Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,500,994 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,500,9940AT99.7% 747.0 / NA 313intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (142/169);  total (142/171)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,500,9950CG100.0% 740.5 / NA 313intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (142/171);  total (142/171)
*CP0425831,500,9960TA100.0% 750.7 / NA 313intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (142/171);  total (142/171)

Only 100 of 313 total aligned reads displayed.

ATTAATACGGATTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGACTTTTGGCACTCAACGCCACCATATTCTCCAGCGCGCTTTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAAACTAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGGCTAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGGCTACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGT  >  CP042583/1500715‑1501271
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
  tAATACGGATTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCAc                                                                                                                                                                                                                                                                               <  2:1029109/289‑1 (MQ=255)
     ttcGGAATTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGCGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGt                                                                                                                                                                                                                                                                            <  2:1868885/287‑1 (MQ=255)
     tACGGATTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGt                                                                                                                                                                                                                                                                            <  2:378933/289‑1 (MQ=255)
         gATTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTcc                                                                                                                                                                                                                                                                        >  1:619897/1‑289 (MQ=255)
          aTTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTcc                                                                                                                                                                                                                                                                        >  1:1039902/1‑288 (MQ=255)
          aTTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCca                                                                                                                                                                                                                                                                       <  2:1363480/289‑1 (MQ=255)
           tttCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCca                                                                                                                                                                                                                                                                       <  1:1590027/288‑1 (MQ=255)
            ttCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCcaca                                                                                                                                                                                                                                                                     <  2:1879238/289‑1 (MQ=255)
            ttCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCcaca                                                                                                                                                                                                                                                                     <  1:278032/289‑1 (MQ=255)
            ttCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCcaca                                                                                                                                                                                                                                                                     <  1:241505/289‑1 (MQ=255)
                      atCTGCATTGGCGTTTTGCCATATTATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGaa                                                                                                                                                                                                                                                           <  1:1341786/289‑1 (MQ=255)
                         tGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGaaaa                                                                                                                                                                                                                                                         >  1:1655899/1‑288 (MQ=255)
                         tGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAg                                                                                                                                                                                                                                                        <  2:1835988/289‑1 (MQ=255)
                                gCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTAtt                                                                                                                                                                                                                                                 >  1:1198685/1‑289 (MQ=255)
                                    ttttCCATAAGATCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTc                                                                                                                                                                                                                                             <  2:317363/289‑1 (MQ=255)
                                    tttGCCCTAATTACGTTGAGTCGCTCCCGTCAAATATTCCTGTCATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGCTTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTc                                                                                                                                                                                                                                             <  2:733220/289‑1 (MQ=255)
                                    tttGCCATAATCTCGTTGAGTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTc                                                                                                                                                                                                                                             <  2:1894794/289‑1 (MQ=255)
                                                       gTCGCTCGCGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTgcgaagcg                                                                                                                                                                                                                           >  1:717457/1‑281 (MQ=255)
                                                         cgctcgcGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGGGAAAAGCGTTATTGGTCCgg                                                                                                                                                                                                                                          <  2:1551940/271‑1 (MQ=255)
                                                           ctcgcGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGTAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACaaa                                                                                                                                                                                                                      >  2:1917249/1‑289 (MQ=255)
                                                                gTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAAt                                                                                                                                                                                                                <  1:481519/289‑1 (MQ=255)
                                                                  cAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATaa                                                                                                                                                                                                              <  2:1274674/289‑1 (MQ=255)
                                                                     atatTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGc                                                                                                                                                                                                           <  2:1085800/289‑1 (MQ=255)
                                                                       atTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGcaa                                                                                                                                                                                                         <  2:229738/289‑1 (MQ=255)
                                                                            tgtgatttggctgacAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                    <  1:1023739/275‑1 (MQ=255)
                                                                            tgtgatttggctgacAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                    <  1:538083/275‑1 (MQ=255)
                                                                              tgatttggctgacAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                    >  2:1471132/13‑287 (MQ=255)
                                                                                                caccaTATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTTAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCCCaaac                                                                                                                                                                                >  2:1736680/1‑288 (MQ=255)
                                                                                                           ccAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACt                                                                                                                                                                     <  1:1429763/289‑1 (MQ=255)
                                                                                                               cgccgattCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGAt                                                                                                                                                                  >  1:1012594/7‑288 (MQ=255)
                                                                                                               cgccgattCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGAt                                                                                                                                                                  >  1:1070976/7‑288 (MQ=255)
                                                                                                                                  tctTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑Gcgcg                                                                                                                                            <  1:968500/289‑1 (MQ=255)
                                                                                                                                                   ttCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATaa                                                                                                                           <  2:402899/289‑1 (MQ=255)
                                                                                                                                                     cTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTACGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCT‑AAAAAAGCGTTTACTGAACCCAACGTTCAATAT‑‑GCTCGTGGAACCAAACTCATaaaaa                                                                                                                        >  2:663286/1‑289 (MQ=255)
                                                                                                                                                        ccGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACt                                                                                                                      >  1:893174/1‑289 (MQ=255)
                                                                                                                                                           tACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTg                                                                                                                   >  1:751243/1‑289 (MQ=255)
                                                                                                                                                                ttCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggt                                                                                                              <  2:1134510/289‑1 (MQ=255)
                                                                                                                                                                tgcggcaaCTGCGGTAAATCATCAATAACCTGTTCTTCACGGTAATGACTTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggt                                                                                                              <  2:1641203/282‑1 (MQ=255)
                                                                                                                                                                  cggCCACTTCGGTAAATCATCAATAACCGTTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTAAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggtgc                                                                                                            <  2:899727/287‑2 (MQ=255)
                                                                                                                                                                      cACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggtgcga                                                                                                          <  2:753092/287‑4 (MQ=255)
                                                                                                                                                                            ggTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAAc                                                                                                   <  1:378171/288‑1 (MQ=255)
                                                                                                                                                                             gTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCaaa                                                                                                                                                                                 >  1:735046/1‑211 (MQ=255)
                                                                                                                                                                                   catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑Gcgcg                                                                                                                                            <  2:874108/240‑1 (MQ=255)
                                                                                                                                                                                   catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATaaa                                                                                           >  2:716974/1‑289 (MQ=255)
                                                                                                                                                                                     tcaatcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTgg                                                                                                                                                                                                                                               <  1:1384965/142‑1 (MQ=255)
                                                                                                                                                                                     tcaatcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATaaaa                                                                                          >  1:357255/1‑288 (MQ=255)
                                                                                                                                                                                     tcaatcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATaaaa                                                                                          >  1:1256636/1‑288 (MQ=255)
                                                                                                                                                                                        atcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATccc                                                                                                                                                               >  1:1133396/1‑218 (MQ=255)
                                                                                                                                                                                        atcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACaa                                                                                      >  1:412828/1‑289 (MQ=255)
                                                                                                                                                                                               gTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGcc                                                                               <  2:575332/289‑1 (MQ=255)
                                                                                                                                                                                               gTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCT‑AAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGccc                                                                              <  1:663286/289‑1 (MQ=255)
                                                                                                                                                                                               gTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTGCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGcc                                                                               <  2:610263/289‑1 (MQ=255)
                                                                                                                                                                                                ttcttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATATGCGCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCg                                                                                 >  1:1544809/1‑288 (MQ=255)
                                                                                                                                                                                                ttcttcGCGGTAATGACGGAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTACAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTACAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCAAACATAACGGACTAAAAACAAAATCGcc                                                                               >  2:1217808/1‑288 (MQ=255)
                                                                                                                                                                                                ttcttaCCGGTAATGACGTAAAAGGTTAATGACATAAAAAGTAACCAACGCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGccc                                                                              <  2:1599247/289‑1 (MQ=255)
                                                                                                                                                                                                   ttcgagagaaTGCCGTAAACGGTTAAAGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGt                                                                           <  2:470560/281‑1 (MQ=255)
                                                                                                                                                                                                     cgcgGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGtt                                                                          >  1:321105/1‑288 (MQ=255)
                                                                                                                                                                                                       cgGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCa                                                                       >  1:1324485/1‑289 (MQ=255)
                                                                                                                                                                                                        ggTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCa                                                                       <  2:601895/288‑1 (MQ=255)
                                                                                                                                                                                                             tGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAaca                                                                 <  2:893174/289‑1 (MQ=255)
                                                                                                                                                                                                              gACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAacac                                                                <  2:418401/289‑1 (MQ=255)
                                                                                                                                                                                                                   aaaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt                                                           <  2:1237231/289‑1 (MQ=255)
                                                                                                                                                                                                                   aaaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt                                                           <  1:1147896/289‑1 (MQ=255)
                                                                                                                                                                                                                    aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGCCAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAAAACGCGCtt                                                          >  1:440304/1‑289 (MQ=255)
                                                                                                                                                                                                                    aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggt                                                                                                              <  2:632282/237‑1 (MQ=255)
                                                                                                                                                                                                                    aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCtt                                                          >  1:1811764/1‑289 (MQ=255)
                                                                                                                                                                                                                     aCGGTTAATGACAGAAAAAGTAACCATCCCCACAACCTCTCCCAGCCCTGTTTCGCGAAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCTAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACTTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTa                                                         <  1:1621438/289‑1 (MQ=255)
                                                                                                                                                                                                                         ttAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTTATCCAAACGTTCAATAT‑‑GCACGTGGAACCAAACGCATAAAAACTTTACTGTTTCGAACTTAACGGAATAAAAACAAAACACCCCCGTTCAAGTAACAcgacctaacc                                                       >  2:1493059/1‑279 (MQ=255)
                                                                                                                                                                                                                           aaTGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACg                                                                                                                                                           >  1:872952/1‑187 (MQ=255)
                                                                                                                                                                                                                           aaTGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATAGCCCCGTTCCAGTAACACGCGCTTACCGTTa                                                   >  1:435318/1‑289 (MQ=255)
                                                                                                                                                                                                                                 aTAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAAtct                                               >  1:561977/1‑287 (MQ=255)
                                                                                                                                                                                                                                   aaaaaGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCg                                                                                 <  1:809150/251‑1 (MQ=255)
                                                                                                                                                                                                                                   aaaaaGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCg                                                                                 >  2:809150/1‑251 (MQ=255)
                                                                                                                                                                                                                                       aGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTTATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTAACCGTTAATCCCCTGTaaa                                       >  1:1893331/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCcaca                                                                                                                                                                                                                                                                     <  2:1051595/66‑1 (MQ=255)
                                                                                                                                                                                                                                           aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGcc                                                                               <  1:1528831/245‑1 (MQ=255)
                                                                                                                                                                                                                                           aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGcc                                                                               >  2:1528831/1‑245 (MQ=255)
                                                                                                                                                                                                                                           aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATaa                                    >  2:1694537/1‑288 (MQ=255)
                                                                                                                                                                                                                                           aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAAc                                   >  1:913190/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ataccaccaaACCCTTCCAGCCCTGTTTCGAGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:667902/282‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCTCAACCAACTCTTCCAACCCTGTTTAGCGGAAATTCAATGAAGAAATCACTGTTTCAACATAGGTGAGAAAAGCGTTATTGGGCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:959221/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  1:1227885/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  1:1474195/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:157787/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCTCAACAAACTCCTCCAGCTCTGTTTCGCGGAAATGCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:303839/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCCCAACCAACCCTTACAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:856329/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 tcAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                <  2:439426/286‑1 (MQ=255)
                                                                                                                                                                                                                                                  caacaaACTCTTCCAGCCCTGGTTCGCGGACAGTCACTGAAGAAATCACTGTTTCAACATAGGTGAAAAAAGCTGTATTGGCCCGGTAGACCTGAGAAG‑AACAAACGCAATAAGCCAATAATGGCAGGTAATGCTGCTCAAAAACGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGTAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGt                            <  2:1391440/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         ctctTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATAcc                     <  2:1330136/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           ctTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCACTAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTACTCTCCTGGAAATAACGCCCGGTCAATACCag                   >  1:187790/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              ccgtcccTGTTTGCCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACACTGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGt                <  2:1198685/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTaaa             <  2:1012594/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTaaa             <  1:169066/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cccTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAACTCGCCCCGTTCCAGTAACACGCGCATACCTTTAATCCCCTGGAAATAACGCCCGGTTAATACCAGAGAAAAt            >  2:1126163/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   ccggTTTCGCGGAAATTAAATGAAGAAATCACTGTTTCCACAAAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAAtt           <  2:1666728/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTc          >  1:695542/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    cTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTc          >  1:1675599/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           gcgGAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAg   <  1:1926965/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ggAAATTCAATGAAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt  <  1:1740673/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ggAAATTCAATGAAGAAATCACTGTTTCCACATAAGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGAACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt  <  2:544781/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
ATTAATACGGATTTCATTAATAATCTGCATTGGCGTTTTGCCATAATATCGTTGAGTCGCTCGCGTCAAATATTCCTGACTTTTGGCACTCAACGCCACCATATTCTCCAGCGCGCTTTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAAACTAGAAATCACTGTTTCCACATAGGTGAGAAAAGCGTTATTGGTCCGGTATACCTGGCTAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGGCTACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGT  >  CP042583/1500715‑1501271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A