑289 (MQ=255)
                                                                                                                       gCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACgg                                                                                                                                                         >  1:166342/1‑289 (MQ=255)
                                                                                                                         ggCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGt                                                                                                                                                        <  1:685815/288‑1 (MQ=255)
                                                                                                                                      tCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                                                           <  1:1413929/288‑1 (MQ=255)
                                                                                                                                      tCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                                                           <  1:710785/288‑1 (MQ=255)
                                                                                                                                      tCCGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGAGCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                                                           <  1:724663/288‑1 (MQ=255)
                                                                                                                                        cGTATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATg                                                                                                                                         >  2:1855926/1‑288 (MQ=255)
                                                                                                                                          tATGAATGTTGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGc                                                                                                                                        >  1:1049943/1‑287 (MQ=255)
                                                                                                                                                  ttaaTTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTcc                                                                                                                               >  1:936624/4‑288 (MQ=255)
                                                                                                                                                  ttGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACTTTCAACAAATTCATCCGCCTGGTCAGGATAGGTATAGTGATAGCCCGCCAGCGCGTCCTCATAAACGGTTTCATTTCCGACATGCCCTAATTcc                                                                                                                               >  2:686613/1‑288 (MQ=255)
                                                                                                                                                  ttGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTcc                                                                                                                               >  2:1142827/1‑288 (MQ=255)
                                                                                                                                                   tGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGc                                                                                                                             <  2:1049943/289‑1 (MQ=255)
                                                                                                                                                   tGATTTTCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGc                                                                                                                             <  1:1433368/289‑1 (MQ=255)
                                                                                                                                                      ttttCGCGATACCCAACGAAATTGCATTTTTAACGTCGGCATCACTGATCCCCGATGCACCGTGCAACACCAGCGGAACAGAAACTGCATCGCGTACGCGTTTGACCACCACAAAGTTCAATTGTGGCTCTGACTTATAAACCCCATGCTGGTTGCCGCTGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCctc                                                                                                                          <  1:1402538/289‑1 (MQ=255)
                                                                                                                                                        ttCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTa                                                                                                                        <  2:561849/289‑1 (MQ=255)
                                                                                                                                                        ttCGCGATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTa                                                                                                                        <  1:795264/289‑1 (MQ=255)
                                                                                                                                                          cgcgATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTAc                                                                                                                       >  2:162381/1‑288 (MQ=255)
                                                                                                                                                          cgcgATACCCAACGAAATTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGGCAGGATCGGTATAGTTATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGTCATGCCCTCATTCCGCCACTAc                                                                                                                       >  2:603846/1‑288 (MQ=255)
                                                                                                                                                                    aacgaaaTTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCa                                                                                                            <  1:814543/284‑1 (MQ=255)
                                                                                                                                                                    aacgaaaTTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCa                                                                                                            >  1:1246672/6‑289 (MQ=255)
                                                                                                                                                                     acgaaaTTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACCTGCCATAATTCCGCCACTCCCCGAATACCCaa                                                                                                           >  2:922136/5‑288 (MQ=255)
                                                                                                                                                                         aaTTGCAGTTTTAATGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGa                                                                                                       >  1:843364/1‑289 (MQ=255)
                                                                                                                                                                                       tGTCGGCATCCCTGATCCCCAATGCACCGTGCAAAACCAGCGGAACGGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGAc                                                                                         <  2:895896/289‑1 (MQ=255)
                                                                                                                                                                                       tGTCGGCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGAc                                                                                         <  1:98154/289‑1 (MQ=255)
                                                                                                                                                                                         tCGGCACCACAGATCCCCTATGCACCGGGCAAAACCAGCGGAACCGAAACGGCATAGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCAAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACa                                                                                        <  2:1680966/288‑1 (MQ=255)
                                                                                                                                                                                           ggCATCACTGATCCCCGATGCACCGTGCAAAACCAGCGGAACAGAATCGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                                                           <  1:1509308/235‑1 (MQ=255)
                                                                                                                                                                                                      tccccgatGCAACGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTa                                                                           <  1:1018155/281‑1 (MQ=255)
                                                                                                                                                                                                          cgatGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTca                                                                                                                                                                                                                         >  1:229846/4‑142 (MQ=255)
                                                                                                                                                                                                               cACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATAtt                                                                 >  1:640476/1‑289 (MQ=255)
                                                                                                                                                                                                                 ccGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCCTACACGGGTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTATTTGACTAAACGAAAAtttt                                                               >  2:1031505/1‑289 (MQ=255)
                                                                                                                                                                                                                   gTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACa                                                                                                                                           <  2:209291/211‑1 (MQ=255)
                                                                                                                                                                                                                    tGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCaatgaat                                                                                                                                                                                                                                          <  2:968850/115‑6 (MQ=255)
                                                                                                                                                                                                                    tGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCTCCTCTACCGCAATACCCAGCGGCTGGAAGAAATCGACAGCCTCTTTGGTTCAAACAATAtttttgt                                                            >  2:1708120/1‑286 (MQ=255)
                                                                                                                                                                                                                    tGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTttctt                                                            >  2:469095/1‑289 (MQ=255)
                                                                                                                                                                                                                              gCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACgg                                                                                                                                                         >  1:657285/1‑186 (MQ=255)
                                                                                                                                                                                                                                    aagcaaCGGCTGCGCGTACGCGTTTGTCGACCGCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGATTGCCGATGGCGACAGCCAATGACTCACAGCCCGTACGTACAACAAATTCAGCCGCCGGGTCAGGATCGGTAGAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCAGTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGa                                            <  2:1448199/285‑1 (MQ=255)
                                                                                                                                                                                                                                          cGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATc                                      <  1:803111/289‑1 (MQ=255)
                                                                                                                                                                                                                                           gccATCGCGTCCGCGTTTGCCGACCTCAAGGTTAAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATc                                      <  2:551543/286‑1 (MQ=255)
                                                                                                                                                                                                                                                     aCGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTaat                            <  2:256128/288‑2 (MQ=255)
                                                                                                                                                                                                                                                       gcgTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                <  2:1515028/122‑1 (MQ=255)
                                                                                                                                                                                                                                                       gcgTTTGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGAt                                                                                                                                                                                                >  1:1515028/1‑122 (MQ=255)
                                                                                                                                                                                                                                                           ttGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTaatgaattca                     <  1:314247/289‑9 (MQ=255)
                                                                                                                                                                                                                                                           ttGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTaatgaattca                     >  2:1494798/1‑281 (MQ=255)
                                                                                                                                                                                                                                                            tGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAt                    >  2:1308561/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            tGACGACCTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCAt                    >  1:1696239/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  ccTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt               <  2:640476/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt               <  1:469095/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCAt               <  1:603846/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cTCAAAGTTCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGACGCACCACGCATTAATAAATTCAAACAATGa             >  2:32762/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           tCAATTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAg       <  1:291492/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aaTTGTGGCTCTGACGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAATGAATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAATGAATTCATACCATGAGTCCAGGCGt   >  1:257146/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
CTTTGCCATCAGAACCGAACAGTTTAATTTTTTCCAATGCCCGTTCTTTTACAGCTTTACGTACTTCACGTTCTAAATGCAGGAAAGGCTGATCCTGGTTTTCTTTCACTGCAACCATTGCGGCCTGACAGAGCTCCGTATGAATGTTGATTTTCGCGATACCCAAGCTAATTGCAGTTTTAATGTCGGCATCACTGATCCCGCTTGCACCGTGCAAAACCAGCGGAACAGAAACGGCATCGCGTACGCGTTTGACGACCTCAAAGTTCAATTGTGGCTCACTCGTATAAACCCCATGCTGGTTGCCGATGGCGACAGCCAAACTATCACAGCCCGTACGTTCAACAAATTCAGCCGCCTGGTCAGGATCGGTATAGTGATAGCCCGCCAGCGCTTCCTCATAAACGGTTTCATTACCGACATGCCCTAATTCCGCCTCTACCGGAATACCCAGCGGATGGAAGAAATCGACAGCCTCTTTGGTTAAACGAATATTTTCTTCGAAATCAAACGCGGAAGCATCACGCATTAAACTATTCATACCATGAGTCCAGGCGTT  >  CP042583/1538997‑1539555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A