Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,549,336 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,549,336 | 0 | A | T | 99.4%
| 411.6
/ NA
| 174 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (95/78); minor base G (0/1); total (95/79) |
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | CP042583 | 1,549,337 | 0 | G | C | 99.4%
| 407.1
/ NA
| 174 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (95/78); total (95/79) |
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,549,338 | 0 | T | A | 100.0%
| 410.6
/ NA
| 174 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (95/79); total (95/79) |
Only 100 of 174 total aligned reads displayed.
TCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑AGTAGCCTTGCTGAGCGACTGAAAAGTTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGAGCCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGAGTATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAAC > CP042583/1549056‑1549617
|||
aGTGCTTGTGCCAACGCGGCTGAGCGGCACTTTATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTAATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGc < 2:224757/289‑1 (MQ=255)
gCTTCTGCCAACGCGGCTGAGCGGCTATTGATGGCTTTCTGTTGGCCTGTCATGGTCGATACAGCCCAGGAACCCACACTTTCTCGATTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGc < 2:961402/286‑1 (MQ=255)
ttATGCCACCGCGGCTGTGCGGCTCTTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGt < 2:891260/288‑1 (MQ=255)
ttATGCCAACGCGGCTGGGCGGCTTTTGATGGCTATCGGTGGGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTa < 2:1825506/289‑1 (MQ=255)
tggCCAACGCGGCTGGGCGGCTATTGATGGCTATGGGGGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTAcc < 2:729573/287‑1 (MQ=255)
aTGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGCTTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGGGGGTGGGGGTAAA‑TCATCGCTTGCTGATCGACTGAAATCATTAATGCAGCTCGTAcc > 2:1760641/1‑289 (MQ=255)
aaCGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTTCGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGAttt < 1:215337/289‑1 (MQ=255)
cgcgGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGCTTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGCGAAGAAACAAACCCTGTAT‑CTGCTGGGGCCTGTGGGAGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAAGGGAGCTCGTTCCGaagtct > 2:1677581/1‑284 (MQ=255)
cgcgGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGa < 1:1755418/284‑1 (MQ=255)
cgcgGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCCCGTACGGATTTAt > 1:445271/1‑289 (MQ=255)
tGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTCCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTg < 1:1765110/289‑1 (MQ=255)
ggCTAGTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCTACTCTTTTCTAACCTTGTCATTGCACGTTATCCGGCGTTTACCTCGTTTTACGGCATGTCTCACACGATTGACCAACTTGTCTCTTATCTGAAACACGCGGCTCAGGTCCTTGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGTGTAAA‑TCATCGCTTGCTTAGCTACTGAAATCATTCCTTCCTCTCTTCCCGATTTATGTATTGAgcg < 1:108014/288‑1 (MQ=255)
aTTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAAc < 1:178742/289‑1 (MQ=255)
tggtGGGTATCGGTGGGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTGTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACgg < 1:107127/286‑1 (MQ=255)
tGATGGCTATGGGTGGGCCTGGCAGGGTCGTTACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACgg < 2:1009740/289‑1 (MQ=255)
tGATGGCTATCGGGGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACgg < 1:313263/289‑1 (MQ=255)
gTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTGCTCGACTCTTTTCTACCCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGcc < 1:489917/288‑1 (MQ=255)
acTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTc < 1:1008866/287‑1 (MQ=255)
cATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGat < 2:1836744/289‑1 (MQ=255)
tCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATACTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATcc > 1:237775/1‑289 (MQ=255)
cccAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACg > 1:1215746/1‑273 (MQ=255)
gAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCttttta > 1:1700216/1‑287 (MQ=255)
aaaccATACTTTCTCGACTCTTTTCTACCCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTAGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCa < 1:1391799/285‑1 (MQ=255)
aCCCCGTCTTTCCTGGCTTTTTTACAACCGGGTCATTGAATGTTATCCGGCCTTTGAATAGTTTTACGGCAAGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCGCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAAt < 2:50373/289‑1 (MQ=255)
cAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATcc > 1:1308130/1‑288 (MQ=255)
cAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGAAGCTCGTACCGATTTATGTATTGAGCGCGACCGGTGAGAGTAGCCGGGTCAACGATCATCCGTTCTGTTTTATCAATcct > 1:684976/1‑288 (MQ=255)
cAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAA‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATGTAGGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTGAAtac > 1:873654/1‑286 (MQ=255)
cAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGGTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATTCGTTCTGTCTTTTCAATcc > 2:174519/1‑288 (MQ=255)
cAGACTTTCTCGACTCTTTTCTAACCGGGTCATCGCACGTTATCCGGCGTTTGAAGGGTTTTACGGCCTGGAAGACGCGATTGTACAGGTTGTCTGTTATCTGCAACACGCGGCTCCGGGGCCGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGGGGGTGGGGGTAAA‑TCACAGCTTGCCTAGCGACTGAAGTCATTAATGCAGCTCGTACTGATTTCTGTATGTAGAGCGAATCGGGAGCTGCGCCCGGTCAGAGACCATCTCTTCTTCCTTTCTAATcg > 2:1514633/1‑287 (MQ=255)
ctctTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCaa < 2:1910763/272‑1 (MQ=255)
ctctTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCaa > 1:1910763/1‑272 (MQ=255)
ctctTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATgcgc > 1:77977/1‑289 (MQ=255)
gggTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaa > 1:1768021/1‑289 (MQ=255)
gTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAAt > 1:215723/1‑258 (MQ=255)
gTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAag > 1:1345300/1‑289 (MQ=255)
gTCATTGCACATTATCCGGCGTTTTAAGAGTTTTACGGCATTGAATACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCTGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTTGGGCCTGTGGGTGGAGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCATCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaaa < 1:1524330/288‑1 (MQ=255)
tCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCt < 2:1398256/289‑1 (MQ=255)
ccGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGcc < 1:1363823/211‑1 (MQ=255)
ggCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTc > 1:1857561/1‑263 (MQ=255)
ggCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTc < 2:1857540/263‑1 (MQ=255)
ttaaGGGTTTTACGGCATGGAAGACGCGATAGAACAGATTTGCTCTTATCGGAACGACGCGTCTCAGGGGCTGGAAGAGACGAAACATATCCTGTAG‑CTGCTGTGGCCTGTGGGTGTTGCTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTGGCCCGGTCAACGTTCATCCGTTCTGTCTTTTCAATCCGCGTGAATATGCGCAGATTCTGGAAAAAGAGTATGTCATTCCTCGCCGTTAt < 2:445271/287‑1 (MQ=255)
agatTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAtct < 1:1589121/288‑1 (MQ=255)
agTTTTACGGCATGGAAGACGCGATTGAACAGATTGGCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCt < 1:1196727/275‑1 (MQ=255)
gTTTTACGGCATGGAAGACGCGATTGAACAGATTGCCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCgg < 2:292940/288‑1 (MQ=255)
tGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCCCGCCGTTTTCCCGGCACca‑tatggtc > 2:1219483/1‑283 (MQ=255)
tGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATACTGTAT‑CTGCTGGGGCCTGTGGGCGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGTAATCATTCCTGCAGCTCGTACCGACTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTAAACGATCATACGTTCTGACTTCTCTATCCGCAGGAAGATGCGCATATTCTGGAAACAGCATAAGGCATTCCTCGCCGTTACCGCGGCTCCA‑TCCTgt > 2:1634118/1‑287 (MQ=255)
tGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAAATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGATACCTCGGCACCA‑TCCTGTCGCAGTGGGCGGCa > 2:1912123/1‑289 (MQ=255)
cAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 1:166087/236‑1 (MQ=255)
cAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa > 2:166087/1‑236 (MQ=255)
tGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCt > 1:1137015/1‑288 (MQ=255)
tctcTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGt < 2:1865753/245‑1 (MQ=255)
aTCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGCGCGTAGCCCGGTCAACGCTCATCCCTTCTGTCTTTTCAATCCGCAGGCAGATGCGCAGATGCTGGAAAAAGAGTATGGCATTCCTCGCCTTTATCTCGGCACCACACATCCG‑CAGTGGGCGGCAAAACGCCtcgaggacat > 2:598048/1‑280 (MQ=255)
aTCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAAtt > 2:1075915/1‑289 (MQ=255)
aTCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGGGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTAATGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCCGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAAtt > 2:749937/1‑289 (MQ=255)
gAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTtggt > 1:361425/1‑289 (MQ=255)
gAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTGATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTtggt > 2:397200/1‑289 (MQ=255)
aaaCACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTtggtg > 2:922417/1‑289 (MQ=255)
aaCACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTtggtgg < 1:1202567/289‑1 (MQ=255)
cacGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCg > 1:420589/1‑289 (MQ=255)
gcgGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGGGTATGGCATTCCTCGCCGTTATCCCGGCCCCA‑GCATTTCGCCGTGGGCCACAAAACGCATGCATGAATTTGGTGGCGata > 2:800316/1‑289 (MQ=255)
cAGGGGCTGGAGGGGAAGGAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTCCCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACt < 2:1552357/288‑1 (MQ=255)
gggCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGGCAAACGCCGGCCTGAATTTGGTGGCGATCTCACTAAGt > 2:1310830/1‑289 (MQ=255)
gCTGGAAGGGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAATCATAG‑CTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGtt < 2:1169074/288‑1 (MQ=255)
gCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGtt < 2:1277323/288‑1 (MQ=255)
tGGAAGAGAGAAAACAAAGCCTGTAT‑CTGCTGTGGCCTGGGGGTGGGGGTAAC‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCg < 2:1098037/289‑1 (MQ=255)
ggAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGc > 2:1382633/1‑223 (MQ=255)
ggAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTg > 1:1037383/1‑256 (MQ=255)
ggAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACt > 2:947503/1‑280 (MQ=255)
ggAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACt < 1:947503/280‑1 (MQ=255)
ggAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCgg > 1:124531/1‑289 (MQ=255)
aagagaagaAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCggg < 2:424085/288‑1 (MQ=255)
aagaaAACAATGCTGTATGCTG‑TGGGGTCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTTGGCGACTGAAATCAATAATGCAGCTCGTACCTATTTATGTATTGAGCGCTAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTg < 2:480884/288‑1 (MQ=255)
agaaACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCTGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGaa > 2:214555/1‑289 (MQ=255)
agaaACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGaa > 2:338586/1‑289 (MQ=255)
aaCAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAACAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATGTGGTGGCGATATCACTAAGTTCCGGGTAGTGaatg > 2:1300951/1‑286 (MQ=255)
aCAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAgg > 2:843786/1‑287 (MQ=255)
aCAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTc < 1:1360137/289‑1 (MQ=255)
tGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGAATTCACTAAGTTCCGGCTAGTGAAGGTCTGGCCGac > 2:1124910/1‑288 (MQ=255)
gTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCgtca > 1:1858083/1‑286 (MQ=255)
gctgGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCgtcaattct > 1:456054/1‑280 (MQ=255)
gctgGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCCCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGCATTTGGTGGCGACATCCCTGAGTTCCGGTTAGTGAAGGTCTGGCCgtcatttct > 2:1377392/1‑280 (MQ=255)
tgGGGCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGca > 1:1260261/1‑289 (MQ=255)
ggggCCTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGca > 1:1116725/1‑288 (MQ=255)
ccTGTGGGTGGGGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACaaa > 1:1875241/1‑289 (MQ=255)
tgggtgggGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGc < 2:905340/219‑1 (MQ=255)
tgggtgggGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGc > 1:905340/1‑219 (MQ=255)
tgggtgggGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAAtt > 1:1741133/1‑287 (MQ=255)
tgggtgggGGTAAA‑TCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAAtt > 1:1425481/1‑287 (MQ=255)
taaatcatcgcTTGATGAGCGACTGAAATCATTAATGCAGCCCGTACGGACTTATGTATTGCGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCTTTTTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAACAAGAGTATGGCATTCCTCGCCGTTATATCGGCACAC‑TCATGTCGCAGCGGTATGCAAACCGCCTGCATTAATTTGGTGGCGATATCACTAACTACCTGGACGCGACGGACTGTCAGCCAATTCTGAAACAACGTGCTATCGCaaaa > 2:1005797/11‑289 (MQ=255)
aatcatcgcTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAAc > 2:798916/9‑289 (MQ=255)
aatcatcgcTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAAc > 1:1848361/9‑289 (MQ=255)
aatcatcgcTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAAc > 2:1935968/9‑289 (MQ=255)
gcTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGca < 2:1352456/260‑1 (MQ=255)
tgcgCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGGGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGATCCCGGCGa < 1:1514633/285‑1 (MQ=255)
tGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGAt > 1:565081/1‑289 (MQ=255)
cGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCAGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACTA‑TCGTGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGCAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACTGAACTCGGCCATcaga > 1:1229795/1‑289 (MQ=255)
gACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATgaga < 2:1752153/288‑1 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGaac > 2:614656/1‑289 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGaac > 1:398816/1‑289 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGTCGCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGTCAATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGaac > 1:1149475/1‑289 (MQ=255)
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TCGCAGTGCTTATGCCAACGCGGCTGAGCGGCTATTGATGGCTATCGGTGAGCCTGTCATGGTCGATACAGCCCAGGAACCCAGACTTTCTCGACTCTTTTCTAACCGGGTCATTGCACGTTATCCGGCGTTTGAAGAGTTTTACGGCATGGAAGACGCGATTGAACAGATTGTCTCTTATCTGAAACACGCGGCTCAGGGGCTGGAAGAGAAGAAACAAATCCTGTAT‑CTGCTGGGGCCTGTGGGTGGGGGTAAA‑AGTAGCCTTGCTGAGCGACTGAAAAGTTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA‑TCATGAGCCCGTGGGCGGCAAAACGCCTGCATGAATTTGGTGGCGATATCACTAAGTTCCGGGTAGTGAAGGTCTGGCCGAGTATTCTGCAACAAATTGCTATCGCCAAAACGGAACCCGGCGATGAGAAC > CP042583/1549056‑1549617
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A