Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,502,482 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,502,4820GC99.1% 522.2 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (100/127);  total (103/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,502,4830CG99.1% 534.3 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (102/126);  minor base A (1/1);  total (103/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,502,4840TA99.6% 541.6 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (102/128);  total (103/128)
Fisher's exact test for biased strand distribution p-value = 4.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 232 total aligned reads displayed.

AGAGGCGATAAAGATAGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AAGCTTGCCAGTGGGGTACTGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCGCTGAAGGAACGGCTTACACTAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGCCTCACCG  >  CP042583/1502203‑1502767
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                           
agagGCGATAAAGATAGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAg                                                                                                                                                                                                                                                                                       <  1:516047/288‑1 (MQ=255)
 ggggggATCAAGAAAGCCAGGAGCAGGCCTAAAGTCGAACCACGGCCCCCAAGGAAAATAAAGGAGGCCAGCATCGGCTTGGCCAAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTGCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGt                                                                                                                                                                                                                                                                                      <  2:1025283/283‑1 (MQ=255)
 gagGCGATAAAGATAGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGt                                                                                                                                                                                                                                                                                      <  1:572950/288‑1 (MQ=255)
      cgtAAAGAAAGCCAGGATCAGGCCTAAAGGCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCGTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGtt                                                                                                                                                                                                                                                                                <  2:1444584/287‑2 (MQ=255)
        tAAAGGTAGACGGGATCAGGCCAAAAGTCCCACCGCGGCCCCCAAGGAAAATAAAGGCGTCCAGCATCGGCTTGCCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGttg                                                                                                                                                                                                                                                                               <  2:1701034/288‑3 (MQ=255)
          aaGATAGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGttgaga                                                                                                                                                                                                                                                                            <  2:1056200/289‑6 (MQ=255)
           aGATAGGCAGGATCAGGCCTAAAGTCGAACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGttgagat                                                                                                                                                                                                                                                                           <  1:34013/289‑7 (MQ=255)
               aGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTa                                                                                                                                                                                                                                                                       >  1:1265159/1‑289 (MQ=255)
                  cAGGATCAGGCCTAAAGTCGCACCACTGCCCCTAAGGAAAATAAAGGAGTCCATCATCGGCTTGGCCCAGTTATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTAt                                                                                                                                                                                                                                                                      <  1:1122175/287‑1 (MQ=255)
                  cAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTAt                                                                                                                                                                                                                                                                      <  1:1627062/287‑1 (MQ=255)
                       tCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATaa                                                                                                                                                                                                                                                                <  1:774701/288‑1 (MQ=255)
                       cagggCCTAAATTCGCCACCCTGCCCCAAAGGAAAATAAAGGAGTCCGGACTCGGCTTGGCCCAGATATGGAAGGTCTGACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATaa                                                                                                                                                                                                                                                                <  2:259345/285‑1 (MQ=255)
                                     gCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGt                                                                                                                                                                                                                                                 >  1:1437923/1‑289 (MQ=255)
                                      caccacTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACCTAGGCCCAGCCCACCACGCTCACC‑AACGATGCCAGTGTGGTTGAGATGTTATCCAAAATGATCTGATgtgagtc                                                                                                                                                                                                                                                >  2:1930621/1‑283 (MQ=255)
                                           cTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGc                                                                                                                                                                                                                                           <  1:1582838/289‑1 (MQ=255)
                                            tGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGAGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGACCAGCCCACCACGCTACCC‑AAAGATGCCAGTGGGGTTGAGCTGGTATCCATAATGAACTGATGGACGTTGGTGc                                                                                                                                                                                                                                           >  2:456526/1‑288 (MQ=255)
                                             gCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGccc                                                                                                                                                                                                                                         <  2:229322/289‑1 (MQ=255)
                                              cccccAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGccc                                                                                                                                                                                                                                         <  2:476836/288‑1 (MQ=255)
                                               ccccAAGGAAAATAAAGGGGTGCAGAATCGGCTTGGCCCAGATATGGAAGGGCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGcccc                                                                                                                                                                                                                                        <  2:1367275/288‑1 (MQ=255)
                                                cccAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AGCGATGCCAGTGGGGTTGAGATGGTATCCATAATGAGCTGATGGAAGTTGGTGCCCCAg                                                                                                                                                                                                                                      <  2:108068/289‑1 (MQ=255)
                                                           tAAAGGAGACCAGCAGCGTCTTGGCCCAGATATGGAGGGTCCTCCCAGCGGCCTGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGTCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGTGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGc                                                                                                                                                                                                                           <  2:584626/289‑1 (MQ=255)
                                                             acggAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGGAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGccc                                                                                                                                                                                                                         <  1:965629/287‑1 (MQ=255)
                                                                gAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAg                                                                                                                                                                                                                       >  2:1462064/1‑288 (MQ=255)
                                                                   tCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCaa                                                                                                                                                                                                                   >  2:1320594/1‑289 (MQ=255)
                                                                   tCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCaa                                                                                                                                                                                                                   >  2:1690628/1‑289 (MQ=255)
                                                                   tCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGCTGAGATGGTATCCATAATGATCGGACGGAAGTTGGTGCCCCAGGTATTCAACGCCACGGCaa                                                                                                                                                                                                                   >  2:366185/1‑289 (MQ=255)
                                                                   tCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTGTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGGGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCCAAAGAATG‑CAGTGGGGTTGAGATGGTATCCAAAATGATCTGATGGACGCTGGTGCCCCAGGTAGTCAAAGccccaggta                                                                                                                                                                                                                   >  2:1748932/1‑283 (MQ=255)
                                                                    ccAGCATCGGCTTGGCCCAGATATGGAATGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCa                                                                                                                                                                                                                    <  1:1392724/287‑1 (MQ=255)
                                                                             gCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATcccaa                                                                                                                                                                                                          >  1:1032439/1‑286 (MQ=255)
                                                                                 ggaccagtgatGGAAGGTCTTACCGGGTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGTTAATTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACg                                                                                                                                                                                                     <  2:749682/280‑1 (MQ=255)
                                                                                   cccAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGa                                                                                                                                                                                                   <  1:1904094/289‑1 (MQ=255)
                                                                                   cccAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGa                                                                                                                                                                                                   >  1:1463543/1‑289 (MQ=255)
                                                                                            ggAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAAGCCCCAGGCAATAATCCCCATCACGGAAAGaataat                                                                                                                                                                                          >  1:1876300/1‑289 (MQ=255)
                                                                                             gAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAataata                                                                                                                                                                                         >  1:622958/1‑289 (MQ=255)
                                                                                                   ctaaCCGGCTGCCAGCGCCGCTTCGACGGATCCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCATCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATTATCCCCATCACTGAAAGAATAATAAAGCCg                                                                                                                                                                                   <  1:1748932/286‑1 (MQ=255)
                                                                                                               cagggcacgttggACGGAACCATATTGCTGTTAGGTCGGGATATTTTCCAGTGCCAACGGCGTCATACTGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATgcc                                                                                                                                                                       <  2:1741653/277‑2 (MQ=255)
                                                                                                                     cgcTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATgccgagaag                                                                                                                                                                 <  1:1369349/289‑8 (MQ=255)
                                                                                                                        ttCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGAACTGATGGAAGGTGGTGCCCCAGGGATTAAACGCCAAAGCAATAAATCCTATCACGGAAGAAAAAATAAAGACGGGAGTTAATacgtgaaagga                                                                                                                                                               >  2:1595753/1‑280 (MQ=255)
                                                                                                                                aaCCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACgcgata                                                                                                                                                       <  1:690846/288‑6 (MQ=255)
                                                                                                                                             aTAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTAc                                                                                                                                          >  1:1041418/1‑288 (MQ=255)
                                                                                                                                               aGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACg                                                                                                                                                            >  1:1673777/1‑268 (MQ=255)
                                                                                                                                               aGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACg                                                                                                                                                            <  2:1673777/268‑1 (MQ=255)
                                                                                                                                                    gcgATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCgg                                                                                                                                  >  1:689588/1‑289 (MQ=255)
                                                                                                                                                    gcgATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCgg                                                                                                                                  >  1:1181861/1‑289 (MQ=255)
                                                                                                                                                    gcgATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCgg                                                                                                                                  >  1:1593788/1‑289 (MQ=255)
                                                                                                                                                      gATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCggg                                                                                                                                 <  1:1690628/288‑1 (MQ=255)
                                                                                                                                                      gATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGc                                                                                                                                <  1:83715/289‑1 (MQ=255)
                                                                                                                                                      gATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGc                                                                                                                                <  1:236281/289‑1 (MQ=255)
                                                                                                                                                                  tGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGACTTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGACGTTGAATGAc                                                                                                                     >  2:1280585/1‑288 (MQ=255)
                                                                                                                                                                  tGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGAc                                                                                                                     >  1:1835532/1‑288 (MQ=255)
                                                                                                                                                                  tGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGAc                                                                                                                     >  1:1055695/1‑288 (MQ=255)
                                                                                                                                                                  tGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGAAACTGAAGAAGGGACGCTGTCGGGCAGTTTAATGAc                                                                                                                     >  2:402121/1‑288 (MQ=255)
                                                                                                                                                                  tGCACACGGAGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCAATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACAC‑AACGATGCCAGTGGGGAAGAGATGGTATGCATAATGATCTGATGGTAGGTGGTGCCCCAGGTATTCAACGCTCAGGCAATAATCCCCCTCACGGGAAGAATAACAAAGCCGGGAATGAACGCATAGAAGGAAGTCGATAAAGTAGCACGTACATGGTCGGGCAGTCTaacgga                                                                                                                     >  2:683655/1‑284 (MQ=255)
                                                                                                                                                                    cccACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCa                                                                                                                  >  1:1508585/1‑289 (MQ=255)
                                                                                                                                                                           gggcagaaTGCGGTTGTCCAGTGCGGGCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcg                                                                                                            <  2:111709/282‑1 (MQ=255)
                                                                                                                                                                           gcgactgaTGCCGTGGTCCAGTGCGATGAGCGCCAGCGCGGCATGAATACCGAAGAAGCAGAGCAGTGGAACAAAGATCACATCGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGTTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcg                                                                                                            <  2:1044041/281‑1 (MQ=255)
                                                                                                                                                                              catcatGGCGTTGTCCAGTGCTGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcggcg                                                                                                         <  1:1068256/288‑1 (MQ=255)
                                                                                                                                                                                     ccGGTGTCCAGGTCGGTCAGCGGCAGCGCGCCATGAAGACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTATCC‑AACGATGCCAGTGGGGTTGGAATGGTAGCCATGATGATCTGATGGAAGTTGGTGCCACAGGTATTCAACGCCCAGGCAATAATCCCCATAGCGGAAAGAATAATAGAGGCGGGAAGTAATGCCGATAGGGAACGGGATACTGAAGCAGGTACGGTGTCGTGGAGTTTAATGACCCAATTGCGGGGGACAATa                                                                                                  <  2:216310/288‑1 (MQ=255)
                                                                                                                                                                                       gTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCg                                                                                                                                                                                   <  2:1767931/205‑1 (MQ=255)
                                                                                                                                                                                       gTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCg                                                                                                                                                                                   >  1:1767931/1‑205 (MQ=255)
                                                                                                                                                                                        ttGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAgg                                                                                              >  1:1871138/1‑289 (MQ=255)
                                                                                                                                                                                        ttGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAgg                                                                                              >  1:956447/1‑289 (MQ=255)
                                                                                                                                                                                        ttGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAgg                                                                                              >  2:1889361/1‑289 (MQ=255)
                                                                                                                                                                                             cAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAAc                                                                                         >  2:195709/1‑289 (MQ=255)
                                                                                                                                                                                                 gCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACAtt                                                                                      <  1:296686/288‑1 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGACTAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTAACCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAACGTAAACATTTCTg                                                                                  >  2:1161566/1‑288 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACgcg                                                                                                                                                          <  1:914437/216‑3 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACgcg                                                                                                                                                          >  2:914437/1‑214 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcggcg                                                                                                         <  2:1573346/265‑1 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcggcg                                                                                                         >  1:1573346/1‑265 (MQ=255)
                                                                                                                                                                                                     tCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTcgg                                                                                  >  2:940567/1‑286 (MQ=255)
                                                                                                                                                                                                      cagcgccagctcGCCATGACTACCTAAGAACCAGAGCAGTGGAACAAAGAGCACATAGGCCCAGCCCACCACGCTACCC‑AACTATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGGAGTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGc                                                                                 <  2:1245156/288‑1 (MQ=255)
                                                                                                                                                                                                      cagcgccagcgcGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGc                                                                                 <  1:227030/288‑1 (MQ=255)
                                                                                                                                                                                                      cagcgccagcgcGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGc                                                                                 <  2:1585171/288‑1 (MQ=255)
                                                                                                                                                                                                            ccacgcgcCAAGACTACCGAAGAACCCGAGCAGTGGAACAAAGATCACCTAGGCCCAACCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGccaccac                                                                           <  2:1916478/285‑1 (MQ=255)
                                                                                                                                                                                                            cagcgcGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCTGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGccaccacc                                                                          <  1:1191372/289‑1 (MQ=255)
                                                                                                                                                                                                            cagcgcGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGccaccacc                                                                          <  1:456526/289‑1 (MQ=255)
                                                                                                                                                                                                                   ccATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATACGCCCAGCCCACCACGCTACCC‑AACGACGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCGATTGCGGCGGCAAAGAAAGGTAAAAACTTCTGCCAACACCCGGCaaa                                                                   >  2:1198207/1‑289 (MQ=255)
                                                                                                                                                                                                                              gaagaaCCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCg                                                        >  1:26608/1‑289 (MQ=255)
                                                                                                                                                                                                                                  aaCCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGgaga                                                    >  2:319222/1‑289 (MQ=255)
                                                                                                                                                                                                                                   aCCAGAGCAGGGGAACAAAGATGAAATAGGACCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGGGCCCAAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAgat                                                   <  2:1871138/289‑1 (MQ=255)
                                                                                                                                                                                                                                           aGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATAtt                                             <  1:701646/287‑1 (MQ=255)
                                                                                                                                                                                                                                              ggAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AGCGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGc                                          <  1:1280585/287‑1 (MQ=255)
                                                                                                                                                                                                                                               gAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGcccc                                       >  1:1318305/1‑289 (MQ=255)
                                                                                                                                                                                                                                               gAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGccc                                        <  1:1708364/288‑1 (MQ=255)
                                                                                                                                                                                                                                               gAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGccc                                        >  2:856116/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     aGATCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATAtt                                             <  1:1754025/277‑1 (MQ=255)
                                                                                                                                                                                                                                                       aTCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTgcggcg                                                                                                         >  1:1953762/1‑215 (MQ=255)
                                                                                                                                                                                                                                                       aTCACATAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACCTTTCGGCCACCACCAGGCCAATAAGAAGCCCGGAAACGATATTACCCCCACCTAAcc                               >  2:1842922/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          acaTAGGCCCAGCCCACCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGt                            >  2:623178/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                gcccagcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGa                                                                                                                      >  2:790926/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                gcccagcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGa                                                                                                                      <  1:790926/193‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccagcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCAcc                     <  1:435508/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    agcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAAATGGTATCCATAATGATCTGATGGAAGTTGGTGACCCAGGTATTCAACGCCACGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTG‑‑‑CCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGc               <  2:1483642/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTTCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAAc                  >  2:57360/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gcccaCCACGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAAc                  >  2:1419945/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          ccacGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATa            >  1:560929/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          ccacGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATa            >  2:1813141/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          ccacGCTACCC‑AACGATGCCAGTGGGGTTGAGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATa            >  2:1182445/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cGCTACCC‑AAGGATGGCAGGTGGGTTGGGAGGTAATCCATAATGATCTGATTGAATTTGGTGCCGCAGGAAATCAAGGCCCAGGGAATAAACTCCATCACGGAAAGAATAATAAAGCCGCGAAAGAATGCCGAGAAGGAACGCGATACTGAAGCAGGTACGCTGTCGGGCAGTTTCATGACCCAATTGCGGCAGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGc         <  2:1032439/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                           
AGAGGCGATAAAGATAGCCAGGATCAGGCCTAAAGTCGCACCACTGCCCCCAAGGAAAATAAAGGAGTCCAGCATCGGCTTGGCCCAGATATGGAAGGTCTTACCGGCTGCCAGCGCCGCTTCGACGGAACCATATTGCTGATAGGTCGCGATATTTTCCAGTGCCCACGGCGTCATAATGCCGTTGTCCAGTGCGGTCAGCGCCAGCGCGCCATGAATACCGAAGAACCAGAGCAGTGGAACAAAGATCACATAGGCCCAGCCCACCACGCTACCC‑AAGCTTGCCAGTGGGGTACTGATGGTATCCATAATGATCTGATGGAAGTTGGTGCCCCAGGTATTCAACGCCCAGGCAATAATCCCCATCACGGAAAGAATAATAAAGCCGGGAATTAATGCGCTGAAGGAACGGCTTACACTAGCAGGTACGCTGTCGGGCAGTTTAATGACCCAATTGCGGCGGACAATAAAGGTAAACATTTCTGCCACCACCAGGCCAATAATAATCCCGGAGATGATATTCGCCCCACCTAACCAGTTTGCACCAACCGCATAGGCCTCACCG  >  CP042583/1502203‑1502767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A