Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,605,362 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,605,362 | 0 | G | C | 100.0%
| 606.7
/ NA
| 255 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (140/115); total (140/115) |
| * | CP042583 | 1,605,363 | 0 | C | G | 99.6%
| 604.2
/ NA
| 255 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (139/115); total (140/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,605,364 | 0 | T | A | 99.2%
| 601.0
/ NA
| 255 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (139/114); minor base G (1/1); total (140/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 255 total aligned reads displayed.
GTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACGCTAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAAGC > CP042583/1605090‑1605636
|||
gTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGt < 1:1827575/289‑1 (MQ=255)
tCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTc > 1:1418723/1‑289 (MQ=255)
tCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTATCGTTTTATGCCCTTCCACCGAAACAACATGCCAGTc > 2:105748/1‑289 (MQ=255)
tCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACg > 1:507330/1‑289 (MQ=255)
tCCCATCAACCCGCCCTGTACGCCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAACCGACGAATCGTCAAGGGGGCCAGTCAGCCACCGTCCATTGCTAAGCCAAATACCAACATCAGCCATGTGAAACGTACCACTCGCAGCGCGAACCCTGTTAACGCACACACGATTTGTTTCCCGCTAAAGTGGTTGCGTCCCTTCGTTTAAGGCCCGTCCACCGAACCAACACGCAAGTCACCGGTGTAg > 2:1009493/1‑289 (MQ=255)
aTCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCCTGATTTATTTCAAGCTAAAGGTGTAGTGTCCTTGCGTTTTATGCCCGTCCACCCAAACAACATGCCAGTCAACGGTGTAGGtc > 2:1125702/1‑287 (MQ=255)
gCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTc > 1:1725027/1‑289 (MQ=255)
gCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTc > 1:1515113/1‑289 (MQ=255)
cccTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGgtgt < 2:373522/274‑1 (MQ=255)
gCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCa > 1:1727145/1‑289 (MQ=255)
gCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCa > 1:193208/1‑289 (MQ=255)
cTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGGGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGtt > 1:679607/1‑289 (MQ=255)
aggaccAAAGTCCAGACGGCTGGAGGCAGTTGGAAACGCGGAAAACGCTTAGCCAGCAAGCAACGAATCGTCAAGGTGGCCAGCCATGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCGTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGtt < 2:542961/284‑1 (MQ=255)
aTCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCCAGGGGGCCAGCCCGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGCTTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCCCCGGAACAACATGCCAGTCAAGGGTGTCGGTTCCGGGTTTCAGTGACTCGGCCCGTGGCACAATCAGTTGCt > 2:1706021/1‑289 (MQ=255)
aGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGGGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTGCCGGGTTTCAGCGAATCGGCCAGTGGAACCATCAGTTGCGTTTGTTCCt > 2:1051836/1‑288 (MQ=255)
aGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTAGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGGTTCAGCGAATCGGCCAGTGGAACAATCGGTTGCGTTGGGTCCTg > 2:625993/1‑289 (MQ=255)
aGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCaa < 1:83277/221‑1 (MQ=255)
aGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCaa > 2:83277/1‑221 (MQ=255)
cGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAacaaca > 1:872774/1‑209 (MQ=255)
cGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑c > 1:609436/1‑288 (MQ=255)
tgttgtAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑cgcttc < 1:1469467/288‑1 (MQ=255)
tgttgtAAACGCAGAAAACGCTTCGCCAGCAAGCAACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑cgcttc < 2:772361/288‑1 (MQ=255)
gttgtAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑cgcttcgc < 2:901165/289‑1 (MQ=255)
ttgtAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGcc > 1:272967/1‑289 (MQ=255)
gtAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCgg > 2:743804/1‑289 (MQ=255)
tAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAgcgaat > 1:443106/1‑231 (MQ=255)
aaaCGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTa < 2:1727145/289‑1 (MQ=255)
aaCGCAAAAAAGACTTGGCCAGCAAGGGACGAAACGTCAAGGGGGCCAGGCATGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCCGCTTCGCCGGTa < 2:1923606/289‑1 (MQ=255)
aGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCGTTTGCTTTTGGTCTTGCTCATTT‑CGCTTCGCCGTTAATGttt > 2:325823/1‑289 (MQ=255)
aGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGttt > 2:1436037/1‑289 (MQ=255)
aGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGttt > 1:1605154/1‑289 (MQ=255)
gCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGttttt > 1:1680070/1‑289 (MQ=255)
cAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGtttttt > 2:1869381/1‑289 (MQ=255)
gaATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGt < 2:1473056/289‑1 (MQ=255)
aTCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGa > 1:1877956/1‑289 (MQ=255)
aaaggggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTg < 1:1476178/286‑1 (MQ=255)
aaGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTg < 2:268592/289‑1 (MQ=255)
ggggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca < 2:1418723/288‑1 (MQ=255)
gggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca < 1:319423/287‑1 (MQ=255)
gccagccaGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGcacc > 2:1530373/1‑287 (MQ=255)
cagGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATc < 1:766137/289‑1 (MQ=255)
cACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATcc < 1:1385232/286‑1 (MQ=255)
cACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATcc < 2:130224/286‑1 (MQ=255)
cACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCGTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAACGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCATTTAATCCttt > 2:1068388/1‑287 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCg < 1:598636/246‑1 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCg > 2:598636/1‑246 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTTATTTTTTCACCATTGCATCCTGTTTCaa > 2:1391372/1‑289 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACt > 1:1587004/1‑275 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACt < 2:1587004/275‑1 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCa > 1:263757/1‑288 (MQ=255)
tACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGGAATGTTTTAATATTTTCGTTTTTTGGCCACGTGATTTTTGCACCCCTGAATCCTGGTTCa > 1:1002104/1‑288 (MQ=255)
ttGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATTGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATTTTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAaca > 2:215193/1‑287 (MQ=255)
gAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑cgctt > 2:1184701/1‑213 (MQ=255)
gAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATtt‑cgctt < 1:1184701/213‑1 (MQ=255)
gAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTcc > 1:1438236/1‑288 (MQ=255)
aGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga > 2:489745/1‑286 (MQ=255)
aGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga < 1:839697/289‑4 (MQ=255)
aGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga > 1:72873/1‑286 (MQ=255)
aGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga > 2:110684/1‑286 (MQ=255)
cAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccgag < 1:350412/287‑5 (MQ=255)
acaCCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGtt < 2:21088/287‑1 (MQ=255)
atcagcgaggTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGa < 1:295786/281‑1 (MQ=255)
gaggTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGc < 1:1051836/285‑1 (MQ=255)
gTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCg > 1:1392137/1‑289 (MQ=255)
aaaTGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGt > 1:1810820/1‑288 (MQ=255)
aaTGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTg < 1:1530373/288‑1 (MQ=255)
tCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACt < 1:200834/289‑1 (MQ=255)
aGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTTAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTgc > 2:1318517/1‑288 (MQ=255)
tCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGTAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGTCCCGTGATTTTTGCACCACTGAATcc < 1:1135571/223‑1 (MQ=255)
tCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTg < 1:1893928/288‑1 (MQ=255)
tCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGc < 2:1140584/289‑1 (MQ=255)
cAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCg < 1:312620/289‑1 (MQ=255)
ggTCAACGCCAGCCTGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCa < 2:456419/289‑1 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTTCACCACTGAATCCTGTTTCAACACATTCCGAGAAGTTTAAAGTGATTGCCTGTGGTGCACCTTTCACTTTCGCTTTTGCCGCAGAATa > 2:1893928/1‑288 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca < 2:844041/202‑1 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGACGTTTAACGTGATTGCCTGCGTTGCAGCTGTCATTTGCGCGTTTGCCGAAggct > 2:1359168/1‑285 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGa > 2:1454569/1‑286 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 2:1768358/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 1:562109/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 1:1159351/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 2:318154/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 1:128372/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 2:431399/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 1:212477/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGAt > 1:1113140/1‑287 (MQ=255)
cGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATAc > 2:723003/1‑289 (MQ=255)
cAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGa < 1:1308330/289‑1 (MQ=255)
gCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGAt > 2:877344/1‑288 (MQ=255)
aCGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCAt < 1:1058562/289‑1 (MQ=255)
aCGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCAACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCAt < 1:1768106/289‑1 (MQ=255)
aaaGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGcc < 1:754957/289‑1 (MQ=255)
gtgtCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGTGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCCCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGTTTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAATTGATTGCCTGCGGTGCAGCTTTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATTCGCAtgtgacacgccggaa > 2:780828/1‑278 (MQ=255)
ccTTTCGTTGTATGCCCGTCAACCGAAACAACATGCAAGTCAACGGTGAAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCTTGCTCCTTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTAAGTCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTTCAGCTGt > 1:994597/1‑227 (MQ=255)
cTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTg < 2:925381/240‑1 (MQ=255)
cTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTg > 1:925381/1‑240 (MQ=255)
cTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGgtgt < 1:100038/289‑1 (MQ=255)
tttCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAac > 1:1564083/1‑183 (MQ=255)
tttCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAac < 2:1564083/183‑1 (MQ=255)
tttCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTc > 1:628760/1‑289 (MQ=255)
ttATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCaacg < 1:908460/289‑3 (MQ=255)
|||
GTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACGCTAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTT‑CGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAAGC > CP042583/1605090‑1605636
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
