Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,592,229 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,592,229 | 0 | A | T | 99.0%
| 473.3
/ NA
| 208 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (102/102); minor base C (2/0); total (106/102) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,592,230 | 0 | G | C | 99.5%
| 482.9
/ NA
| 208 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (105/101); total (106/102) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,592,231 | 0 | C | G | 99.5%
| 487.2
/ NA
| 208 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (105/101); total (106/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 208 total aligned reads displayed.
GGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGAGTCCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGAGTCCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCAGCCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑GCTTTTGCTCTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGC > CP042583/1591949‑1592509
|||
ggCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTACATCAGTTTCGAGATAATGGTACACCCGTCTCGCTGATg > 2:1682259/1‑289 (MQ=255)
gttCATCATGGTTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTAtt < 1:438351/289‑1 (MQ=255)
gttCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCACTAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTATGAACGGCTCGTCTCCTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGCGATAATCGTACCGACGTCCCGCTTATGGCTGCGGCGAt > 2:1388937/1‑288 (MQ=255)
catcatGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTg < 1:1642727/289‑1 (MQ=255)
cTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCTGCGCTGGTGGCGCTGATGCTCAATCAGGTTGGAGATAATGGTACACACGGCTCGCTGCTTGCCGCGGCTATTCTGGCCGTGAt > 2:939883/1‑289 (MQ=255)
tGCGGCGGTTTTTTTCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGACTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGAt < 2:1538650/288‑1 (MQ=255)
gCGGTGCTGTTTTCCCTGGTTCTGCTGCCCTCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtg < 1:1451518/289‑1 (MQ=255)
cGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCCCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGATGATGCTAAATCAGTTTGGAGATAATGGTACAAACGTGCTGCTGATGGCCGGGGCAATTCTGGCAGTGATtgc > 2:501036/1‑289 (MQ=255)
gggCTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGTATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCATCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATtgct < 2:664296/288‑1 (MQ=255)
cTTTTTTCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGcc < 1:1010126/288‑1 (MQ=255)
ttttCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCtgtg > 1:542666/1‑289 (MQ=255)
tCCCTGGTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCa < 1:1320225/289‑1 (MQ=255)
ggTTCTGCTGCCCGCGTCACCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGt < 1:586439/289‑1 (MQ=255)
tgctgctgCCCGCGTCACCTGAGGATATCAATATTATCTGTCCGATGAGCTTATGTGGTGCTGCAGTTGGCTTATTCCACTCACCCAATAACCACACCATTTTTCCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGttt < 2:48644/287‑1 (MQ=255)
cgcgtcaccTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACt < 1:1060387/282‑1 (MQ=255)
cgcgtcaccTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACt < 2:1226834/282‑1 (MQ=255)
accTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCa < 2:595036/288‑1 (MQ=255)
cGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTg < 2:1076264/228‑1 (MQ=255)
atCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGc < 2:1484877/227‑1 (MQ=255)
tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCa > 1:595742/1‑269 (MQ=255)
tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATaaaaaaa < 1:1682259/289‑1 (MQ=255)
tCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGGACACACGTCTCGCCGATGGCTGCGGCTATTCTGGCAGTTATTGCTGCCTGTGTCA‑GTGGTTTTCGTATCACTCCGCCCCGATCCAGGGGCTaaaaaaa > 2:680008/1‑289 (MQ=255)
ccGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGc‑gcg > 1:116675/1‑289 (MQ=255)
tgatCTTATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACTTCTCGCTGATGGCTGCGGCTATTCTGGCAGGGATTGCTGCCTGTGTCC‑GTGGTTTACGTTTCACTCAGCCACGATCCAGGGCCTAAAAAAAAC‑GCTTcca > 2:1116505/1‑287 (MQ=255)
tATGTGGTGCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGACCCAGGGCATAAAAAAAAG‑CCGTCGATTAgg > 2:212833/1‑288 (MQ=255)
ggtgCTGGATTTGGCTTATTCCAGTCACCCAATACCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGCACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:1177460/288‑1 (MQ=255)
ggtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:109755/288‑1 (MQ=255)
ggtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGAcgcg < 1:390500/288‑1 (MQ=255)
gtgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCt > 1:1019330/1‑289 (MQ=255)
tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCa > 1:660741/1‑205 (MQ=255)
tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCAATCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtt > 1:992915/1‑289 (MQ=255)
tgCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAACGGTACACACGTCTCGCTGATGGCTGCGGCTATTCCGGCAGTGATTGCTGCCTGTGTCA‑GTGGCTTGCGTATCACTCAGCCACGCACCAGGGGCTAAAACAAGCGGCGT‑GGTCCGGACGCGCtt > 2:1322562/1‑289 (MQ=255)
gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCCCTCCGCCCCGATCCGGGGCCAAAAAAAAGC‑GCGTCGATCAGGACGCGCt > 2:1189088/1‑287 (MQ=255)
gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCttt > 2:1587555/1‑289 (MQ=255)
gCTGGATTTGGCTTATTCCAGTCACCCAATAACCACAACATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCCCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGAGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCCATCCTGGCAGTGGTTGCCGCTTG‑GTCACGTGGTTTCCGTATCACTCAGCCACGACCCAGGGCATATAACAAGC‑GCGGCGATCAGGGCGAGCttt > 2:607066/1‑289 (MQ=255)
tGGATTTGGCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGTGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt < 1:51788/288‑1 (MQ=255)
tGGCTTATTCCAGTCACACAATAACCCCACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCACAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAtt < 1:112703/289‑1 (MQ=255)
ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAttt > 1:1840372/1‑289 (MQ=255)
ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTAttt > 1:367518/1‑289 (MQ=255)
ggCTTATTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGACACGATCCAGCGCATAAAAAAATC‑GCGTCGAACAGGACGCGCTTTGTCGCAttt > 2:507800/1‑289 (MQ=255)
aTTCCAGTCACCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTc > 1:858163/1‑289 (MQ=255)
ccagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCata < 2:542666/282‑1 (MQ=255)
cagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 2:858163/283‑1 (MQ=255)
cagtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 1:1214819/283‑1 (MQ=255)
gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCCGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATAtt > 1:503006/5‑288 (MQ=255)
gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAg > 2:1787233/5‑223 (MQ=255)
gtcacccAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAACCAGGCCATAAAAAAAGC‑GCCTCGATCAGGACGCGCTTTTTAGTATTTACTTCATAttt > 2:643804/5‑288 (MQ=255)
accAATAACCACCCCATTGTTACCTCCGCGCCTCGCGACGGTGGCGGTGGACGCAGTGGCATGTTAGGAACGGCTCGTTTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTTGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTc < 2:1596254/288‑1 (MQ=255)
accaccCCATTAGTACCGCCGCGCCTCGCGAACGTGGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 2:1631573/289‑1 (MQ=255)
aCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGAACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 1:285852/289‑1 (MQ=255)
aCCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGATGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTAtt < 1:1656880/289‑1 (MQ=255)
cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGc > 2:1847664/1‑168 (MQ=255)
cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat > 1:9283/1‑272 (MQ=255)
cacCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAGCCAGGGCATAAAAAAAGC‑GCGGCGATCAGGACGCGCTTTTTAGTGTTTACTTCATATTACTTCAGGTATTCAc > 2:453432/1‑288 (MQ=255)
cATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGACCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCatat < 1:1441139/269‑1 (MQ=255)
ttattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTc > 2:428204/1‑201 (MQ=255)
ttattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTc < 1:428204/201‑1 (MQ=255)
tattcCCTCCGCGCCTCGCGAACGGAGCGGTGGAGGCGGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCGGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACg < 2:1304911/289‑1 (MQ=255)
tattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTAc > 1:592188/1‑288 (MQ=255)
tattaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTAc > 1:1827419/1‑288 (MQ=255)
ttaCCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCa < 1:262434/289‑1 (MQ=255)
cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATcc < 1:1948265/202‑1 (MQ=255)
cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGCACAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTc > 2:669925/1‑289 (MQ=255)
cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTc > 2:290560/1‑289 (MQ=255)
cgcgCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGCAA‑GTGGTTTATGTATAACTCAGCCACGCTCCAGGCCATAAAAAAAGC‑CCTTCGATCAGGCCTGGCATTTTAGTATTTAATCCAGATTTCTTCAGGTATTCACCCGTACGccatacgt > 2:1642150/1‑281 (MQ=255)
gcgcCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACTATCCAGGGCAT‑AAAAAAGC‑GCGTCGATCAGGATCCGCTCTTGACGACTTACTTTATTCTCCGTCAGGTATTCCTCCGTAccgcactcttcat > 2:1893267/1‑277 (MQ=255)
cgcgAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGt > 1:1583109/1‑289 (MQ=255)
tAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGAACCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTGCATATTACTTCATGTATTCACCCGTTCGCAGAGCTTCACTTCGTTTATCCa > 1:48477/1‑288 (MQ=255)
aGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGGTTACGTAGCACTCAGTCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTCGCATTGACTTCATATTACTTCAGGTATTCACCCGTCCGCAGTGTTTTAATTCGTTTATCAAGCGGCTGGTGGGTc > 2:312107/1‑289 (MQ=255)
tGGCATGTTAGGAGCGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCAt > 1:41963/1‑289 (MQ=255)
ggCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTc < 1:290560/286‑1 (MQ=255)
tGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGaaca > 2:776131/1‑289 (MQ=255)
tAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCCGGACGCGCTTTTTAGTATTTCCTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCGTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGaacaac > 2:1927761/1‑288 (MQ=255)
cGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGGTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑a < 1:1388937/289‑1 (MQ=255)
cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcg > 1:1220598/1‑287 (MQ=255)
cTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcg > 1:162154/1‑287 (MQ=255)
gggTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcgatttcgactt < 2:1720945/289‑13 (MQ=255)
ggcgcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCa < 1:155550/288‑1 (MQ=255)
gcggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCagaga < 1:670408/289‑1 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt > 1:1417385/1‑166 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCtttt < 2:1417385/166‑1 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCata < 1:787251/182‑1 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCCTGAACAACTCACTG‑A‑G‑CCATTTCGACTTACCGTTAATGCcgaga > 1:410555/1‑288 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCCCCGCA‑C‑GATTTTG‑TCTTACCGTTTATGCaggtat > 2:331086/1‑285 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑gcgatttcgactt < 2:1039516/272‑13 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGTTTTCGACTTACCGTTAATGCagaga > 2:915690/1‑288 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTATCGTTAATGCagaga > 1:255872/1‑288 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAAATCGTTTATCCAGCGGCGGGTGGGTCATGAACAACACACGG‑ACC‑GATTTTG‑ACTTACCGTTAATGCataga > 2:834015/1‑288 (MQ=255)
cggcgcTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACCCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCAGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑C‑G‑CGTTTTACACTTACCGTTAATGCagaga > 2:1707881/1‑288 (MQ=255)
gcTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTT‑A‑G‑CCATTTCGCCTTACCGGTAATg > 2:28105/1‑269 (MQ=255)
aTGCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGct > 1:1232614/1‑289 (MQ=255)
cgCTAAATCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCAGCATCCACGGCATAAAAAAAGC‑GCGTCGAGCAGGAAGCGCTTTTTAGTATTTACTTCATATTACTTCAGGGATGCGCCCGTACTCAGAGCTTCAATTCGTTTAACCAGCGGCGGGTGGGCTGTGAACAATCCAATG‑A‑T‑GGTATTCGGCTTCGCGTTAATGCAGAAGCCCCTCATGCTTGTTCct > 2:721715/2‑288 (MQ=255)
aaaTCATTTTGGGGGAAATGGTGCACACGTCTCGGTGATGGCTGCGGCTATTATGGCAGTGATTGCTGCCTGGGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 2:41963/289‑1 (MQ=255)
aaaTCAGTTTGGAGATAATGGTACCCACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 1:1189088/289‑1 (MQ=255)
aaaTCAGTTTGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTg < 1:212833/289‑1 (MQ=255)
ttGGAGATAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTTTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGTGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGCGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCCTGAACAACTCACTG‑C‑GCGCATTCGC‑CTTACCGTTAATTCAGATCGCCATTATGCTGGTTTCTTCTTGCgtgttat > 2:1575699/1‑283 (MQ=255)
agaTAATGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCGGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGc < 2:116675/288‑1 (MQ=255)
aTGGTACACACGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGttt > 1:682109/1‑289 (MQ=255)
acacacGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAgg < 2:378196/289‑1 (MQ=255)
cacacGTCTCGCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑CGATTTCGACTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGgc > 1:1767090/1‑289 (MQ=255)
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GGCTTTAGGGTTGTTCATCATGGCTGCGGGGCTTTTTTCCCTGGTTCTGCTGCCCGCGAGTCCTGCGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGATTTGGCTTATTCCAGAGTCCCAATAACCACACCATTATTACCTCCGCGCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATGTTAGGAACGGCTCGTCTACTGGGTCAGAGTAGCGGCGCGGCGCTGGTGGCGCTGATGCTAAATCAGTTTGGAGATAATGGTACACACGTCAGCCTGATGGCTGCGGCTATTCTGGCAGTGATTGCTGCCTGTGTCA‑GTGGTTTACGTATCACTCAGCCACGATCCAGGGCATAAAAAAAGC‑GCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAATTCGTTTATCCAGCGGCGGGTGGGTCATGAACAACTCACTG‑A‑G‑GCTTTTGCTCTTACCGTTAATGCAGAGAGCCATCATGCTGGTTGCTTCTTGCGGTTCATAGCTGGTTTTCAGGC > CP042583/1591949‑1592509
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
