Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,542,214 |
6 bp→TGATGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,542,214 | 0 | A | T | 98.9%
| 627.4
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (121/144); minor base G (0/3); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 2.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,542,215 | 0 | C | G | 99.2%
| 625.7
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base G (118/147); minor base A (2/0); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 2.01e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,542,216 | 0 | T | A | 98.9%
| 627.0
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/2); major base A (118/146); minor base C (3/0); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 9.18e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,542,217 | 0 | A | T | 99.2%
| 625.1
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base T (119/145); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 2.06e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,542,218 | 0 | C | G | 99.6%
| 630.7
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (119/148); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 4.48e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,542,219 | 0 | T | A | 99.6%
| 638.7
/ NA
| 269 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (120/148); minor base C (1/0); total (121/148) |
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 269 total aligned reads displayed.
TAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCACTGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TACTACTATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGGCTCAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCAACTGGTGGAGTCATAGGCCATA > CP042583/1541943‑1542489
||||||
tAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCa < 1:1140470/289‑1 (MQ=255)
aaGGAAATCCATCATCGGTGAGAAAGAGCCGTCAACCATCGAGGCAATATGAATGACCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCAACCAGCGCACCGAGAAACATGCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCaa < 2:320731/289‑1 (MQ=255)
aTCCATATTCGGTGAGAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGt > 1:474310/1‑289 (MQ=255)
tcaatatTCGGTGAGCAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGATTTGTCGCCAATGATGCCGCCCACCAGCGCAACGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTCGCTGTGGTGGAATGATCTGTCCAGCCCAACCCTTTCAGCTGCGCGAGGATCAAGCCACCCACGGCATTCACACAGCCGAC‑AAGCAAGCCAAACGCGCCCAAGGCAAACA‑TTAAACAATGCCATCGGCACTACggga > 2:510434/4‑287 (MQ=255)
ggtgagAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCa > 1:499917/6‑289 (MQ=255)
tgagAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg < 1:1045956/285‑1 (MQ=255)
tgagAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg < 1:264715/285‑1 (MQ=255)
tgagAAAGCACCGACAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCACCGGCAATCCGGTAAGCGATCCAg > 2:1548851/4‑288 (MQ=255)
ggagAAAGAACCGACACCCAGCGGGGAAATATGAATGGCCTCATAGAGGATGAACGCAGTTCGGCGACCGGTTCTGTCGGCAATGATGCCGCCCACCGGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg < 2:1185835/285‑1 (MQ=255)
aCCGACAACCATCGCGGCAATATGAATGGCCTCATAGCGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGc‑acca < 1:78105/289‑1 (MQ=255)
aCAACCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGACGTGA‑TTGCTGCGAATGTGGCTGTGGTGGAGGTATCTGGGCAGCCCAACGCTTTCAGCTGCGCGATGCCCAAGCCCCCACCGGCATTACTCCAGCACAC‑AAGCAAGCCAAACACGACCATTGCAGACA‑TTGATGAATGCCAGCGGCAAATCAGTAAGGCATCCCGCC‑TGCAACCACaac > 2:1430597/1‑288 (MQ=255)
aacatcgaggCAATAGGAATGGCCGCATAGAGGAGGAACGCATTGCGGCGACCGGTTTTGTCGCCATTGATGCCGCCCACAAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGGGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCg < 2:1835656/281‑1 (MQ=255)
cgatagaggCAATAAGGATGGCAGCAGAGGGGGTGAACGGACTTCTGATACCGGTTTTGCTGCCAATGATGCCCCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCgg < 2:1018955/282‑1 (MQ=255)
ccctcgaggCACTATGAATGGCCTCAGAGAGGGTGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATcc < 2:753195/262‑1 (MQ=255)
ccatcgaggCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGGGGTGGAAATATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCACCGGCATTAATCCAGCAGGC‑AAGCAAGCCAAACGGGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAATCGATCCAGCCGGGC‑ACCACAATGAgg > 2:2999/8‑289 (MQ=255)
gCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTa > 2:616136/1‑289 (MQ=255)
aaTATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTTTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCAAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTAt < 1:344448/288‑1 (MQ=255)
aaTATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGCCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGACCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGCCATTACTCCAGCAGAC‑AAGCCAGCCAAACGCGACGATGCCAAACA‑TTGATGACTGCAAGCGACAATCCTGAAAGCGATCCACCCGTCA‑ACCCCAACTCGGTATTGTTaca > 2:1720690/1‑287 (MQ=255)
atatGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTa > 1:116271/1‑286 (MQ=255)
aTGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCa > 1:916541/1‑289 (MQ=255)
gCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGc > 1:1484646/1‑289 (MQ=255)
tCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCAACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGAt < 1:1250604/289‑1 (MQ=255)
cATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATa > 1:1667085/1‑289 (MQ=255)
tAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATTATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAAc < 2:439692/289‑1 (MQ=255)
tAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAAc > 1:742742/1‑289 (MQ=255)
tAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAAc < 1:120877/289‑1 (MQ=255)
cggtttaccGCATTCCGACGACGGTTTTGGTCGCTAATGATGCCGCCAACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGt < 2:555507/280‑1 (MQ=255)
cggttgaaccagtttCTGGAAACGGTTTTGGCTCCAATGATCACGCCCACCAGAGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGt < 2:1230087/276‑1 (MQ=255)
ggATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGt < 1:835651/287‑1 (MQ=255)
gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCCGCCGCAATCCGGTAATCGATCCAGCCGTGC‑ACCACAATCCGGTTTTTGTATCTTTTCCTTTCGATAACGtt > 2:1668484/1‑287 (MQ=255)
gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAg > 1:1823754/1‑232 (MQ=255)
gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATg < 1:273680/255‑1 (MQ=255)
gATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTc < 1:1152059/288‑1 (MQ=255)
aTGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTAC‑CCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCg > 2:1530163/1‑255 (MQ=255)
atcGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGTCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAATACAAACGCGACGATAGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTACGCGAACCAGCCGTGC‑ACCACAATGCGGTATTGTTATCTGTTCCATGCGATAACGTTCCTTCa > 1:1106128/3‑289 (MQ=255)
aaCGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATTCGATAACGTTCCTTCa > 2:264128/1‑289 (MQ=255)
aCGCCTTTCGGAGACCGATTTTTTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAg < 2:577685/289‑1 (MQ=255)
cGCATTTCTGCGACCGGTTTTGTAGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTGTCAGCTGCGCGAGGATCAAGACACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGGGC‑ACCACAAGGCGGTTTTGTTATCTGTTCCATGCGATAACGTTACTTCAgg > 1:1384074/1‑289 (MQ=255)
aatgtCTGCGACCGGTTTGAGCGCCAATGTTGCCGCCCACCGGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGgag < 2:1135244/285‑1 (MQ=255)
cGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg > 2:1289145/1‑224 (MQ=255)
cGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAg < 1:1289145/224‑1 (MQ=255)
gACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTa < 1:587981/288‑1 (MQ=255)
aaCCGGTTATGTGGCCGAGTATGCCGCCAACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTa < 2:450879/287‑1 (MQ=255)
ccGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGCATGCCACCGGCAATCCGGTACGCGATCCAGCCGTGC‑TCCACACTCCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGCAGAGTGGTTAt > 2:1904241/1‑287 (MQ=255)
ttttGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatca < 1:665491/289‑1 (MQ=255)
gtttGTCGCCAATGGAGCGACCCACCGGCGCGCGGGGAACCATTCGTGCGGTCGGGA‑TGGCTGAGAAAGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCAGGAGGATCAAGCCACCAACGGCATTACTCAAGCAGAC‑ACGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATtcatc < 2:992595/287‑1 (MQ=255)
tgtGTCGCCGATGATTGCGCCAACCAGCGCGCCGTGAAACTGTCCGGCGGT‑GAGAGTGGCTGAGAATGTGGATGTGTTGGAATTATCTGTCCAGCCAAACGCTTTCAGCTGCACGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AATCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCaa < 2:1801070/287‑1 (MQ=255)
ttGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCaaa < 1:178573/289‑1 (MQ=255)
cGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCg < 1:1029224/289‑1 (MQ=255)
gCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGt < 1:167638/289‑1 (MQ=255)
aaTGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAg > 2:477523/1‑289 (MQ=255)
tgCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATg < 1:1131783/289‑1 (MQ=255)
cgccCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGAt < 2:276749/288‑1 (MQ=255)
gcACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGAt < 2:829671/286‑1 (MQ=255)
cACCGAGAAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCg > 2:783171/1‑289 (MQ=255)
agaAACATTCCGGCGGTCGTGA‑TTGCTGAGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCGGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGGCGTACGTCTTGATCAATTTGATTGCGGcttt > 2:1335009/1‑289 (MQ=255)
tgagAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAAc > 2:1855679/4‑200 (MQ=255)
tgagAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTcgc < 1:190178/286‑1 (MQ=255)
cTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcga < 1:1522146/288‑4 (MQ=255)
ggtggAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcgacaggc < 1:635188/289‑9 (MQ=255)
ggtgaAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCACGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcgacagg < 1:450450/288‑8 (MQ=255)
gtggAATTATCTGTCTAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑CAGCAAGCCAAACGCGACGAGGGCAAACA‑TTTATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGCTTTCTTTGCTGTTCCATGCGTTAACGTTCCTTCAGGAGAGTGGTTATTTATCAAAGTGGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACACTTCGCGCCAtttgtataggcc > 2:655209/1‑279 (MQ=255)
gtggAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGcc > 1:432370/1‑289 (MQ=255)
gAATTATCTGTCCAGCCTAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGAt > 2:956955/1‑289 (MQ=255)
aaTTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGAt < 1:418069/288‑1 (MQ=255)
aTTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATa < 1:616136/288‑1 (MQ=255)
cTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcga > 2:224625/1‑270 (MQ=255)
cTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcga < 1:224625/273‑4 (MQ=255)
tCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTg > 1:248189/1‑289 (MQ=255)
cccAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAACCGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGatcat < 2:1495860/289‑1 (MQ=255)
cccAACCCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGatcat < 1:1389374/289‑1 (MQ=255)
acgtcttaaGCTGCTCGCGGACAAAGCCACCAACGGAATTCCTCCTGCAGGA‑AAGCAAGCCAAACGCGTGGATGGCAAACA‑TTGATGAATGCCAGCGTCAATCCGGTAAGCTATCCAGCCGTGC‑ACCTCAATGCGTTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGt < 2:730549/281‑1 (MQ=255)
aCGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGt < 1:1628104/289‑1 (MQ=255)
aCGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGAATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGt < 1:1764959/289‑1 (MQ=255)
cGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATa > 1:187086/1‑270 (MQ=255)
tCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACt > 1:897597/1‑289 (MQ=255)
cgAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCaaa > 1:1552518/1‑228 (MQ=255)
gataaaccaaccaACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGcgccg < 2:1088785/279‑1 (MQ=255)
gATCAGCCCACAACCGGCATTACCCCAGCAGAC‑AAGCAACCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGcgccg < 1:1407970/288‑1 (MQ=255)
aTCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TGGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGcgccg < 1:766729/287‑1 (MQ=255)
aTCAAGCAACAAACGGCATTACGCCAGC‑GACAAAGAAAGCCAAACGGGACGATGGCAAACA‑TTGAGGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCt < 2:1624735/289‑1 (MQ=255)
tCAAGCCACCAACGGCATTACTCAAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCt < 1:2999/288‑1 (MQ=255)
caccaACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTaa < 2:1385299/288‑1 (MQ=255)
caccaACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTaa < 1:994295/288‑1 (MQ=255)
accaACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATa > 2:1472940/1‑289 (MQ=255)
caACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTaa > 1:518624/1‑285 (MQ=255)
caACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAg > 1:1478002/1‑288 (MQ=255)
ggaaTTACACCAGCAGAA‑AGGCAACCCAAACGCGCCGGTGGCAAACA‑TTGAGGAATGCCAGCGGCAATCCGGTAAGCGATCCGGCCGTGC‑ACCACAGTGCGGTTTTGTTATCTTCTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCAGTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGa < 2:1492735/286‑1 (MQ=255)
cATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGTTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATa < 2:589002/289‑1 (MQ=255)
cATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTgcga < 1:1546095/225‑4 (MQ=255)
agAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGcc < 1:369197/287‑1 (MQ=255)
aC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGACGAATAGCCTGATAGCGTTACGCCatga > 1:1002959/1‑286 (MQ=255)
c‑aagcaagCCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCCCTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGCTGCGTGATCATTCGTTTGACTTTGATTGCCCCGCTGGCTCATTGGCTGATAGCGTTACGCCattag > 2:600461/1‑285 (MQ=255)
aagcaagcCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTCAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTCTTCCATGCGATAACGTTCCTTCAGTAGAGTGGTTATTCAACAAAGTCGTAAGTCATGACTACTTTGATTCCGGTTTTATAGACCATCGCAGTAAACCCTTCGCGTCATTGCTACCGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATGGCCCCGCCGGCTACTAGACTGTGAGTGTTAGGCCattacg > 2:890569/1‑284 (MQ=255)
aagcaagcCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCTCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTTATAGCGCCGCTGGCTAATAGCCGTATAGCGTTACGCCatgagg > 2:402117/1‑284 (MQ=255)
aagcaagcCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCatgagg > 1:1729828/1‑284 (MQ=255)
aagcCAAACGCGACGATGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCatgaggtg < 1:1059590/287‑8 (MQ=255)
aaaaCGCGAACATGGCAAACATTACT‑GAAGGCAAGCGGCAATCCGGTAACGGATCCAGCCGTGC‑CCCACAATGCGGTTTTGTTATCTTTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCATGAGGTGGa < 2:116271/284‑1 (MQ=255)
acgaTGGCAAACA‑TTGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCATGAGGTGGAGTCATAGGCCat > 1:949869/1‑289 (MQ=255)
cgaTGGCAAACA‑TGGATGAATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGCGACAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCATGAGGTGGAGTCATAGGCCata < 1:1346428/289‑1 (MQ=255)
||||||
TAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCGCCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTGA‑TTGCACTGAATGTGGCTGTGGTGGAATTATCTGTCCAGCCCAACGCTTTCAGCTGCGCGAGGATCAAGCCACCAACGGCATTACTCCAGCAGAC‑AAGCAAGCCAAACGCGACGATGGCAAACA‑TACTACTATGCCAGCGGCAATCCGGTAAGCGATCCAGCCGTGC‑ACCACAATGCGGTTTTGTTATCTGTTCCATGCGATAACGTTCCTTCAGGAGAGTGGTTATTCATCAAAGTCGTAAGTCATGATCACTTTGATTGCGGTTTTATCGACCATCGCATCAAACCCTTCGCGCCATTGGCTCAGGCCGATACGATGCGTGATCATCGGTTTGACTTTGATAGCGCCGCTGGCTAATAGCCTGATAGCGTTACGCCAACTGGTGGAGTCATAGGCCATA > CP042583/1541943‑1542489
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
