Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP042583 1,645,618 Δ50 bp intergenic (–/–) – / – –/–

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP042583 1645618 1645667 50 270 [0] [1] 271 –/– –/–

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP042583 = 16456170 (0.000)224 (0.980) 125/492 0.1 99.8% intergenic (–/–) –/– –/–
?CP042583 1645668 = 1 (0.000)intergenic (–/–) –/– –/–

GATK/CNVnator alignment

N/A