Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,501,051 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,501,0510GC99.3% 691.5 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (138/156);  minor base A (0/2);  total (138/159)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,501,0520CG99.3% 696.3 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (137/157);  minor base T (1/1);  total (138/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,501,0530TA100.0% 708.1 / NA 297intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (138/159);  total (138/159)

Only 100 of 297 total aligned reads displayed.

GCTCGCGTCAAATATTCCTGACTTTTGGCACTCAACGCCACCATATTCTCCAGCGCGCTTTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAAACTAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGGCTAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGGCT‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGTTTTGTTATAGATAAACACATGGAAG  >  CP042583/1500773‑1501327
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
gctcgcGTCAAATATTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACaa                                                                                                                                                                                                                                                                                <  1:1318694/289‑1 (MQ=255)
             atTCCTGTGATTTGGCTGACAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGcaa                                                                                                                                                                                                                                                                  <  2:787650/289‑1 (MQ=255)
                  tgtgatttggctgacAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                                                                             <  1:363360/275‑1 (MQ=255)
                  tgtgatttggctgacAACGCCACCATATTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                                                                             <  1:139877/275‑1 (MQ=255)
                  tgcaatttgcctaacAACGCCACCATTTTCTCCACCGCCGATTCCCTAAACTGCTCTTTATCAGGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCCCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATg                                                                                                                                                                                                                                                             <  2:896156/275‑1 (MQ=255)
                                           tatTCTCCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCg                                                                                                                                                                                                                                    >  2:694030/1‑289 (MQ=255)
                                           tatTCTCCAGCGACGTTTCCCTAAACTGCTCTTTATCATGCATCTTTTCTCCCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGc                                                                                                                                                                                                                                     <  2:359634/288‑1 (MQ=255)
                                              tctcCAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGttt                                                                                                                                                                                                                                 >  2:1232844/1‑289 (MQ=255)
                                                 ccAGCGCCGATTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACt                                                                                                                                                                                                                              <  1:1429763/289‑1 (MQ=255)
                                                     cgccgattCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGAt                                                                                                                                                                                                                           >  1:1012594/7‑288 (MQ=255)
                                                     cgccgattCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGAt                                                                                                                                                                                                                           >  1:1070976/7‑288 (MQ=255)
                                                      gccgattCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATcc                                                                                                                                                                                                                         <  1:26958/284‑1 (MQ=255)
                                                          attCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAAc                                                                                                                                                                                                                     >  1:897842/2‑289 (MQ=255)
                                                            tCACTAAACTGCACTTTTTCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGGTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGt                                                                                                                                                                                                                   <  1:1604420/289‑1 (MQ=255)
                                                               cTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCa                                                                                                                                                                                                                >  1:439426/1‑289 (MQ=255)
                                                                               gcttcATCTTTTCTACCGTACTGTTCAGCCACTGGTGGACATAATAAATCACCTGTTCATCGCCGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCAACTCAACCTACGCCTCCAGCCCGGTTTCACGAAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAG‑AAAGCGTTATTGGTCCGGTATCCCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCAAACGTTCAATAT‑‑GCGCGTGGCACCa                                                                                                                                                                                             <  2:1295520/285‑1 (MQ=255)
                                                                                         ttCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATaa                                                                                                                                                                                    <  2:402899/289‑1 (MQ=255)
                                                                                          tCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATaaa                                                                                                                                                                                   <  2:1481056/289‑1 (MQ=255)
                                                                                          tCTACCGTACTTTGCCGCCACTACGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATaaa                                                                                                                                                                                   <  2:1534296/289‑1 (MQ=255)
                                                                                                gTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAAt                                                                                                                                                                                                                                                                         <  1:551916/199‑1 (MQ=255)
                                                                                                gTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACttt                                                                                                                                                                             >  2:1362100/1‑289 (MQ=255)
                                                                                                gTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACttt                                                                                                                                                                             >  1:575332/1‑289 (MQ=255)
                                                                                                 tACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTg                                                                                                                                                                            >  1:751243/1‑289 (MQ=255)
                                                                                                      ttCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggt                                                                                                                                                                       >  1:1018665/1‑289 (MQ=255)
                                                                                                           ccACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAACAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGCGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggtgcgaa                                                                                                                                                                  >  2:1627539/1‑285 (MQ=255)
                                                                                                           ccACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGAtggtgcga                                                                                                                                                                   >  1:418504/1‑285 (MQ=255)
                                                                                                                   gTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCaaa                                                                                                                                                                                                                                          <  2:735046/211‑1 (MQ=255)
                                                                                                                         catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑Gcgcg                                                                                                                                                                                                     <  2:874108/240‑1 (MQ=255)
                                                                                                                         catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑Gcgcg                                                                                                                                                                                                     >  1:874108/1‑240 (MQ=255)
                                                                                                                         catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATaaa                                                                                                                                                   >  2:716974/1‑289 (MQ=255)
                                                                                                                         catcaATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGAAACAATGGCAGGTACTGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGGGGCACCAAACCCATAAAAACTTTGATGGTGCTA‑ACCTAACGGAATaaa                                                                                                                                                   >  2:1880580/1‑289 (MQ=255)
                                                                                                                           tcaatcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATaaaa                                                                                                                                                  >  1:1256636/1‑288 (MQ=255)
                                                                                                                              atcaCCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATccc                                                                                                                                                                                                                        <  2:1133396/218‑1 (MQ=255)
                                                                                                                                     gTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGcc                                                                                                                                       <  2:575332/289‑1 (MQ=255)
                                                                                                                                     gTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTGCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGcc                                                                                                                                       <  2:610263/289‑1 (MQ=255)
                                                                                                                                      ttcttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATATGCGCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCg                                                                                                                                         >  1:1544809/1‑288 (MQ=255)
                                                                                                                                      ttcttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      <  1:73067/289‑1 (MQ=255)
                                                                                                                                      ttcttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      <  2:1704528/289‑1 (MQ=255)
                                                                                                                                      ttcttaCCGGTAATGACGTAAAAGGTTAATGACATAAAAAGTAACCAACGCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      <  2:1599247/289‑1 (MQ=255)
                                                                                                                                       tcttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      >  2:481626/1‑288 (MQ=255)
                                                                                                                                         ttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGt                                                                                                                                   >  1:495749/1‑289 (MQ=255)
                                                                                                                                         ttcGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGt                                                                                                                                   <  2:1013271/289‑1 (MQ=255)
                                                                                                                                           cgcgGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTAAACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTGACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTGTATGGTGCGA‑ACCTAACGGAGTAACAAACAAATCTCCCCGtt                                                                                                                                  >  2:642251/1‑288 (MQ=255)
                                                                                                                                              ggTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCa                                                                                                                               <  2:601895/288‑1 (MQ=255)
                                                                                                                                                    gACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAacac                                                                                                                        <  2:418401/289‑1 (MQ=255)
                                                                                                                                                        tAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACAcgc                                                                                                                      >  2:667001/1‑287 (MQ=255)
                                                                                                                                                          aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATgctgct                                                                                                                                                                                                                                              <  1:1914253/168‑1 (MQ=255)
                                                                                                                                                          aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATgctgct                                                                                                                                                                                                                                              >  2:1914253/1‑168 (MQ=255)
                                                                                                                                                          aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑Gcgcg                                                                                                                                                                                                     <  1:40536/207‑1 (MQ=255)
                                                                                                                                                          aaCGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCtt                                                                                                                  >  1:1811764/1‑289 (MQ=255)
                                                                                                                                                               ttAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACAcg                                                                                                                       <  1:81281/279‑1 (MQ=255)
                                                                                                                                                                   tGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAAt                                                                                                         <  2:1660325/289‑1 (MQ=255)
                                                                                                                                                                         aaaaaGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATccc                                                                                                                                                                                                                        <  1:991018/175‑1 (MQ=255)
                                                                                                                                                                         aaaaaGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTg                                                                                                   >  2:315474/1‑289 (MQ=255)
                                                                                                                                                                          aaaaGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTgg                                                                                                  <  1:470859/289‑1 (MQ=255)
                                                                                                                                                                                 aCCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGcc                                                                                                                                       <  1:1528831/245‑1 (MQ=255)
                                                                                                                                                                                    aTCTCAACCAACTCTTCCAACCCTGTTTAGCGGAAATTCAATGAAGAAATCACTGTTTCAACATA‑GGTGAGAAAAGCGTTATTGGGCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  2:959221/289‑1 (MQ=255)
                                                                                                                                                                                    aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  2:1438071/289‑1 (MQ=255)
                                                                                                                                                                                    aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  2:157787/289‑1 (MQ=255)
                                                                                                                                                                                    aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  1:1474195/289‑1 (MQ=255)
                                                                                                                                                                                    aTCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  1:1227885/289‑1 (MQ=255)
                                                                                                                                                                                    aTCCCAACCAACCCTTACAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  2:856329/289‑1 (MQ=255)
                                                                                                                                                                                     tctcAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGccc                                                                                       >  1:113986/1‑289 (MQ=255)
                                                                                                                                                                                      ctcAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCACCGTTCCAGTAACACGCGCTTCCCGTTAATCTCATGCAACAAACGCCCg                                                                                      >  2:1844445/1‑289 (MQ=255)
                                                                                                                                                                                       tcAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGcc                                                                                        <  2:439426/286‑1 (MQ=255)
                                                                                                                                                                                       tcAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCgg                                                                                     >  2:1100265/1‑289 (MQ=255)
                                                                                                                                                                                        caacaaACTCTTCCAGCCCTGGTTCGCGGACAGTCACTGAAGAAATCACTGTTTCAACATA‑GGTGAAAAAAGCTGTATTGGCCCGGTAGACCTGAGAAG‑AACAAACGCAATAAGCCAATAATGGCAGGTAATGCTGCTCAAAAACGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGTAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGt                                                                                    <  2:1391440/289‑1 (MQ=255)
                                                                                                                                                                                           caaACTCTTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCCCTTACCGTTAAACACCCGGAAATAACGCCCGGttta                                                                                 >  2:1145930/1‑287 (MQ=255)
                                                                                                                                                                                               ctctTCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATAcc                                                                             <  1:341383/289‑1 (MQ=255)
                                                                                                                                                                                                   tCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCagag                                                                         >  1:1650678/1‑289 (MQ=255)
                                                                                                                                                                                                   tCCAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAAGCGCACCGTTCCAGTAACACGAGCTTACCGTTAATCCCCTGGAAATCACGCCCGGTCaaacacagag                                                                         >  2:151463/1‑281 (MQ=255)
                                                                                                                                                                                                    ccAGCCCTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGt                                                                        <  2:1070976/289‑1 (MQ=255)
                                                                                                                                                                                                         catGTTTCGCGGAAATTCATTGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTaaa                                                                     <  1:950128/285‑1 (MQ=255)
                                                                                                                                                                                                          cTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTc                                                                  >  1:695542/1‑289 (MQ=255)
                                                                                                                                                                                                          cTGTTTCGCGGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTc                                                                  >  1:1675599/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgGAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAg                                                           >  1:20932/1‑288 (MQ=255)
                                                                                                                                                                                                                   ggAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt                                                          <  1:1740673/288‑1 (MQ=255)
                                                                                                                                                                                                                   ggAAATTCAATGAAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt                                                          <  2:546422/288‑1 (MQ=255)
                                                                                                                                                                                                                   ggAAATTAAATGAAGAAATGACTGTTTCCAGATA‑GGTGAGAAAAGGGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt                                                          <  2:1205184/288‑1 (MQ=255)
                                                                                                                                                                                                                   gaaaattcaataaggAAATCACTGGTGCCACAAA‑TGTATGAAAAGCGTTTTTGGTCCGGTATAACTTCGAAGAGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCTCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAGTCGCCCCGTTCCAGTAACACGCGCTTACCGTTAAGCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGt                                                          <  2:1675720/274‑1 (MQ=255)
                                                                                                                                                                                                                          taagtaaaaaaTCACCGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTTCGGTATACCTTGGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGa                                                  <  1:1029081/281‑1 (MQ=255)
                                                                                                                                                                                                                                   aataccattttCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAACCAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTc                                           <  2:432659/279‑1 (MQ=255)
                                                                                                                                                                                                                                           tttCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCTTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTTATAc                                  >  2:1333544/1‑288 (MQ=255)
                                                                                                                                                                                                                                            ttCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACCCGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTTATGCAGTCCGCTGATAc                                  >  2:270814/1‑287 (MQ=255)
                                                                                                                                                                                                                                             tcagagtA‑GGTGAGAAAAGATTTAGTGGTCCTGTATACGTGCCAGGCGACAAA‑GCATTAAGGAGACCAGGGCGGGTAATACTGCTCAAAAACGCGTGTTCTGATCCCAAGGTGCAATAT‑‑AGGCGTGGGACCAAACTTATAACAACTTTGCTGG‑GGCTCACCTAACGGAATAAACACAAAATCGCCCCGTTCCAGGAACACCCGGATACCGTTACTCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGGGGCAGTCCGCTGATActct                               <  2:263049/283‑1 (MQ=255)
                                                                                                                                                                                                                                             tCCACATAGGGTGA‑AAAAGCGTTATTGGTCCGGTATACCGGCGAAGCAAAAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGGTCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATActct                               <  2:1767216/289‑1 (MQ=255)
                                                                                                                                                                                                                                             tCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAAc                                                                                                                                                           <  2:229026/165‑1 (MQ=255)
                                                                                                                                                                                                                                             tCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATActct                               <  1:667001/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 caTA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGt                           <  1:1882210/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aTA‑GGTGAGAAGAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATCATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGtt                          <  1:1126750/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aTA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGtt                          <  1:1694537/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aTA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGtt                          <  1:662406/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      ggTGAGAAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGc                                               >  1:712699/1‑265 (MQ=255)
                                                                                                                                                                                                                                                         gagaAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGTTTTGTta                    <  1:309711/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          agaAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTAAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGTTTTGTta                    <  1:1195568/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           gaAAAGCGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCt                                                                                                                   >  1:1862035/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                 cGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      <  1:12478/167‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cGTTATTGGTCCGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGccc                                                                                                                                      >  2:12478/1‑167 (MQ=255)
                                                                                                                                                                                                                                                                           ccGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGca                                                                                        >  1:1339682/1‑202 (MQ=255)
                                                                                                                                                                                                                                                                           ccGGTATACCTGCGAAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGCGA‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCATGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTTCTGATGCAGTCCGCTGATACTCTCAGTTTTGTTATAGATAAACACATGGaat  >  2:913202/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
GCTCGCGTCAAATATTCCTGACTTTTGGCACTCAACGCCACCATATTCTCCAGCGCGCTTTCACTAAACTGCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACCTGTTCTTCGCGGTAATGACGTAAACGGTTAATGACATAAAAAGTAACCATCTCAACAAACTCTTCCAGCCCTGTTTCGCGGAAATTCAAACTAGAAATCACTGTTTCCACATA‑GGTGAGAAAAGCGTTATTGGTCCGGTATACCTGGCTAGCGACAAA‑GCAATAAGGCAACAATGGCAGGTAATGCTGCTCAAAAAAGCGTTTACTGATCCCAACGTTCAATAT‑‑GCGCGTGGCACCAAACTCATAAAAACTTTGATGGTGGCT‑ACCTAACGGAATAAAAACAAAATCGCCCCGTTCCAGTAACACGCGCTTACCGTTAATCTCCTGGAAATAACGCCCGGTTAATACCAGAGTAAATTCATAATAGTCGTGCTGATGCAGTCCGCTGATACTCTCAGTTTTGTTATAGATAAACACATGGAAG  >  CP042583/1500773‑1501327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A