Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,563,403 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,563,4030AT98.7% 538.0 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (122/109);  minor base G (1/2);  total (124/112)
Fisher's exact test for biased strand distribution p-value = 6.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01
*CP0425831,563,4040GC98.7% 541.4 / ‑6.3 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (123/109);  total (124/112)
Fisher's exact test for biased strand distribution p-value = 6.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01
*CP0425831,563,4050CG98.3% 521.1 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/1);  new base G (120/110);  total (124/112)
Fisher's exact test for biased strand distribution p-value = 6.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 236 total aligned reads displayed.

ACACTAACTTCTGCCACTAAAAGCAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGAGCCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCAGTTTATTTGAA  >  CP042583/1563127‑1563681
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
acgttAACTTCTGGCCCTTAATCGAACGGGTTAGCCATCAGCGTGCCGTACTGGGATGAGCGAGTGGAAGGAATGGCCGGGAATTACCCGGAGATCCGCTGGGACAAGGGGCATATTGGTTTTGTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTTGCTCTTCGAg                                                                                                                                                                                                                                                                               <  2:151803/284‑1 (MQ=255)
acacTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGc                                                                                                                                                                                                                                                                              <  1:378236/289‑1 (MQ=255)
 cacTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAg                                                                                                                                                                                                                                                                               >  1:737152/1‑287 (MQ=255)
 cacTAACTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGc                                                                                                                                                                                                                                                                              <  1:1561011/288‑1 (MQ=255)
      aCTTCTGCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGc                                                                                                                                                                                                                                                                              <  1:1048242/283‑1 (MQ=255)
            gCCACTAAATCGAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGt                                                                                                                                                                                                                                                                   >  1:1088266/1‑288 (MQ=255)
                        aaCGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGata                                                                                                                                                                                                                                                      >  1:9942/1‑289 (MQ=255)
                              ttAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTAc                                                                                                                                                                                                                                                 <  1:837433/288‑1 (MQ=255)
                                   cATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGaa                                                                                                                                                                                                                                            <  1:102661/288‑1 (MQ=255)
                                     tCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGCTTTGTGAT‑GCAGCCGGCACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCACCCTGCATCCGGACCGCACTTTCCCGTCGCCCTTCGCTCCTGTCCCCCGTTCCGCGCCGGCGTTCCACGGGaccaa                                                                                                                                                                                                                                         >  2:1368430/1‑285 (MQ=255)
                                     acacaaTGCCGGACTGGTAGGGGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGaaaaa                                                                                                                                                                                                                                         <  2:1180311/284‑1 (MQ=255)
                                      cAGCATGGCGTACTGGGATGGGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCGGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAat                                                                                                                                                                                                                                        <  2:584482/289‑1 (MQ=255)
                                       aGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAata                                                                                                                                                                                                                                       >  1:1196872/1‑289 (MQ=255)
                                           tGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAat                                                                                                                                                                                                                                        >  1:789940/1‑284 (MQ=255)
                                                   tGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCCCTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATAGTGCCTAAccta                                                                                                                                                                                                                           >  2:1652206/1‑287 (MQ=255)
                                                     ggATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATc                                                                                                                                                                                                                        >  2:831176/1‑289 (MQ=255)
                                                       aTGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCCCTTCGAGCCTGTCCACGGTTCCGCCCCGGATATCTACGGGAAAAAGCTTG‑CTAACCCCATcc                                                                                                                                                                                                                       >  2:1593043/1‑287 (MQ=255)
                                                          aGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGTCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAAACCGGACCGCCCTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCCCCGGATATCTACGGGAAAAATATTC‑GTAACCCTATTGcct                                                                                                                                                                                                                    >  2:3875/1‑287 (MQ=255)
                                                          aGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCTACGGTTCCGCTCCGGATATCTCCGGGCAAAATATCG‑CTAACCCTATCGCCAc                                                                                                                                                                                                                   >  2:1262860/1‑289 (MQ=255)
                                                               gTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCCCGGTTCCGCCCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCCCGCttt                                                                                                                                                                                                              >  2:98449/1‑289 (MQ=255)
                                                               gTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCCACGGGCAAAATATTG‑CTCACCCTATCGCCCCGCttt                                                                                                                                                                                                              >  2:429210/1‑289 (MQ=255)
                                                                    atcAAGGGCCGGGAATTACCCGGGGATCCGCTGGGACAGGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          <  2:1846715/286‑1 (MQ=255)
                                                                    aGCAATGGCGGGGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGTTATTCTCTGAGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          <  2:851699/288‑1 (MQ=255)
                                                                    aGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAAccc                                                                                                                                                                                                                            >  1:1868309/1‑270 (MQ=255)
                                                                    aGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          <  2:715243/288‑1 (MQ=255)
                                                                    aGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          <  2:737152/288‑1 (MQ=255)
                                                                      cAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCg                                                                                                                                                                                                        <  1:1365026/288‑1 (MQ=255)
                                                                         tGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAACAATATTG‑CTAACCCTATCGCCTCGACTTGGTCCGGGGc                                                                                                                                                                                                    >  2:1528909/1‑289 (MQ=255)
                                                                                    tACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCg                                                                                                                                                                                         <  1:855531/289‑1 (MQ=255)
                                                                                     aCCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGa                                                                                                                                                                                        >  1:220028/1‑289 (MQ=255)
                                                                                           agaTCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTtc                                                                                                                                                                                   >  2:569764/1‑288 (MQ=255)
                                                                                           agaTCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTtc                                                                                                                                                                                   >  2:418836/1‑288 (MQ=255)
                                                                                                cGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCa                                                                                                                                                                             <  1:1371224/289‑1 (MQ=255)
                                                                                                cGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCa                                                                                                                                                                             <  1:586973/289‑1 (MQ=255)
                                                                                                    gggCCAAGAAGCATATTGTTATTGTCTGGGAGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATg                                                                                                                                                                          <  2:1784028/288‑1 (MQ=255)
                                                                                                     ggACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGcc                                                                                                                                                                                                                     <  1:1416793/244‑1 (MQ=255)
                                                                                                     ggACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          >  2:785391/1‑255 (MQ=255)
                                                                                                          agcagcATATTGTTCTTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGTTCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGa                                                                                                                                                                   <  1:1209229/289‑1 (MQ=255)
                                                                                                           gcagcaTATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGa                                                                                                                                                                   >  1:620556/1‑288 (MQ=255)
                                                                                                                       tatTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCaa                                                                                                                                                     <  1:646955/289‑1 (MQ=255)
                                                                                                                         ttCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAgc                                                                                                                                                   >  1:1899626/1‑289 (MQ=255)
                                                                                                                            tctGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCa                                                                                                                                                >  1:1615658/1‑289 (MQ=255)
                                                                                                                            tctGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCa                                                                                                                                                <  1:1755805/289‑1 (MQ=255)
                                                                                                                             ctGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCa                                                                                                                                                <  1:1271524/288‑1 (MQ=255)
                                                                                                                              tGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑Tccagccaggccaca                                                                                                                                              >  2:1322703/1‑283 (MQ=255)
                                                                                                                              tGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTACCCGGCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGTATAGGGACGGGGCAAGGATGACCGAGTTTCTCGGCCATGGCGATGAGCGTTGTCCCGCAGgcgctc                                                                                                                                               >  2:1538973/1‑287 (MQ=255)
                                                                                                                                cgcgcgTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAAGGATGCTTGATTTTCTCGGCCAGGGAGATGCGCGTT‑TCCGGCAAGCGCCTaaa                                                                                                                                            >  2:761330/1‑288 (MQ=255)
                                                                                                                                     gctttGTGGTGGCAGCCGGAACGATTCGATGTGGTGTGGGCGTCCCATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGt                                                                                                                                         <  2:639210/286‑1 (MQ=255)
                                                                                                                                            gAT‑GCAGCCGGAACGATTCGATTTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGgc                                                                                                                                 <  2:509395/288‑1 (MQ=255)
                                                                                                                                               gtacgCCGGAACGGTTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGgcagc                                                                                                                              <  2:220028/285‑1 (MQ=255)
                                                                                                                                                 cAGCCGGAACTATTCGATGAGGTGTTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCaa                                                                                                                            <  1:43180/289‑1 (MQ=255)
                                                                                                                                                  aGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAAt                                                                                                                           >  1:1527454/1‑289 (MQ=255)
                                                                                                                                                           gATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGt                                                                                                                  <  1:482893/289‑1 (MQ=255)
                                                                                                                                                             ttCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGAtttt                                                                                                                                                                                    <  2:286662/222‑1 (MQ=255)
                                                                                                                                                             ttCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGAtttt                                                                                                                                                                                    >  1:286662/1‑222 (MQ=255)
                                                                                                                                                             ttCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGc                                                                                                                                                       <  2:1406780/250‑1 (MQ=255)
                                                                                                                                                             ttCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGa                                                                                                                >  2:626473/1‑289 (MQ=255)
                                                                                                                                                              tCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGAt                                                                                                               <  1:1652206/289‑1 (MQ=255)
                                                                                                                                                                     ggtggtggCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCAc                                                                                                        <  1:867099/289‑1 (MQ=255)
                                                                                                                                                                      gtggtggCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCa                                                                                                                                                                             <  1:146458/220‑1 (MQ=255)
                                                                                                                                                                      gtggtggCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACg                                                                                                       >  1:1796628/1‑289 (MQ=255)
                                                                                                                                                                        ggtggCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACggg                                                                                                     <  1:768898/289‑1 (MQ=255)
                                                                                                                                                                             gttCCCATTTGTTTGGCGTTTTCCTTTCCTATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGa                                                                                                 <  2:919538/286‑1 (MQ=255)
                                                                                                                                                                              gTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCCTTGGCAGTGCCCCATCCGCCAACCTGAATCCGGAACGCACTGTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAGAATAATG‑CTAACCCTATCGCCACGCTTCGGGCCGTGGCAATGATGATCGATTTTCTCGTCACTGGCGATGCGCGTT‑TCCATCCAGCGCATAACGGTAATCTTGCTGCCATTTAAGAGGTTGTTGCTGACAGGGCGaaa                                                                                               >  2:1218209/1‑289 (MQ=255)
                                                                                                                                                                              gTCCAATTTGTTTGGCGATATCCTTTCCGATCGTGGCCCGGCCGGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGaa                                                                                                <  1:1505517/288‑1 (MQ=255)
                                                                                                                                                                                ccATTTTGTTTGCGTCTATCCTTTCCGTCCTGGGCCCGGCCTGCACCGGCACCATTGGAATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGaaaa                                                                                              <  2:1128061/288‑1 (MQ=255)
                                                                                                                                                                                caaaTTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGaaaa                                                                                              <  1:1593043/286‑1 (MQ=255)
                                                                                                                                                                                 cAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCATTGGCGATGAGCGTT‑TCCAGCAAGCGCAAAACGGTTTTCTGGCAGCAATGGAAGAAGTGCTTGACTACGGGCCGaaaaag                                                                                            >  2:1807313/1‑287 (MQ=255)
                                                                                                                                                                                    tttgtttcggtgtatCCTTTCCGCTCTTGGCCCGGCCTGCACCGGCACCATTGGAATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCt                                                                                         <  2:1235381/277‑1 (MQ=255)
                                                                                                                                                                                    ttgttttgGTGATTTCCTTTCCGATCTTAGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCt                                                                                         <  2:1039968/285‑1 (MQ=255)
                                                                                                                                                                                     ttgtttgGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTg                                                                                        <  1:761330/289‑1 (MQ=255)
                                                                                                                                                                                          tgGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCgggg                                                                                                                                                                                                     <  1:1731018/176‑1 (MQ=255)
                                                                                                                                                                                          tgGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCgggg                                                                                                                                                                                                     >  2:1731018/1‑176 (MQ=255)
                                                                                                                                                                                                  tCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCaa                                                                           >  1:699653/1‑289 (MQ=255)
                                                                                                                                                                                                        ccGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGccac                                                                     <  1:1349199/289‑1 (MQ=255)
                                                                                                                                                                                                            tCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCcaccac                                                                  <  2:1246809/288‑1 (MQ=255)
                                                                                                                                                                                                              ttGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACAACTGATATGAAAGGCAATGCCACCACGc                                                                >  2:826086/1‑288 (MQ=255)
                                                                                                                                                                                                               tGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCca                                                              <  1:420638/289‑1 (MQ=255)
                                                                                                                                                                                                                      gCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGtt                                                        >  1:1315360/1‑288 (MQ=255)
                                                                                                                                                                                                                      gCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGtt                                                        >  1:508353/1‑288 (MQ=255)
                                                                                                                                                                                                                                   cctttGGCCGTGCCCCATCCGCCAACTTGATTCCGGAACGCACTTACCCGTCGAGCTTCGAGCCTGTCCACGGTTCCGAGCCGGATATCTAAGGGAAAAATCTTG‑CTAACCCTCTCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTg                                          <  2:351560/286‑1 (MQ=255)
                                                                                                                                                                                                                                    cATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCca                                                              <  1:1781437/268‑1 (MQ=255)
                                                                                                                                                                                                                                      ttGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGc                                                                                                                                                                                                          >  2:674338/1‑127 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGc                                                                                                                                                                                                                                                                              <  1:1836645/52‑1 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGAtt                                                                                                                                                                                                               >  2:1462018/1‑114 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATTATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATCACGGTATTCTGCCAGCAATTGAAGAAGTGATTGCGCACGGGCCGAAAAGACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAAGTAttt                               >  1:969730/1‑289 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGTTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACTGTCCGAAAACACCTGATAATAAAGGACATGCCACCACGCCACAAGTTGCCGCCGCGATTTGCAAAATTAttt                               >  2:1279115/1‑289 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTgaa                                                                                                                       <  1:201432/201‑1 (MQ=255)
                                                                                                                                                                                                                                              gCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTgaa                                                                                                                       >  2:201432/1‑201 (MQ=255)
                                                                                                                                                                                                                                               ccccATCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGTGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTAtttt                              >  1:82897/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    tCCGCCAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTACTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGtt                         >  1:91093/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        ccAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGTAATTGAAGAAGTGCTTGCTCACGGGCCGAAAAAACCTGATATGAAAGACAATGCCTCAACGCCACAGGCTTCCGGCGCGCGTTGCGAAACTATTTTGCGTTAAgg                     >  1:923672/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         cAACCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGt                    <  1:123033/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCCTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCa                  <  2:272927/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccTGAATCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCaa                 <  1:640577/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             cTGAATCCGGAACGCATTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCaaa                <  1:1526434/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                aaTCCGGAACGCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCa             >  2:106004/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 ttCCGGAACCCACTTTCCCGTCGCCCTTCGACCCGGTCCCCGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCAg            <  2:699653/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gCACTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCAGTTTATTTGa   <  1:519683/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aCTTTCCCGTCGCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCAGTTTATTTGaa  <  1:1262860/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
ACACTAACTTCTGCCACTAAAAGCAACGGTTTAGCCATCAGCATGCCGTACTGGGATGAGCGAGTGGAAGCAATGGCCGAGAATTACCCGGAGATCCGCTGGGACAAGCAGCATATTGATATTCTCTGCGCGCGTTTTGTGAT‑GCAGCCGGAACGATTCGATGTGGTGGTGGCGTCCAATTTGTTTGGCGATATCCTTTCCGATCTTGGCCCGGCCTGCACCGGCACCATTGGCATTGCCCCATCCGCCAACCTGAATCCGGAACGCACTTTCCCGAGCCTCTTCGAGCCTGTCCACGGTTCCGCGCCGGATATCTACGGGAAAAATATTG‑CTAACCCTATCGCCACGATTTGGGCCGGGGCAATGATGCTCGATTTTCTCGGCAATGGCGATGAGCGTT‑TCCAGCAAGCGCATAACGGTATTCTGGCAGCAATTGAAGAAGTGATTGCTCACGGGCCGAAAACACCTGATATGAAAGGCAATGCCACCACGCCACAGGTTGCCGACGCGATTTGCAAAATTATTTTGCGTTAAGGTCAAACCAGTTTATTTGAA  >  CP042583/1563127‑1563681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A