Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,572,480 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,572,4800GC99.2% 597.6 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (137/117);  total (137/120)
Fisher's exact test for biased strand distribution p-value = 2.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,572,4810CG99.6% 601.2 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (137/119);  total (137/120)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,572,4820TA99.2% 590.6 / NA 257intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base A (134/118);  total (137/120)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 257 total aligned reads displayed.

CATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGGCTGGTAAACGGCAATTTGTCGATAATTACCAAACTCAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGGCTGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAAGCTCTCGGCCTGTTCGATGCCAAGCCG‑GCTGGTGAAATGATGCAGATCGTCGTTCACGCTCAGCGTTGCACTGGTGAAGATCCAGCTACCGGGTTTTTGCGCCATTAACTCTTTGAATTT  >  CP042583/1572200‑1572761
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
cATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGTTCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACa                                                                                                                                                                                                                                                                                    <  2:717386/289‑1 (MQ=255)
cATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACa                                                                                                                                                                                                                                                                                    <  1:795614/289‑1 (MQ=255)
cATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACa                                                                                                                                                                                                                                                                                    <  1:1693654/289‑1 (MQ=255)
cATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGACAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACa                                                                                                                                                                                                                                                                                    <  1:486115/289‑1 (MQ=255)
          gTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTTACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATaaa                                                                                                                                                                                                                                                                           >  1:957198/1‑288 (MQ=255)
          gTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCTTGCGAGGTACACAGCATaaaa                                                                                                                                                                                                                                                                          >  1:951299/1‑289 (MQ=255)
                 ccGCGCAAACGACACTCTTCCATGCGCTCTTTTTACAGTGGATCAACCGGCTATGTAAACGTCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCATAAACTGCTGTATGCCACAAGAAGCGCATTACCGGCGCTGACAAATGGCTACAACAGTTGCCCTTTGCTGGTTGCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCTCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGAc                                                                                                                                                                                                                                                                   <  1:1783381/289‑1 (MQ=255)
                    cgcAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCgt                                                                                                                                                                                                                                                                >  1:1659086/1‑289 (MQ=255)
                          cGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAg                                                                                                                                                                                                                                                          <  1:1381371/289‑1 (MQ=255)
                                   tCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCgatga                                                                                                                                                                                                                                                 >  2:145051/1‑289 (MQ=255)
                                   tCCATGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACC‑AATACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCgatgat                                                                                                                                                                                                                                                <  2:1132892/289‑1 (MQ=255)
                                    ccctGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCgatgat                                                                                                                                                                                                                                                <  1:453458/286‑1 (MQ=255)
                                    ccATGGGCGCTTTTAACAGTGGATCAGCCGCGGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGAACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATGGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCgatgat                                                                                                                                                                                                                                                <  2:908230/289‑1 (MQ=255)
                                       tGCGCGCTTTTAACAGTGGATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCgg                                                                                                                                                                                                                                             >  1:663964/1‑289 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAACGCATAAAACAACGACAGTTGTTAGCTTCGATGCACGGTCGCAGCATTGCCgtga                                                                                                                                                                                                                            >  1:1818683/1‑286 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCATCATTGCCGCTa                                                                                                                                                                                                                            >  1:1353567/1‑289 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTa                                                                                                                                                                                                                            >  1:1419346/1‑289 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTa                                                                                                                                                                                                                            >  1:294074/1‑289 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTa                                                                                                                                                                                                                            >  2:1008/1‑289 (MQ=255)
                                                        ggATCATCCGGCGAGGTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGGGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGACGCTa                                                                                                                                                                                                                            >  1:1744901/1‑289 (MQ=255)
                                                            agtccggcgaagTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTACCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACATGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGGGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTg                                                                                                                                                                                                                        <  2:1818683/278‑1 (MQ=255)
                                                             atacggctggggaaaCGGCAATTTGTCGAGAATTACCAATGACAATGTATCGCCACGCACGACCACCCCTGCCCAGAAACTGCTAGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTGCGATGATCGGTCGCAGCATTGCCGCTAACTgg                                                                                                                                                                                                                       <  1:1835052/277‑1 (MQ=255)
                                                               ccggcgaggTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGAcc                                                                                                                                                                                                                                                                  <  1:704405/237‑1 (MQ=255)
                                                                   cgaggTAAACGGCAATTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCa                                                                                                                                                                                                                 >  1:1732067/4‑289 (MQ=255)
                                                                                caTTTCTCGATAGTTACCCATGACAATGTATCCCCACGCACGTCCACCCCTTCCCAGAAACTTCTGGTTGCCCCAAGACGCGCAATACCGGCGCTGACAGATTGCTACAACAGTTGCCCTTTGCTGGTTTCCCCCGCCAACAATTCAAGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTGCGATGTTCGGTCGCAGCATTGCCGCTAACTGGCGGGCAGAACCTGGCtggt                                                                                                                                                                                                    <  2:668436/288‑1 (MQ=255)
                                                                                 aTTTGTCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAACGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCtggtt                                                                                                                                                                                                   >  1:6315/1‑289 (MQ=255)
                                                                                      tCGATAATTACCAATGACAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGttt                                                                                                                                                                                              >  1:1095111/1‑289 (MQ=255)
                                                                                              gacacatgacAATGGATCGCCACGCACGTGATCCCCTTCCCTGAAACTGCTGGTTGCCACAAGCAGCGCATTACCTGCGCTAACAAATTGCTGCATAGGTGGCCCTTTGTTGGTTTCCACCTGCAACAGTACAGGAAGCGTCATGGTGGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAATACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGa                                                                                                                                                                                      <  2:1785742/280‑1 (MQ=255)
                                                                                                    tgacAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGCGGTACCAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTgcg                                                                                                                                                                                 >  1:1557586/4‑288 (MQ=255)
                                                                                                      gcgaggTATCGCCACGCACGTCCCCCCCGTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCgca                                                                                                                                                                               <  2:1386230/283‑1 (MQ=255)
                                                                                                          tGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAAc                                                                                                                                                                                                             <  1:597150/254‑1 (MQ=255)
                                                                                                          tGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAAc                                                                                                                                                                                                             >  2:597150/1‑254 (MQ=255)
                                                                                                          tGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGcaca                                                                                                                                                                          <  1:874905/289‑1 (MQ=255)
                                                                                                          tGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGATAACTGGCGAGCAGAACATGGCTGGGTGGTTTGCGGCAGATTGGgcaacaa                                                                                                                                                                           >  2:1190930/1‑287 (MQ=255)
                                                                                                            tagacacacgcaagTCCACCGCTTCCCAGAGACTGGTGGTGGCCACAGGAACCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGGCCGTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGcaca                                                                                                                                                                          <  2:1697187/281‑1 (MQ=255)
                                                                                                               cGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAAcc                                                                                                                                                                                                            <  2:1764145/250‑1 (MQ=255)
                                                                                                                    cgcacgTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCTAGCAGAACCTGGCTGGTTGGTTTGCCGCAGATTGCGCAGCCCACcgagaaca                                                                                                                                                                 >  2:1713088/1‑284 (MQ=255)
                                                                                                                      cacgTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGACGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACAGTTGTTAGCTTCGATGAGAGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGACGGGTGGGTTTTTGGCAGATCGAGCCGCACACAGAGTAACGc                                                                                                                                                               >  2:150183/1‑288 (MQ=255)
                                                                                                                      cacgTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTTCGGCAGATTGCGCAGcccacaagggaaacc                                                                                                                                                               >  2:107302/1‑279 (MQ=255)
                                                                                                                           ccACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCAGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTTCGGCAGATGGCGCAGCACACAGAGGAACGCCTggcg                                                                                                                                                         >  2:1200917/1‑289 (MQ=255)
                                                                                                                              ccccTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTggcg                                                                                                                                                         >  1:1508617/1‑286 (MQ=255)
                                                                                                                              ccccTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTggcg                                                                                                                                                         >  1:939261/1‑286 (MQ=255)
                                                                                                                                 cTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTa                                                                                                                                                   <  2:1419346/289‑1 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATACAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGCTTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTaa                                                                                                                                                  >  1:323939/1‑288 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTgcgc                                                                                                                                                                                <  1:1891621/258‑1 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTgcgc                                                                                                                                                                                >  2:1891621/1‑258 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGcaca                                                                                                                                                                          <  1:1231995/264‑1 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGcaca                                                                                                                                                                          >  2:1231995/1‑264 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTaa                                                                                                                                                  >  1:1012359/1‑288 (MQ=255)
                                                                                                                                   tCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTaa                                                                                                                                                  >  1:1260638/1‑288 (MQ=255)
                                                                                                                                         aaaCTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAAtg                                                                                                                                           >  2:648777/1‑289 (MQ=255)
                                                                                                                                          aaCTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCaaa                                                                                                                                             <  2:903423/286‑1 (MQ=255)
                                                                                                                                                 ggTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAAtgggctgggc                                                                                                                                   <  1:1001934/289‑1 (MQ=255)
                                                                                                                                                       cacaAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGc                                                                                                                             >  1:1213769/1‑289 (MQ=255)
                                                                                                                                                       cacaAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGGTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGAGGCGGTAAGCAAATGGCATGGGCAACAGc                                                                                                                             >  2:930141/1‑289 (MQ=255)
                                                                                                                                                                            gcTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATg                                                                                                        <  1:1579535/289‑1 (MQ=255)
                                                                                                                                                                               gACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTggcgg                                                                                                                                                        >  2:1314173/1‑238 (MQ=255)
                                                                                                                                                                                    aTTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCg                                                                                                <  1:1536355/289‑1 (MQ=255)
                                                                                                                                                                                     ttGCTGCAACAGTGGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGAGCGCGCATCATGGCTTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCgc                                                                                               <  1:150183/289‑2 (MQ=255)
                                                                                                                                                                                     ttGCTGCAAACGTTGCCCTTTGCTGGGTTCCCCCGGACACATGACAGGAAGCGTCATGGGAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCgc                                                                                               <  2:56139/289‑2 (MQ=255)
                                                                                                                                                                                     ttGCTGAAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCgc                                                                                               <  1:1932141/289‑2 (MQ=255)
                                                                                                                                                                                      tgctgcAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACACCGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCCAATGGGCTGGGCAACAGCAACGACCCGGCCTGTTCGATCCCAAGCCg‑gg                                                                                             >  2:1369324/1‑288 (MQ=255)
                                                                                                                                                                                      tgctgcAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCgcg                                                                                              <  1:107302/289‑3 (MQ=255)
                                                                                                                                                                                      tgcgtaaacgtttGCCCTTTGAGCGTTCCCCCCGGGAACAAGACAGAAAGCGTCATGGTAGCGCGGAACGGCTCGGCCAGTTCGCGGCTCCGGGCGGTAGAGGTACAAAGCATAAACCAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTTGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCg                                                                                                <  2:951299/276‑1 (MQ=255)
                                                                                                                                                                                         tgcAACCGTTGCCCTTTGCGGGTTTCCCCCCGCAACAATACAGGAACCGTCATGGTAGCGCGAAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCgaggtg                                                                                           <  2:152862/289‑6 (MQ=255)
                                                                                                                                                                                                gTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAatg                                                                                   >  2:538401/1‑289 (MQ=255)
                                                                                                                                                                                                   gCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCAGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGACTGGCGGCTGTATGCCAATGGGCTGGGCACCAGCAACGTCGCGGCCTGTTCGATGGCAAGCCG‑CGAGGTGAAatgatg                                                                                >  2:462276/1‑289 (MQ=255)
                                                                                                                                                                                                        ttGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGAt                                                                           <  2:1348024/289‑1 (MQ=255)
                                                                                                                                                                                                        ttGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATGGCGCAGCACACAGAGTAACGACTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCGTGGTTGATGCCAAGCCGCGCGGGT‑AAATGGTGCAgg                                                                            >  2:982406/1‑287 (MQ=255)
                                                                                                                                                                                                         tGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCgatga                                                                                                                                                                                                                                                 <  2:188391/123‑1 (MQ=255)
                                                                                                                                                                                                           cTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CCAGGGGAAATGATGCAGAacg                                                                         >  1:1340134/1‑288 (MQ=255)
                                                                                                                                                                                                            tGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGAtcgt                                                                        <  1:835421/288‑1 (MQ=255)
                                                                                                                                                                                                               tttCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATcgtcgt                                                                     >  1:988842/1‑288 (MQ=255)
                                                                                                                                                                                                                 tCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTc                                                                   >  1:1884438/1‑288 (MQ=255)
                                                                                                                                                                                                                   ccccTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAaacaac                                                                                                                                                                                                                                                                      <  2:846386/92‑1 (MQ=255)
                                                                                                                                                                                                                   ccccTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTTCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACCCAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGGGAAATGATGCAGATCGTCCTTCAc                                                                 >  2:1873959/1‑288 (MQ=255)
                                                                                                                                                                                                                   ccccTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCAcc                                                                <  1:1130983/289‑2 (MQ=255)
                                                                                                                                                                                                                   ccccTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCAcc                                                                >  1:1610484/1‑288 (MQ=255)
                                                                                                                                                                                                                        gCAACAGTACAGGAAGCGTAATGGTAGCGCGGAACTGCTCGGCCAGTACGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGGCCGTTGTTAGCTTCGATGCTCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGGAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCAccgacag                                                           <  2:852989/289‑7 (MQ=255)
                                                                                                                                                                                                                         caacaaTACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCCGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACCCGGCCTGTTAGATTCCAAGGCA‑GGAGGGATAATTATGCAAATCGTCGTTCAccgacagc                                                          >  1:1601048/1‑282 (MQ=255)
                                                                                                                                                                                                                               tACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTTCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGct                                                    <  2:32157/289‑2 (MQ=255)
                                                                                                                                                                                                                               tACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAg                                                                                                                                                                                                                   <  1:1316580/131‑1 (MQ=255)
                                                                                                                                                                                                                               tACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCg                                                                                                >  2:1554307/1‑246 (MQ=255)
                                                                                                                                                                                                                                 cAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGctga                                                  >  1:1417175/1‑286 (MQ=255)
                                                                                                                                                                                                                                    gAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGct                                                    <  2:1257695/284‑2 (MQ=255)
                                                                                                                                                                                                                                      aGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAg                                                                                                                                                                                                                   <  2:1103734/124‑1 (MQ=255)
                                                                                                                                                                                                                                      aGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGCGGTGAAATGATGCAAACCCTCGTTCACCGACAGCGTTGccgaggtga                                             >  2:1639476/1‑281 (MQ=255)
                                                                                                                                                                                                                                      aGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGctgaggtg                                              <  1:405088/288‑8 (MQ=255)
                                                                                                                                                                                                                                       gCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGaa                                            >  1:905300/1‑289 (MQ=255)
                                                                                                                                                                                                                                         gTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGa                                          >  1:1159146/1‑289 (MQ=255)
                                                                                                                                                                                                                                          tCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGAt                                         >  2:430334/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  gcgcGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTa                                  >  1:1436412/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   cgcgGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCgca                                                                                                                                                                               >  1:214842/1‑147 (MQ=255)
                                                                                                                                                                                                                                                   cgcgGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCgca                                                                                                                                                                               <  2:214842/147‑1 (MQ=255)
                                                                                                                                                                                                                                                   cgcgGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTAcc                                >  2:386117/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cgGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTACCgg                              >  1:691153/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cgGAACTGCTCGGCCAGATCGCGCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGAGCTGGGCAACAGCAACGACTCGGCCTGGTCGATGCCAAGCCG‑CGAGGTGAAACGATGCAGCTCGTCGTTCACCGACAGCGGTGCTGAGGTGAAGTTCCAGCTACCgg                              >  1:422767/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      atggcgaATCATGGCGTGGGAGGTACAAAGAAAAAAAGACCGACCGTTGTGAGCTTCGAGGATCGGTCGCGGCATGGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACGGAGTAACGCCTGGGGGCTGTAGTCAAATGGGCGGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTACCGGGTTTTTGCGCCATTaa              <  2:1588636/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                      accgcgCATCATGGCGTGCGAGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGTGAAATGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTACCGGGTTTTTGCGCCATTaa              <  1:361072/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tCGCGCACCATGGAGGGCGGGGAATAAACCATAAAGCAACGGCCGTTGTTAGCTGTGATGGTCGGTCGCAGAGGTGCCGCTAACTGGCGAGCAGAACCGGGCTGGTTGGTTTGCGGCAGATGGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCGACGACTCGGCCTGTTCGATGCCAAGCCG‑CGAGGGTAAAGGATGCAGATCGTCGTTCACCGACAGCGTTGCTGAGGTGAAGATCCAGCTACCGGGTTTTTGCGCCATTaa              <  2:1299809/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
CATCGAACGGGTCGCCACCGCGCAAACGACAATCTTCCATGCGCGCTTTTAACAGTGGATCATCCGGGCTGGTAAACGGCAATTTGTCGATAATTACCAAACTCAATGTATCGCCACGCACGTCCACCCCTTCCCAGAAACTGCTGGTTGCCACAAGAAGCGCATTACCGGCGCTGACAAATTGCTGCAACAGTTGCCCTTTGCTGGTTTCCCCCTGCAACAATACAGGAAGCGTCATGGTAGCGCGGAACTGCTCGGCCAGATCGCGCATCATGGCGTGGCTGGTACAAAGCATAAAACAACGACCGTTGTTAGCTTCGATGATCGGTCGCAGCATTGCCGCTAACTGGCGAGCAGAACCTGGCTGGTTGGTTTGCGGCAGATTGCGCAGCACACAGAGTAACGCCTGGCGGCTGTAATCAAATGGGCTGGGCAACAGCAAGCTCTCGGCCTGTTCGATGCCAAGCCG‑GCTGGTGAAATGATGCAGATCGTCGTTCACGCTCAGCGTTGCACTGGTGAAGATCCAGCTACCGGGTTTTTGCGCCATTAACTCTTTGAATTT  >  CP042583/1572200‑1572761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A