Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,541,164 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,541,1640GC99.6% 620.0 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (104/161);  total (104/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,541,1650CG99.2% 619.8 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (103/161);  total (104/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,541,1660TA99.6% 622.3 / NA 267intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (102/163);  minor base G (1/0);  total (104/163)
Fisher's exact test for biased strand distribution p-value = 3.87e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 267 total aligned reads displayed.

TTTCATTTTGAATCCACCCGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATACTAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCGCTGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGACTATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATGCTGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAACCAGTTAATTAGTGTGTA  >  CP042583/1540884‑1541445
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                         
 ttCATTTTGAATCCACCCGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTTCCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAg                                                                                                                                                                                                                                                                                    <  1:175702/289‑1 (MQ=255)
   cATTTTGAATCCACCCGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑Ca                                                                                                                                                                                                                                                                                 <  2:1727673/289‑1 (MQ=255)
            tCCACCCGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATAACCTGCCGCGGCATAG‑CAAATGTAcct                                                                                                                                                                                                                                                                        >  2:179915/1‑287 (MQ=255)
                 ccGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGa                                                                                                                                                                                                                                                                  <  1:1767050/289‑1 (MQ=255)
                        atttattGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGt                                                                                                                                                                                                                                                           <  1:538031/289‑1 (MQ=255)
                           tattGGGTACTGCATAAATACTTAAACTATAAACGGAGACA‑CCGTTGGTTTCTGTTCCACTGGTGGCGATAGCAATTGCGAAAATAATTGACACCGCCCCCATAAGAATAAAGTCTCCCGTAACCCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGGTTGGCCTGTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGTATAG‑CAAACGTACATAT‑AGACGAAAGTAAt                                                                                                                                                                                                                                                        <  2:1909600/289‑1 (MQ=255)
                            attGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATc                                                                                                                                                                                                                                                       <  1:432037/289‑1 (MQ=255)
                            attGGCTACTACATCAAACCTGAAACTTTAGACGAGAACA‑CATTTAGTTTCGCTTCCAATGGTGGAGTGAGCAATTGCAACCATAATTGAAACAGCCCCCAGAAGAATAAAGACTCCCGTAACGCCCTAACTAATGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATc                                                                                                                                                                                                                                                       <  2:32793/289‑1 (MQ=255)
                              tGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑Ca                                                                                                                                                                                                                                                                                 >  2:175996/1‑262 (MQ=255)
                              tGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAg                                                                                                                                                                                                                                                     >  1:646598/1‑289 (MQ=255)
                                gCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGga                                                                                                                                                                                                                                                   >  2:1069226/1‑289 (MQ=255)
                                   aCTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGgaaga                                                                                                                                                                                                                                                >  2:706597/1‑289 (MQ=255)
                                   aCTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATAAACTGCCGAGGCATAG‑CCAACGTACAAAT‑CGAAGAAAATAAACAGgaaga                                                                                                                                                                                                                                                >  2:477053/1‑289 (MQ=255)
                                   aCTGCATCAATACTTAAACTTTCAACGGAGAAA‑CCTTTGGTTTCGATTCCAATGGTGGCCATAGCAATAGCGACAATAATTGAAACCGCCCACAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCAATGATTCG‑CCTAACGGATTGGCAAGACAAGTGCCACGGTCTTTGGGCCTTGTCTGCCAGATTTCTGGGAAATACACTGCCGGGGGATAGTCAAAC‑TTCATAT‑AGAACAAAGTacacgacgaaac                                                                                                                                                                                                                                               >  2:736374/1‑278 (MQ=255)
                                     tGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGaaa                                                                                                                                                                                                                                              <  1:453875/289‑1 (MQ=255)
                                       cATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCG‑CCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGa                                                                                                                                                                                                                                                               <  1:1052104/269‑1 (MQ=255)
                                          cAATAATTAAACTTTCAACGG‑GACACCCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAAt                                                                                                                                                                                                                                         <  2:1091543/289‑1 (MQ=255)
                                           aaTACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CCAACGTACATAT‑AGACGAAAGTAATCAGGACGAAACCaagc                                                                                                                                                                                                                                        >  2:1136110/1‑287 (MQ=255)
                                            aTACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACCATAATTGAAACCGCCCCCAGAAAAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCa                                                                                                                                                                                                                                       <  2:39520/289‑1 (MQ=255)
                                               cTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACg                                                                                                                                                                                                                                    >  1:1209998/1‑289 (MQ=255)
                                               cTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACg                                                                                                                                                                                                                                    >  2:816264/1‑289 (MQ=255)
                                                   aaCTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTAt                                                                                                                                                                                                                                <  1:740088/289‑1 (MQ=255)
                                                   aaCTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTAt                                                                                                                                                                                                                                <  1:1666380/289‑1 (MQ=255)
                                                   aaCTTTAACCGGAGACA‑CCTGTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGAAAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGGGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTAt                                                                                                                                                                                                                                <  2:13232/289‑1 (MQ=255)
                                                      tttCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAg                                                                                                                                                                                                                             <  1:637975/289‑1 (MQ=255)
                                                       ttCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGc                                                                                                                                                                                                                            >  1:667975/1‑289 (MQ=255)
                                                         cAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAAGCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTGGCCAGACCGGAGCCACGGAGTATGGCCTGTGTCGGCCAGATTTCAGGGACACACACTGCCGAGGCATAG‑CAAACGT‑CAAATGAGACGAAAGTAAGCAGGACACAACCAATCAACGACATGACCaa                                                                                                                                                                                                                          >  2:412011/1‑289 (MQ=255)
                                                         cAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCaa                                                                                                                                                                                                                          >  2:325042/1‑289 (MQ=255)
                                                          aaCGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAg                                                                                                                                                                                                                             >  2:1006960/1‑285 (MQ=255)
                                                             ggAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATa                                                                                                                                                                                                                      <  1:325042/289‑1 (MQ=255)
                                                                        ttGGTTTCGATTCCAATGGTGGCGATAGCCATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCa                                                                                                                                                                                                            <  2:1063355/289‑1 (MQ=255)
                                                                        ttGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCa                                                                                                                                                                                                            >  1:116290/1‑289 (MQ=255)
                                                                        ttGGTTTCGATTCCAAGGGGGGAGAAAGCAATGGCGACACTAATAGAAACCGCCCCCAGAAGACTAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCa                                                                                                                                                                                                            <  2:603263/289‑1 (MQ=255)
                                                                         tGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAg                                                                                                                                                                                                           >  2:643202/1‑289 (MQ=255)
                                                                             ttCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaa                                                                                                                                                                                                       <  1:300705/289‑5 (MQ=255)
                                                                             ttCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaa                                                                                                                                                                                                       <  1:244798/289‑5 (MQ=255)
                                                                             ttCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtga                                                                                                                                                                                                        <  1:1480277/288‑4 (MQ=255)
                                                                             ttCGATTCCAATGGTGGCGATAGCAATTGCGAAAATAATTGAACCCGGCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtga                                                                                                                                                                                                        <  2:1276424/288‑4 (MQ=255)
                                                                              tCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaat                                                                                                                                                                                                      >  1:1504727/1‑284 (MQ=255)
                                                                                gATTCCAATGGTGGCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACCGCAACGGCATAAGGTGCGGCAATACCACTCATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACCGCCGAGGCATAG‑CAACCGTACATAT‑AGACGAAAGTAATCACGAAGAAACCAATCAACGTTACGAGCAACAAACTGGttacacgtgaagtg                                                                                                                                                                                                    >  2:1661751/1‑277 (MQ=255)
                                                                                            ggCGATAGCAATTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAg                                                                                                                                                                                         <  1:1917312/288‑1 (MQ=255)
                                                                                                     aaTTGCGACAATAATTGAAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATc                                                                                                                                                                               <  1:29252/289‑1 (MQ=255)
                                                                                                             cactaattgaaaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTTCTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGCTTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTaa                                                                                                                                                                       <  2:1577749/279‑1 (MQ=255)
                                                                                                              aataattgaaaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGTCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAAt                                                                                                                                                                      <  1:402362/280‑1 (MQ=255)
                                                                                                              aataattgaaaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAAt                                                                                                                                                                      <  1:416357/280‑1 (MQ=255)
                                                                                                                   ttgaaaCCGCCCCCAGAAAAAAAAACACTACCGTAACGCCAAAACGCCTGGGAAGCACTGCAACGGCATAAGGTGCGGCAATACCACCGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGccc                                                                                                                                                                 <  2:1366042/285‑1 (MQ=255)
                                                                                                                       aaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCcac                                                                                                                                                              <  1:1226609/288‑1 (MQ=255)
                                                                                                                       aaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCcac                                                                                                                                                              <  1:1647192/288‑1 (MQ=255)
                                                                                                                       aaCCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCcac                                                                                                                                                              <  1:1856618/288‑1 (MQ=255)
                                                                                                                                    agaaTAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAA‑GGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTAcg                                                                                                                                               <  2:129316/289‑1 (MQ=255)
                                                                                                                                             aCTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaataga                                                                                                                                                                                                   >  1:55231/1‑221 (MQ=255)
                                                                                                                                              cccccGTAACGCCATAACTACGGGGCAGCACTGCAACGGCATAAGGGGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAAttt                                                                                                                                       <  2:1504727/286‑1 (MQ=255)
                                                                                                                                                  cGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATcc                                                                                                                                  >  1:1564291/1‑289 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTTCCGAGGCATAG‑CAAACGTATATAT‑ATACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAAAAGATATATCCGAGCACCGCAATCAGGATTAAAAGCTAAACACACATTGTTTTACGCGTAATTTTTGCCATCAACAGCACggaat                                                                                                                  >  2:1194378/1‑286 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCACTCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGCATTTTATCCATCACCAGCATGGCaa                                                                                                                  >  1:1257648/1‑289 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaa                                                                                                                                                                                                       <  1:1326981/204‑5 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGtt                                                                                                                                                    <  1:979934/255‑1 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCAACAGCATGGCaa                                                                                                                  >  2:404860/1‑289 (MQ=255)
                                                                                                                                                                  ctGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTAACGCATTCGCCAGACCGGAGCCACGTAGTTTTGCCTCTGTCGGCCAGATTTCAGGGCCATACACTGCCGAGGCATCG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAACAAACCAATCCAAGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACACCAATCATGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTACCCAGCACCAGCATCGCaa                                                                                                                  >  2:1637435/1‑289 (MQ=255)
                                                                                                                                                                    gAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCCACAGCATGGCAATa                                                                                                                >  1:1002831/1‑289 (MQ=255)
                                                                                                                                                                    gAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATa                                                                                                                >  2:18932/1‑289 (MQ=255)
                                                                                                                                                                          caCTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGGTTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATa                                                                                                          >  2:1122117/1‑289 (MQ=255)
                                                                                                                                                                          caCTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAAt                                                                                                           >  1:477234/1‑288 (MQ=255)
                                                                                                                                                                               cAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGc                                                                                                                    <  2:429118/274‑1 (MQ=255)
                                                                                                                                                                               cAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCaaa                                                                                                     >  1:1114736/1‑289 (MQ=255)
                                                                                                                                                                               cAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCaaa                                                                                                     >  1:1791086/1‑289 (MQ=255)
                                                                                                                                                                                    gCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaat                                                                                                                                                                                                      <  1:581904/187‑6 (MQ=255)
                                                                                                                                                                                       tAAGGTGCGGCAATCCCCCTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGgcgcgc                                                                                             <  1:1883678/289‑1 (MQ=255)
                                                                                                                                                                                       tAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGgcgcg                                                                                              >  1:140766/1‑288 (MQ=255)
                                                                                                                                                                                       tAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGgcgcg                                                                                              >  1:1867382/1‑288 (MQ=255)
                                                                                                                                                                                            tGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAAc                                                                                        >  2:1473532/1‑289 (MQ=255)
                                                                                                                                                                                              cGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACAt                                                                                      >  1:447403/1‑289 (MQ=255)
                                                                                                                                                                                               ggCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATa                                                                                     >  2:398644/1‑289 (MQ=255)
                                                                                                                                                                                                gCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATa                                                                                     <  2:447403/288‑1 (MQ=255)
                                                                                                                                                                                                   aTACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTGTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCa                                                                                 <  1:1010984/289‑1 (MQ=255)
                                                                                                                                                                                                     aCCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATg                                                                               <  1:706597/289‑1 (MQ=255)
                                                                                                                                                                                                      ccACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATgg                                                                              >  1:88679/1‑289 (MQ=255)
                                                                                                                                                                                                      ccACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACAATGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATgg                                                                              >  2:835743/1‑289 (MQ=255)
                                                                                                                                                                                                              tCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACAATGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATCAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTaaa                                                                      >  1:1939982/1‑289 (MQ=255)
                                                                                                                                                                                                                      ccGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAAtcga                                                              >  1:183293/1‑286 (MQ=255)
                                                                                                                                                                                                                           ttCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTAcg                                                                                                                                               <  2:92719/203‑1 (MQ=255)
                                                                                                                                                                                                                           ttCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTAcg                                                                                                                                               >  1:92719/1‑203 (MQ=255)
                                                                                                                                                                                                                           ttCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATg                                                                               >  1:785679/1‑267 (MQ=255)
                                                                                                                                                                                                                              gCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAgtgaa                                                                                                                                                                                                       >  2:226134/1‑140 (MQ=255)
                                                                                                                                                                                                                                    ccGGAGCGACGGGGTTTGGCCTCTGGCGGCCAGATTTCAGGGACATACACTGACGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTa                                                 <  2:1564291/288‑1 (MQ=255)
                                                                                                                                                                                                                                    ccGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTa                                                 <  2:184339/288‑1 (MQ=255)
                                                                                                                                                                                                                                        aGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCAt                                                                                                                                >  1:719055/1‑205 (MQ=255)
                                                                                                                                                                                                                                        aGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCAt                                                                                                                                <  2:719055/205‑1 (MQ=255)
                                                                                                                                                                                                                                           cACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCt                                          <  2:655600/288‑1 (MQ=255)
                                                                                                                                                                                                                                           cACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCt                                          <  1:866983/288‑1 (MQ=255)
                                                                                                                                                                                                                                            aCGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTgg                                        <  1:816476/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATcccc                                           <  1:1375786/285‑1 (MQ=255)
                                                                                                                                                                                                                                               gAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACCTACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGt                                      <  2:877908/288‑1 (MQ=255)
                                                                                                                                                                                                                                                           tGTCGGCCAGATTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAATAttgtt                         >  1:888692/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  cAGAGTTCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAG‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAAc                   <  2:533613/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAACCAGTTaa            <  2:55395/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tCAGGGACATACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAACCAGTTaa            <  1:1122117/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gggtaCATACACTGCCGAGGCATGC‑CAAAAGTAACAAT‑CGACGAAAGTAATCAGGAAGAAACCAATCACCGTTATGAGCAACATACTTGTTTGCAGTGAGTAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGAATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAACCAGTTaagt          <  2:1377906/285‑3 (MQ=255)
                                                                                                                                                                                                                                                                                 tACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAata                              <  1:781797/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 tACACTGCCGAGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGTGAATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATCGAGTCTTTTAAATTAATCCCCTGGGTCATGAata                              >  2:781797/1‑262 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                         
TTTCATTTTGAATCCACCCGTATTATTTATTGGCTACTGCATCAATACTTAAACTTTCAACGGAGACA‑CCTTTGGTTTCGATTCCAATGGTGGCGATAGCAATTGCGACAATAATACTAACCGCCCCCAGAAGAATAAAGACTCCCGTAACGCCATAACTACTGAGCAGCACTGCAACGGCATAAGGTGCGGCAATACCACTGATTCGCCCTACCGCATTCGCCAGACCGGAGCCACGGAGTTTGGCCTCTGTCGGCCAGATTTCAGGGACATACACTGCGCTGGCATAG‑CAAACGTACATAT‑AGACGAAAGTAATCAGGAAGAAACCAATCAACGTTATGAGCAACATACTGGTTTGCAGACTATAGATATATCCGAGCACCGCAATCAGGATTAATAGCCCCACACCCATTGTTTTACGCGGAATTTTATCCATCACCAGCATGGCAATAAAAATACCAAATGGCGCGCCAAACATACTCATGGTATTTAAAACAATGCTGTCTTTTAAATTAATCCCCTGGGTCATGAATATTGTTGGCAACCAGTTAATTAGTGTGTA  >  CP042583/1540884‑1541445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A