Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,561,804 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,561,8040GC99.6% 636.8 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (138/130);  minor base T (0/1);  total (138/132)
Fisher's exact test for biased strand distribution p-value = 4.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,561,8050CG100.0% 639.6 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (138/132);  total (138/132)
*CP0425831,561,8060TA99.3% 636.4 / NA 270intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (137/131);  minor base C (1/1);  total (138/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

AACCCGATAATTGAATCATTAATCAGGCATGCTCCAGACTAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCACTCGTCGCCAGCC‑TACTAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGAGCTCAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGGCTCGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCA  >  CP042583/1561527‑1562089
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                            
aaCCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGcc                                                                                                                                                                                                                                                                                     >  2:1329050/1‑289 (MQ=255)
 aCCCGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGTCAAAATACTGGCGTAAAAATTCTACCGTTAGCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCg                                                                                                                                                                                                                                                                                    <  1:370073/289‑1 (MQ=255)
   ccGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGt                                                                                                                                                                                                                                                                                  <  1:271696/289‑1 (MQ=255)
   ccGATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGt                                                                                                                                                                                                                                                                                  <  1:602123/289‑1 (MQ=255)
     gATAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCTGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTg                                                                                                                                                                                                                                                                                 >  2:339915/1‑288 (MQ=255)
      aTAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTg                                                                                                                                                                                                                                                                                 >  2:1633505/1‑287 (MQ=255)
      aTAATTGAATCATTAATCAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTg                                                                                                                                                                                                                                                                                 >  1:1332135/1‑287 (MQ=255)
                       cAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGc                                                                                                                                                                                                                                                              <  2:557855/289‑1 (MQ=255)
                       cAGGCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGc                                                                                                                                                                                                                                                              <  1:1390206/289‑1 (MQ=255)
                          gCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCct                                                                                                                                                                                                                                                            >  1:233586/1‑288 (MQ=255)
                          gCATGCTCCAGTGAAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCct                                                                                                                                                                                                                                                            >  2:1464238/1‑288 (MQ=255)
                               ctccagtgaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTa                                                                                                                                                                                                                                                     >  1:175622/10‑289 (MQ=255)
                               ctccagtgaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTa                                                                                                                                                                                                                                                     >  2:1005078/10‑289 (MQ=255)
                                    gtgaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGc                                                                                                                                                                                                                                                              <  2:1613221/272‑1 (MQ=255)
                                    gtgaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCg                                                                                                                                                                                                                                                >  1:1128586/5‑289 (MQ=255)
                                    gtgaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCg                                                                                                                                                                                                                                                >  2:497570/5‑289 (MQ=255)
                                      gaaaaaTTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAACCGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGt                                                                                                                                                                                                                                               <  2:1592318/286‑1 (MQ=255)
                                            atcaggTAGTGCTCGGCAAAATACTGTCGTAAAAATTGTACCGTTACCCGCTCTTTCGCTGTCGTCGCCGGCA‑TTGAAACATAACAGGCCCAGCCGTTCGCTGGCTGGTAATATTCCGGTAGAACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGcc                                                                                                                                                                                                                                        <  2:739291/285‑1 (MQ=255)
                                             tCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTTTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCa                                                                                                                                                                                                                                       <  2:1305523/289‑1 (MQ=255)
                                                ggtatggCTGGGCAAAATACTTGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTGGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGa                                                                                                                                                                                                                                     <  2:233586/282‑1 (MQ=255)
                                                      gttctgCAAAATATTGTCATAAAGATTCTCCCTCTCTCCGCACATTCGCTGACGTCGACAGCC‑TTGAAACATAAACGGCCCAGACGTGCGCTGGCTGGTAATATTCCGCTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCCCTAACATCCCACCATGAACTCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCaa                                                                                                                                                                                                                               <  2:765133/283‑1 (MQ=255)
                                                          ggCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCGAGACACCAAAAGga                                                                                                                                                                                                                          <  1:497570/289‑1 (MQ=255)
                                                               aaTACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCCTTGAAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCaaaa                                                                                                                                                                                                                             >  1:39912/1‑282 (MQ=255)
                                                               aaTACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATgggg                                                                                                                                                                                                                                                                >  2:994110/1‑247 (MQ=255)
                                                               aaTACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATc                                                                                                                                                                                                                     >  1:1750812/1‑289 (MQ=255)
                                                                 tACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATcgc                                                                                                                                                                                                                   >  1:1351472/1‑289 (MQ=255)
                                                                   cTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCTGACGTCGCAAGCC‑TTGAAACATAAACGGCCCAGACGGTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATGgcgc                                                                                                                                                                                                                 <  1:1089873/289‑1 (MQ=255)
                                                                    cggCGTAAAAATTCTACCGTTATCCGCACTTGCGATGACGTCGCCAGCC‑TTGAAACATAAACGGCCCTGACGTTCGCTGGCTGGTACTATTCCGGTAGCACTTGCACTAAATGACCCCTGGCAATGGTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCACATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGct                                                                                                                                                                                                                <  2:1197070/288‑1 (MQ=255)
                                                                             aaTTCTACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGa                                                                                                                                                                                                       <  2:1897006/289‑1 (MQ=255)
                                                                                  tACCGTTATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAgg                                                                                                                                                                                                  <  2:1042529/289‑1 (MQ=255)
                                                                                        tATCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACgg                                                                                                                                                                                             <  1:1173755/288‑1 (MQ=255)
                                                                                         aTCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACTGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATCTCGCCACTATTAGACGACAGGGGGCCGGTGACTTTCAGCGCATGGGGGCCTT‑CTTTATTCCGTAATTGCCAGACACTAAACGTGTGATCGACCTCTCTAATCACCAGGCACGGCa                                                                                                                                                                                           >  2:1657606/1‑289 (MQ=255)
                                                                                          tCCGCACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTaa                                                                                                                                                                                                                                             <  1:321410/238‑1 (MQ=255)
                                                                                              cACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCa                                                                                                                                                                                      >  1:943629/1‑289 (MQ=255)
                                                                                              cACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCa                                                                                                                                                                                      <  2:1128586/289‑1 (MQ=255)
                                                                                              cACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCa                                                                                                                                                                                      >  1:757799/1‑289 (MQ=255)
                                                                                              cACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCa                                                                                                                                                                                      >  2:1347940/1‑289 (MQ=255)
                                                                                              cACTTTCGCTGACGTCGCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCa                                                                                                                                                                                      >  2:1366830/1‑289 (MQ=255)
                                                                                                   tcgctgacgtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAg                                                                                                                                                                                 >  2:1251471/8‑289 (MQ=255)
                                                                                                    cgctgacgtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCa                                                                                                                                                                                                                                                                     <  1:101457/199‑1 (MQ=255)
                                                                                                     gctgacgtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGAt                                                                                                                                                                               <  1:1464238/284‑1 (MQ=255)
                                                                                                      ctgacgtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATc                                                                                                                                                                              >  2:929760/5‑289 (MQ=255)
                                                                                                         acgtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGt                                                                                                                                                                           >  2:1029932/2‑289 (MQ=255)
                                                                                                           gtcgCCAGCC‑TTGAAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACCCCAAAAGGATGATCGGGCTCTTTAAGGACCAGGCACGGCAAGTCAGAAAGATCGGTTa                                                                                                                                                                         >  2:267092/1‑289 (MQ=255)
                                                                                                                     tgtacaaCACAAACGGGCAAGACGTTCGCTGGCTGGTATTATTCCGGTAGCACTTGCACTAAATGACCGCTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGACCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCg                                                                                                                                                                <  2:1114727/284‑1 (MQ=255)
                                                                                                                     cttggaaCATAAACAGCCCCGAACTTCGCTGGCTGGTAATCTTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCGAACATCCCGCCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCg                                                                                                                                                                <  2:798680/284‑1 (MQ=255)
                                                                                                                     cttgaaaCATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCg                                                                                                                                                                <  1:1251471/284‑1 (MQ=255)
                                                                                                                     cttgaaaCATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCg                                                                                                                                                                <  1:1005078/284‑1 (MQ=255)
                                                                                                                              tAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCGTT‑CTTTATTGCGTAATTGCCAGACCCCAAAAGGATGATCGCCCCTTTTAATGACCAGGCACGGCAATGCAGGAAGATCGGTTAAATTGTTCggacggccat                                                                                                                                                       >  2:1555804/1‑281 (MQ=255)
                                                                                                                              tAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGCCACCACAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAACGAACGGTTAAATGTTTCGGCTCGCCAt                                                                                                                                                       >  2:1516273/1‑289 (MQ=255)
                                                                                                                              tAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGa                                                                                                                                                                                                       <  1:1314514/241‑1 (MQ=255)
                                                                                                                              tAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCAt                                                                                                                                                       >  1:157144/1‑289 (MQ=255)
                                                                                                                              tAAACGGCCCAGACGTTCGCTCGCTGGTAATATTCCGGTAGCACTTGCACTCAATGACCCCTGGCAATGTTCTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCCCCCTGATTAGACGACAGCTGGCCGGTTACTTTAATCGCCTGGCGGCCTTCCTTTTTTGC‑TACTTCCCAGACACCACACGGATGATCGCGCTCTTTCATGACCTGGCACCGCAATGGCGACAGATCGGGTAAAAGTTTCGGCGCGccct                                                                                                                                                       >  2:1673750/1‑287 (MQ=255)
                                                                                                                                  cGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTg                                                                                                                                                   <  2:1857301/289‑1 (MQ=255)
                                                                                                                                     cccAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTTCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCCCGCCCTGCTgcgc                                                                                                                                                >  2:1830186/1‑289 (MQ=255)
                                                                                                                                     cccAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCa                                                                                                                                                                                           <  1:983158/246‑1 (MQ=255)
                                                                                                                                     cccAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCa                                                                                                                                                                                           >  2:983158/1‑246 (MQ=255)
                                                                                                                                      ccAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCa                                                                                                                                               >  1:1528946/1‑289 (MQ=255)
                                                                                                                                          aCGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGAACGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGAGCGGTTAAATGTTTCGGCGCGCCATGTTGAGCAATaa                                                                                                                                           >  1:930805/1‑289 (MQ=255)
                                                                                                                                          aCGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCAT‑GGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCCCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCCTGTTGCCCAATaaa                                                                                                                                          >  1:925012/1‑289 (MQ=255)
                                                                                                                                               cGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTGGCGCAATAAATTcc                                                                                                                                      >  1:1035287/1‑289 (MQ=255)
                                                                                                                                                    gctggTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCggcg                                                                                                                                  >  1:1144741/1‑286 (MQ=255)
                                                                                                                                                         tAATATTCCGGTAGCACTTGCACTAAAGGACCCCTGGCAAGGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCggcgacgcgc                                                                                                                            <  2:403129/289‑9 (MQ=255)
                                                                                                                                                          acaagcacaagaacACCTGAACTAAAAGAGCGCTGAACATGTTTTAGCTAACTAACCACCATGAAGTCAGAGCAAAACCCTGCACATCGAGACACCACTGATGGACAATTTCACCACGTTTATACGACCGTGGGCCGGTGACATTAATCGCATGGGGGCCTT‑CTTTATGGCGTAATTGCCAGAAACCAAAAGCATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAAATCGGCTAAATGTTTCTGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCa                                                                                                                           <  2:1162646/276‑1 (MQ=255)
                                                                                                                                                          aaTATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCggcgacgcgc                                                                                                                            <  1:1886825/288‑9 (MQ=255)
                                                                                                                                                              ttCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGGTGCGCAATAAATTCCggcgacgcggagaaa                                                                                                                       >  2:63713/1‑276 (MQ=255)
                                                                                                                                                                   gTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGGCAGCCACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGCTCGGTTAAATGTTTCGCCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAAAAcc                                                                                                                  >  1:609263/1‑288 (MQ=255)
                                                                                                                                                                      gCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGt                                                                                                                <  1:339915/288‑1 (MQ=255)
                                                                                                                                                                         cTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAAtt                                                                                                            >  1:1247495/1‑289 (MQ=255)
                                                                                                                                                                               cTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGc                                                                                                      <  1:1236192/289‑1 (MQ=255)
                                                                                                                                                                                  aaTGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAg                                                                                                   >  1:185372/1‑289 (MQ=255)
                                                                                                                                                                                      aCCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCggcgacgcgc                                                                                                                            >  1:775843/1‑252 (MQ=255)
                                                                                                                                                                                       ccACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGc                                                                                              >  1:149480/1‑289 (MQ=255)
                                                                                                                                                                                          cTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCAGGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCTACGCGCATAGAATACGGTAATTGGTCGCCACTTTGCcgg                                                                                           >  2:214778/1‑289 (MQ=255)
                                                                                                                                                                                            ggCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGc                                                                                                                                                                                                                                                              >  1:1622952/1‑125 (MQ=255)
                                                                                                                                                                                            ggCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCg                                                                                         >  1:464254/1‑289 (MQ=255)
                                                                                                                                                                                               aaTGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGAt                                                                                       <  2:1750812/288‑1 (MQ=255)
                                                                                                                                                                                                     ttCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTa                                                                                <  1:1633505/289‑1 (MQ=255)
                                                                                                                                                                                                           aaCATCCCACCAGGACCGCACAGCACTCCCCTGCCCATCGCGACACCACTGATGGACAATTTCTCCATTATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGTGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCg                                                                          <  1:920661/289‑1 (MQ=255)
                                                                                                                                                                                                           aaCATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCg                                                                          <  1:1830186/289‑1 (MQ=255)
                                                                                                                                                                                                           aaCATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCg                                                                          <  1:1705872/289‑1 (MQ=255)
                                                                                                                                                                                                             cATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGAt                                                                        >  2:668915/1‑289 (MQ=255)
                                                                                                                                                                                                                     cgggAACGCACCTCATTCCCCTGCCCACCGAGACACCACTGTTGGACGATTTTTCCATGATTAGATGACAGTAGGTCGGTGACTTTAATCGTATGGGTGACTT‑CTTTATTGCGTAATCGCCCGACCCCAAAAGGATGATCGCGCCCTTTAATGCCCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTGCGGCGCGCCATGTTGCGCTATAAATCCCGGCGACGCGCAGAAAACACGGTAATTGGTCGCCAGTTTGCGGGCGTTTAAATTAGGGGCGATGTCATCGc                                                                <  2:711144/287‑1 (MQ=255)
                                                                                                                                                                                                                         aaCGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGcc                                                               <  1:1096041/286‑1 (MQ=255)
                                                                                                                                                                                                                              agagCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAATATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTGATTGGTCGCCAGTTTGTGTGCGCTTAAATTAGGGGCGCTGTACGCGCCAATCCgca                                                       >  2:4697/1‑287 (MQ=255)
                                                                                                                                                                                                                                agCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCg                                                         <  1:1745652/285‑1 (MQ=255)
                                                                                                                                                                                                                                        ccTACCCAGCGAGACGCCACTGATGGAACATTTCTCCATGATTGGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCATT‑CTTTATGGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATc                                             <  2:1738310/289‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCg                                            >  1:1112699/1‑288 (MQ=255)
                                                                                                                                                                                                                                               aTCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGacac                                        <  2:1182001/287‑1 (MQ=255)
                                                                                                                                                                                                                                               aTCGAGACACCACTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCt                                      >  1:84999/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      caccacTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAAGGCGAATATCGAGATCGACACCTTCATTg                                >  2:321325/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           cTGATGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATTGCCAATGCGAATATCGAGATCGAACACTTCATTTACCaaa                          >  2:1287601/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              aTGGACAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCg                       >  2:783753/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   cAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTTACCAAAAAGAccc                   >  2:526620/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                   cAATTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAg                  >  1:956569/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    aaTTTCTCCATGATTAGACGACGGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGt                 <  2:1629655/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaTTTCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGt                 <  1:64540/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tttCTCCATGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATAGCGAGAGCGACAACTTTATGGACCAAATCGACCAGtac               >  2:371360/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             aTGATTAGACGACAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTcc        <  1:547571/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  tgaccgtCAGTGGGCCGGTGACTTTATTCGCAT‑GGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGCGACGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCa  <  2:925012/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                            
AACCCGATAATTGAATCATTAATCAGGCATGCTCCAGACTAAAATTCGGGTAGTGCTCGGCAAAATACTGGCGTAAAAATTCTACCGTTATCCGCACTTTCGCACTCGTCGCCAGCC‑TACTAACATAAACGGCCCAGACGTTCGCTGGCTGGTAATATTCCGGTAGCACTTGCACTAAATGACCACTGGCAATGTTTTCGCTAACATCCCACCAGGAACGCAGAGCAATCCCCTGCCCATCGAGACACCACTGATGGACAATTTCTCCATGATTAGAGCTCAGTGGGCCGGTGACTTTAATCGCATGGGGGCCTT‑CTTTATTGCGTAATTGCCAGACACCAAAAGGATGATCGCGCTCTTTAATGACCAGGCACGGCAATGCAGAAAGATCGGTTAAATGTTTCGGCGCGCCATGTTGCGCAATAAATTCCGGGCTCGCGCAGAGAATACGGTAATTGGTCGCCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCA  >  CP042583/1561527‑1562089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A