Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,541,809 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,541,8090AT99.6% 614.6 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (163/95);  total (165/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,541,8100CG99.6% 613.3 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (163/96);  total (165/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,541,8110TA100.0% 625.7 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (165/96);  total (165/96)

Only 100 of 261 total aligned reads displayed.

CACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGGCTCAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAA‑CCATGCTGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTG  >  CP042583/1541530‑1542088
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
   cGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCa                                                                                                                                                                                                                                                                               >  1:885278/1‑289 (MQ=255)
     cTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTCAGTCCCATCGCTATCAATGAATAGAGCGGATAAGACCAGGTGCCact                                                                                                                                                                                                                                                                             >  2:309090/1‑287 (MQ=255)
                ttACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAAcc                                                                                                                                                                                                                                                                   >  2:1258370/1‑288 (MQ=255)
                          caGAAATAACCACAGGCGGCAACGTTTTACCCGTCTGGCGTATGACGCCTTCGTCTATACCCCGCCTGCCTTTCTCGGCTTCCTGATCCCGTCCGCGGGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttgacca                                                                                                                                                                                                                                                        <  2:527094/289‑7 (MQ=255)
                                          cggcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCt                                                                                                                                                                                                                                         >  1:1435408/1‑288 (MQ=255)
                                            gcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAcc                                                                                                                                                                                                                                      >  1:603163/1‑289 (MQ=255)
                                              aaaGGTTTACCCGTCTGGCGTAGGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCg                                                                                                                                                                                                                                     <  1:1317676/288‑1 (MQ=255)
                                                             tGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGa                                                                                                                                                                                                                     >  2:1464841/1‑289 (MQ=255)
                                                                    tGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGGAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTGGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGGTGCCAATAAAGGAAACCCGACTTGATCACGTTCCACGATTTCTACCGGGCATATCTTCGGTGAAACCAgg                                                                                                                                                                                                              >  1:1049573/1‑288 (MQ=255)
                                                                      acccattcttcTATCCTCCGCATGCCTTTCTCGGGTTCGTGATCCCGTCCG‑GGCAATCCAAGCGAGCGCGGGGATTCAGGAAAGTAGCCCCGGGCCAGCGCCGTAGCGAAACGCGACAATATGGCA‑GGGATAAG‑CAGTTCTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCaa                                                                                                                                                                                                            <  2:746902/284‑1 (MQ=255)
                                                                       cGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATCTTCGGTGAAACCAGCaa                                                                                                                                                                                                            <  1:1258370/288‑1 (MQ=255)
                                                                         ccTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACa                                                                                                                                                                                                         >  1:911584/1‑289 (MQ=255)
                                                                                      tCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                                                                                                                       <  1:1725527/246‑1 (MQ=255)
                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAg                                                                                                                                                                                                                                                                         >  1:226606/1‑210 (MQ=255)
                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTcc                                                                                                                                                                                                                                                  <  1:1494302/233‑1 (MQ=255)
                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTaaa                                                                                                                                                                                           >  1:183981/1‑288 (MQ=255)
                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCATCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCCGTTAAACCAGCCAACAGCGTAACCAGTCAAGc                                                                                                                                                                                         >  2:1429823/1‑288 (MQ=255)
                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                                                                                                                         >  1:351700/1‑288 (MQ=255)
                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                                                                                                                         >  1:248404/1‑288 (MQ=255)
                                                                                             gACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCCGTCACGCTccc                                                                                                                                                                                     >  2:357365/1‑289 (MQ=255)
                                                                                                                  ccGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACaaaa                                                                                                                                                                >  2:926100/1‑289 (MQ=255)
                                                                                                                   cGTCCGCGCGATTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTCCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCCTAACCAGTAAAGCTCCCAGCCCAACTCCCACCACaaaaa                                                                                                                                                               >  2:1335983/1‑288 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTcc                                                                                                                                                                                                                                                  >  2:1352212/10‑204 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTcc                                                                                                                                                                                                                                                  <  1:1352212/195‑1 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAACCCAGCAACCAGCGTAACAAGTAACGCCCCCAGCCCACCCCCCATCCCAAAACg                                                                                                                                                              >  2:1089706/10‑288 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCa                                                                                                                                                                                                             >  2:1829875/10‑241 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGc                                                                                                                                                                                                       <  1:631808/238‑1 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACgg                                                                                                                                                             >  1:621032/10‑289 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                                                                                                                              >  1:478309/10‑288 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                                                                                                                              >  1:937658/10‑288 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                                                                                                                              >  1:206977/10‑288 (MQ=255)
                                                                                                                     tccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                                                                                                                              >  1:1269815/10‑288 (MQ=255)
                                                                                                                      ccgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggc                                                                                                                                                            <  2:60518/281‑1 (MQ=255)
                                                                                                                      ccgcgaggttCC‑AGCACGCGGGGGGATACAGGAAAGGAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggc                                                                                                                                                            <  2:1316636/281‑1 (MQ=255)
                                                                                                                       cgcgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                                                                                                                           >  1:1893004/8‑289 (MQ=255)
                                                                                                                       cgcgcgattCC‑AGCCAGCGCGGGGATTAAGGAAAGTAGCGCCAGGCCAGCTCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTCCCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                                                                                                                           <  1:670564/282‑1 (MQ=255)
                                                                                                                         cgcgattCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACAAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggcag                                                                                                                                                          >  1:721636/6‑288 (MQ=255)
                                                                                                                                     ccagcGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGaaa                                                                                                                                              >  1:1145401/1‑289 (MQ=255)
                                                                                                                                     ccagcGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCCCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGaaa                                                                                                                                              <  1:1089706/289‑1 (MQ=255)
                                                                                                                                         cgcgGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGa                                                                                                                                                                                                                                                                       >  2:1055220/1‑164 (MQ=255)
                                                                                                                                         cgcgGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTaaa                                                                                                                                                                                           >  2:834022/1‑240 (MQ=255)
                                                                                                                                         cgcgGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                                                                                                                           >  2:830418/1‑272 (MQ=255)
                                                                                                                                            ggggTTTCGGGAAGGACGCCCCAGCCCAACCCCGTAGCGAAAACGGACAA‑AATGCAGGGGTTAGG‑CATTTGAACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCata                                                                                                                                        <  2:249172/288‑1 (MQ=255)
                                                                                                                                            ggggATTGAAGAAAGGGGCGCCAGGCCAGGGCGGTAGAGATAAGGCACAATATCGCA‑CGGATCAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCata                                                                                                                                        <  2:1910835/288‑1 (MQ=255)
                                                                                                                                                                     ccagCGCCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCa                                                                                                              >  1:1585447/1‑288 (MQ=255)
                                                                                                                                                                         cgcCGTAGCGCAAAGCAACAATATTGAG‑CGGCAAGG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCAtcga                                                                                                          <  2:784743/288‑4 (MQ=255)
                                                                                                                                                                          gcCGTAGCGATAAGCGACAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCAtcgag                                                                                                         <  1:926100/288‑5 (MQ=255)
                                                                                                                                                                                   atacgcgaatatatTGCA‑GGGATAAG‑CAGTTATACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGaa                                                                                               <  2:376307/279‑1 (MQ=255)
                                                                                                                                                                                    taagcgacAATATTGAA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGaa                                                                                               <  1:1517874/281‑1 (MQ=255)
                                                                                                                                                                                    taagcgaaaaTATTCCG‑GGGATAAG‑CATTTTTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGaa                                                                                               <  1:309090/280‑1 (MQ=255)
                                                                                                                                                                                      agcgacAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAC‑ACACCGAGGCAATATGaacg                                                                                             >  2:72645/6‑286 (MQ=255)
                                                                                                                                                                                      agcgacAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATg                                                                                             >  1:1569949/6‑288 (MQ=255)
                                                                                                                                                                                        cgacAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATgg                                                                                            >  1:1750761/4‑287 (MQ=255)
                                                                                                                                                                                         gaaaaTATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGc                                                                                           <  2:933327/284‑1 (MQ=255)
                                                                                                                                                                                         accactatTGCA‑GGGCTAGG‑CAGTTGAACCCGCCGGTTCCACTATGCAATAATCCGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGc                                                                                           <  2:1266519/282‑1 (MQ=255)
                                                                                                                                                                                               tttGCA‑GGGTTAAGCCATGTGACCCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATag                                                                                    <  2:1513090/288‑1 (MQ=255)
                                                                                                                                                                                                ttGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCCCAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCCAGGCAATATGAATGGCCTCAAagag                                                                                  >  2:174904/1‑289 (MQ=255)
                                                                                                                                                                                                 tGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAgg                                                                                 >  1:1200250/1‑289 (MQ=255)
                                                                                                                                                                                                    a‑GGGATAAG‑CCGTTGGACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGAt                                                                               <  1:1330260/288‑1 (MQ=255)
                                                                                                                                                                                                    a‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGAt                                                                               <  1:54978/288‑1 (MQ=255)
                                                                                                                                                                                                         aTAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACg                                                                          >  1:1847622/1‑289 (MQ=255)
                                                                                                                                                                                                         aTAAG‑CAGTTGTACCCGCCAGTTCCACTCTGAACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAAc                                                                           >  1:1665716/1‑288 (MQ=255)
                                                                                                                                                                                                                    gTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCCCAAAACGGCAGGCACTAAGGAAATCCATATTCGGTGAGAAAGAACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCg                                                                >  2:558989/1‑289 (MQ=255)
                                                                                                                                                                                                                    gTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGCCAA‑CCATCGAGGCAATATGAATGGCCCCATAGAGGAGTAACGCATTTCTGCg                                                                >  2:1642546/1‑289 (MQ=255)
                                                                                                                                                                                                                    gTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCg                                                                >  2:659072/1‑289 (MQ=255)
                                                                                                                                                                                                                         cGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGc                                                                                           <  2:637022/257‑1 (MQ=255)
                                                                                                                                                                                                                          gCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGt                                                          >  2:962394/1‑289 (MQ=255)
                                                                                                                                                                                                                            cAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATACGGAAATCCATATTCGGTGACAAAGCACCGACAA‑CCATAGAGGCAATATGAATGGCCACATAGAGGAGGAACGCAACTCTGGCACCGGttt                                                        >  2:688439/1‑289 (MQ=255)
                                                                                                                                                                                                                            cAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCggtgagaaa                                                                                                                            <  1:1794561/222‑8 (MQ=255)
                                                                                                                                                                                                                            cAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGttt                                                        >  1:436118/1‑289 (MQ=255)
                                                                                                                                                                                                                            cAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGttt                                                        >  1:744534/1‑289 (MQ=255)
                                                                                                                                                                                                                                tCCACACGGCACTAATCAGCGGCGTTAGTCCCATCGCTATCAATGAACAGGGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGtttt                                                       <  2:478309/286‑1 (MQ=255)
                                                                                                                                                                                                                                    ctctGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCa                                                >  1:256957/1‑289 (MQ=255)
                                                                                                                                                                                                                                    ctctGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGAGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTCGTCGCCa                                                >  2:1530089/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAatgat                                           >  1:656669/1‑289 (MQ=255)
                                                                                                                                                                                                                                         cACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCA‑GCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAatgat                                           >  1:164873/1‑288 (MQ=255)
                                                                                                                                                                                                                                          acaaagcAGCTGCGTGAGTCCCATCGCGATCAATGAAACAAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAatgatg                                          <  2:1145401/283‑1 (MQ=255)
                                                                                                                                                                                                                                          aCTAATCAGCGGCGTGAGTCCCATCGCTATCACTGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCAAGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAatgatg                                          <  2:903200/289‑1 (MQ=255)
                                                                                                                                                                                                                                             aaTCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATgccg                                       <  1:830423/289‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATgccg                                       >  1:1084718/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 aGCGGGGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑ccc                                   >  2:1087166/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   cggcgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGaa                                                                                                                                               <  2:1678270/180‑1 (MQ=255)
                                                                                                                                                                                                                                                   cggcgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATCTTCGGTGAGAAAGCACCGCCAACCCACGC‑GGCAATACTAATGGCCACATAGAAGAAGAACGCATTCCTGCGACCGGGTCTGTAGAGAATGATTCCG‑Cacac                                 >  2:1597286/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   cggcgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑Cccacc                                >  2:1614706/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   cggcgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑Cccacc                                >  1:1293530/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   cggcgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑Cccac                                 >  2:151207/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      cgTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTCAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAg                              >  2:1887100/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        tGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGCGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAgcgc                           >  1:88890/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aTCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGaa                   >  1:1553283/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      atcaatgaaCAGAGCGGATATTACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAAGAAGGACATCCATATTCGGCTAGAAAGCACCGCCAA‑CCAATGAGGCAAAATGAATTGCCTCATAGAGGATGAACGCCTTTATGAGACCGGCTTTTGCGCACATGACTCCGACGCACCGGCG‑ACCGAAGAACATTc             >  2:28514/9‑289 (MQ=255)
                                                                                                                                                                                                                                                                      atcaatgaaCAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGTTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTGGTCGCCAATGAGGCGG‑CCCACCCGCGAACCGACAAAAAtt              >  2:1173439/9‑288 (MQ=255)
                                                                                                                                                                                                                                                                      atcaatgaaCAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACAtc              >  2:1037694/9‑287 (MQ=255)
                                                                                                                                                                                                                                                                         aatgaaCAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCCATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGCGGATGAACGCATTTCTGCGACCGGATTTGTCGCCACTGATGCCG‑CCCACCCGCCCACCGCGAAACATTCcg           >  2:213147/6‑288 (MQ=255)
                                                                                                                                                                                                                                                                         aatgaaCAGAGCGGAAACGAACAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACATTCcgg          <  2:1569949/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGaa                                                                                               >  1:1169915/1‑197 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAgcg                            <  1:1377412/263‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAgcg                            >  2:1377412/1‑263 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTg  >  1:100939/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTg  >  1:407222/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 gagCGGATATGACCAGTTGCCAATAAAGGAAACCAGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCCGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACCAACCGGCAGGCAATAAGGAAATCCATATTCAGTGAGACAGCACCGACCA‑CCATCGAGGCAATATGAATGGCCTCATAGAGGATGAACGCATTCCTGCGCCCGGCTCTGTTGCCAATGATGGGT‑CCCACCACCGCACCGAGACCCATTCAGGCGGtagcg  >  2:1163895/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                       
CACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCC‑AGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGGCTCAATATTGCA‑GGGATAAG‑CAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAA‑CCATGCTGGCAATATGAATGGCCTCATAGAGGATGAACGCATTTCTGCGACCGGTTTTGTCGCCAATGATGCCG‑CCCACCAGCGCACCGAGAAACATTCCGGCGGTCGTG  >  CP042583/1541530‑1542088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A