Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,608,263 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,608,2630GC100.0% 691.1 / NA 289intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (152/137);  total (152/137)
*CP0425831,608,2640CG100.0% 684.4 / NA 289intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (152/137);  total (152/137)
*CP0425831,608,2650TA99.3% 686.3 / NA 289intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (151/136);  minor base C (1/1);  total (152/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 289 total aligned reads displayed.

AGGCTAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAAGCTAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAA  >  CP042583/1607985‑1608541
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
agcgaaGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGGAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCACCGAAACCGGaa                                                                                                                                                                                                                                                                              >  2:124438/6‑289 (MQ=255)
agcgaaGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGa                                                                                                                                                                                                                                                                               >  2:655541/6‑288 (MQ=255)
agcgaaGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGCGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGa                                                                                                                                                                                                                                                                               >  1:276824/6‑288 (MQ=255)
  cgaaGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACt                                                                                                                                                                                                                                                                            >  1:1457338/4‑289 (MQ=255)
  cgaaGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACt                                                                                                                                                                                                                                                                            >  1:1240706/4‑289 (MQ=255)
     aGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCg                                                                                                                                                                                                                                                                         >  1:943182/1‑289 (MQ=255)
        agagCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGAc                                                                                                                                                                                                                                                                       <  2:195918/288‑1 (MQ=255)
               tAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCTAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGGCGCCAACa                                                                                                                                                                                                                                                                >  2:1099151/1‑288 (MQ=255)
                aGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACg                                                                                                                                                                                                                                                              >  1:1372165/1‑289 (MQ=255)
                 gCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACgg                                                                                                                                                                                                                                                             >  1:259450/1‑289 (MQ=255)
                 gCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACgg                                                                                                                                                                                                                                                             >  1:1765810/1‑289 (MQ=255)
                  cccAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACggg                                                                                                                                                                                                                                                            <  1:784131/289‑1 (MQ=255)
                       ttttAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACt                                                                                                                                                                                                                                                       >  1:203864/1‑289 (MQ=255)
                        ttttACAATGAATCGCAGGCATCAAGAAAATCATTAAACGTATTTTTCTTCTTCAGAAATTTACCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACt                                                                                                                                                                                                                                                       <  1:1718771/288‑1 (MQ=255)
                        tttAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGa                                                                                                                                                                                                                                                         <  1:471027/286‑1 (MQ=255)
                        tttAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGa                                                                                                                                                                                                                                                         <  2:175721/286‑1 (MQ=255)
                        tttAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCACACCACCGCCGCGAACATGGACAATTGGGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATTGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGa                                                                                                                                                                                                                                                         <  1:1801581/286‑1 (MQ=255)
                            aCAATGCATCGCAGGCATCAAGATCATCACTAAACGTATCTTTCGTCTTCAGAAATTTTCCGTCTTCGTACCATTATTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGTCAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCATCGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCca                                                                                                                                                                                                                                                  <  1:1791934/289‑1 (MQ=255)
                            aCAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTTCGAAAATGTTTGCGATGGTAGATCAACGAAACCGGAACTTCGACGCCATAACCGGACACTAccc                                                                                                                                                                                                                                                   >  2:1661445/1‑288 (MQ=255)
                            aCAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCca                                                                                                                                                                                                                                                  <  1:1645779/289‑1 (MQ=255)
                                tGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATAACGGGCGACTATCCACAgt                                                                                                                                                                                                                                              >  1:1915093/1‑288 (MQ=255)
                                 gCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGgt                                                                                                                                                                                                                                             >  2:1613222/1‑289 (MQ=255)
                                     cGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAAACGGAACTTCGTCGCAATCAGGGGCGACTATCCACAGGTGtt                                                                                                                                                                                                                                          >  2:795541/1‑288 (MQ=255)
                                            aTCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTATTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGGAGAAAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACAATAGCCATACACCAGCAACGGGTTGTGTACTTTGCGAAAATGTATGCGATGGTAGACCAACGAAAACGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTAACTGCgg                                                                                                                                                                                                                                  >  1:1141920/1‑289 (MQ=255)
                                                    aaTCATTAAACGTATTTGTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTcgc                                                                                                                                                                                                                          <  1:1661445/289‑1 (MQ=255)
                                                      tCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTATACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATACACAGGTGTTAACTGCGGTAATCcgcc                                                                                                                                                                                                                         >  2:825114/1‑288 (MQ=255)
                                                                 aTTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCa                                                                                                                                                                                                             >  2:954207/1‑289 (MQ=255)
                                                                        ttcttcAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACt                                                                                                                                                                                                       >  1:516278/1‑288 (MQ=255)
                                                                             cAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCgtt                                                                                                                                                                                                 <  1:957098/289‑1 (MQ=255)
                                                                             cAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCAATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCgtt                                                                                                                                                                                                 >  2:1732520/1‑289 (MQ=255)
                                                                                     ttCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTaa                                                                                                                                                                                         >  1:1201578/1‑289 (MQ=255)
                                                                                              cGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCAc                                                                                                                                                                                                                                       >  1:1014775/1‑234 (MQ=255)
                                                                                                     tttttgACCCACCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCg                                                                                                                                                                         <  2:1858487/286‑1 (MQ=255)
                                                                                                      tgttgCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCGAGCTGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCgg                                                                                                                                                                        <  1:1877934/289‑1 (MQ=255)
                                                                                                      tgttgCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCg                                                                                                                                                                         <  2:1463933/288‑1 (MQ=255)
                                                                                                        ttgCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACg                                                                                                                                                                                                                                                                      >  1:605207/1‑193 (MQ=255)
                                                                                                        ttgCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACg                                                                                                                                                                                                                                                                      <  2:605207/193‑1 (MQ=255)
                                                                                                           ccccAGCCAACCCCCGCCGCAAACATGGACAATGGCATAGACAAGGCCACGATCTAACAAACTCAAGCGACTAAAACTGAAATCGGCATAAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGtatcc                                                                                                                                                                   <  2:1395271/289‑1 (MQ=255)
                                                                                                               aGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCgg                                                                                                                                                                                                                                                                                >  2:327354/1‑176 (MQ=255)
                                                                                                               aGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACacgacg                                                                                                                                                                                <  1:1664519/272‑1 (MQ=255)
                                                                                                                gCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGCCCCTCACCGGtatccataa                                                                                                                                                               >  2:1037777/1‑287 (MQ=255)
                                                                                                                gCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGtatccatat                                                                                                                                                               >  1:432042/1‑288 (MQ=255)
                                                                                                                gCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGtatccatat                                                                                                                                                               >  1:354343/1‑288 (MQ=255)
                                                                                                                    accaccGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCa                                                                                                                                                                                                                                                                   >  1:418259/1‑184 (MQ=255)
                                                                                                                     ccaccGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTACGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGt                                                                                                                                                          >  1:1428989/1‑288 (MQ=255)
                                                                                                                           ccgcGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTcaaaca                                                                                                                                                   >  2:41563/1‑289 (MQ=255)
                                                                                                                             gcgcaaaTGGACAATGGCTGAGACAAAGCCACGATCTAACAAACGCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCCACGGGTTGTGTCCTTTGCGAAAATGTTTGGGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTcaaacaaa                                                                                                                                                 <  2:314124/283‑1 (MQ=255)
                                                                                                                                 aCATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAgtgt                                                                                                                                             <  1:795541/289‑1 (MQ=255)
                                                                                                                                  cATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTc                                                                                                                                            <  1:1089584/289‑1 (MQ=255)
                                                                                                                                        cAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGgtgt                                                                                                                                      <  1:1732520/289‑1 (MQ=255)
                                                                                                                                           tGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTACTTCGCCGCCTAAAACCCAGGAACTTACGTTTGTTTTAATCCCCTACGCTCAACGGTCTCCATATCCAGTTCAAACAACGGTTCTGGTGTAg                                                                                                                                    >  2:1377445/1‑288 (MQ=255)
                                                                                                                                           tGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAACACCAGGACCTCCCGTTTGTTTTTATACACGACGCTCCACGGTAACCATCTCCAGATCAAACAAAATGTCTGgttgag                                                                                                                                    >  2:1192542/1‑284 (MQ=255)
                                                                                                                                           tGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTcaaac                                                                                                                                                    >  2:732801/1‑272 (MQ=255)
                                                                                                                                           tGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTcaaac                                                                                                                                                    <  1:732801/272‑1 (MQ=255)
                                                                                                                                             gCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCa                                                                                                                                 >  2:553333/1‑289 (MQ=255)
                                                                                                                                              cGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCGGGAACTTCCGTTTGTTGTAATAAACGACGCTCACCGGTATCCATATCCAGTTCAAACATAGTGTCCGGTGTAATCAt                                                                                                                                >  1:832867/1‑289 (MQ=255)
                                                                                                                                              cGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGtatccatatc                                                                                                                                                              <  1:375355/259‑1 (MQ=255)
                                                                                                                                              cGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGtatccatatc                                                                                                                                                              >  2:375355/1‑259 (MQ=255)
                                                                                                                                                 aGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATgg                                                                                                                              <  1:1259249/288‑1 (MQ=255)
                                                                                                                                                 aGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTATACGCAATCACGGGCGACTATCAACAGGTGTTCACTGCGGTAATCCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCCCCGTACTACATAGCCATTTCAAACAAAATACCAGGTGTAGTCTTgca                                                                                                                             >  2:1518026/1‑287 (MQ=255)
                                                                                                                                                  gACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGgaa                                                                                                                            >  2:1369089/1‑289 (MQ=255)
                                                                                                                                                      aaGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAAt                                                                                                                        <  1:1387836/289‑1 (MQ=255)
                                                                                                                                                       aGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCgg                                                                                                                                                                        >  1:1332272/1‑240 (MQ=255)
                                                                                                                                                       aGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCgg                                                                                                                                                                        <  2:1332272/240‑1 (MQ=255)
                                                                                                                                                        gCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCACGGAAGAATa                                                                                                                       >  1:31769/1‑288 (MQ=255)
                                                                                                                                                        gCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACAGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATa                                                                                                                       >  1:1826495/1‑288 (MQ=255)
                                                                                                                                                             gATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATa                                                                                                                 >  1:1619460/1‑289 (MQ=255)
                                                                                                                                                               tCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCgg                                                                                                                                                                        <  2:783178/232‑1 (MQ=255)
                                                                                                                                                                        ctagaggggatAAAAGAGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCTAACACCAGCAACGGTTTGTGTCCTTTGCGAAGAGGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATcgcg                                                                                                      <  2:1826495/279‑1 (MQ=255)
                                                                                                                                                                        ccacaGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGAAAAAACCATAGCCATACCCCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGATGTAGTCATGGAAGAATAACCATAACGCAATcgcg                                                                                                      <  2:259450/285‑1 (MQ=255)
                                                                                                                                                                        cTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATcgcg                                                                                                      <  2:666877/289‑1 (MQ=255)
                                                                                                                                                                        cTCAAGCAGATAAAACAGAAATCGGCATCAATAATTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCTGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATcgcg                                                                                                      <  2:727670/289‑1 (MQ=255)
                                                                                                                                                                         tCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACg                                                                                                                                                                                                                                                              >  1:984066/1‑136 (MQ=255)
                                                                                                                                                                         tCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATcgcgc                                                                                                     >  1:1402739/1‑289 (MQ=255)
                                                                                                                                                                         tCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATcgcgc                                                                                                     >  1:408165/1‑289 (MQ=255)
                                                                                                                                                                               ggCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTc                                                                                               <  2:1792759/289‑1 (MQ=255)
                                                                                                                                                                                    aaaCTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGtt                                                                                          <  2:695149/289‑1 (MQ=255)
                                                                                                                                                                                                    cAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCACACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAAt                                                                          <  1:900773/289‑1 (MQ=255)
                                                                                                                                                                                                        aCTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAg                                                                      <  1:1037777/289‑1 (MQ=255)
                                                                                                                                                                                                        aCTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAg                                                                      <  2:1587129/289‑1 (MQ=255)
                                                                                                                                                                                                         cTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAgg                                                                     <  1:553333/289‑1 (MQ=255)
                                                                                                                                                                                                            gcgcCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTc                                                                   >  1:1740080/1‑288 (MQ=255)
                                                                                                                                                                                                             cgcCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTcac                                                                 >  1:1170868/1‑289 (MQ=255)
                                                                                                                                                                                                               ccGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACAt                                                               >  2:1155432/1‑289 (MQ=255)
                                                                                                                                                                                                                  tAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATg                                                                                                                               <  2:433418/222‑1 (MQ=255)
                                                                                                                                                                                                                       aCCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGa                                                       <  2:493366/289‑1 (MQ=255)
                                                                                                                                                                                                                            aGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGatcatc                                                  <  1:720737/289‑1 (MQ=255)
                                                                                                                                                                                                                                aTACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGc                                                                             >  2:6432/1‑258 (MQ=255)
                                                                                                                                                                                                                                aTACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGc                                                                             <  1:6432/258‑1 (MQ=255)
                                                                                                                                                                                                                                   cacccgatgcGGGTTGTGTCATTTGCGAGAATGTGTGCGATGGGAGACCAACGCAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCa                                           <  2:1703281/280‑1 (MQ=255)
                                                                                                                                                                                                                                        gCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAAt                                                                                                                        <  1:22304/207‑1 (MQ=255)
                                                                                                                                                                                                                                        gCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAAt                                                                                                                        >  2:22304/1‑207 (MQ=255)
                                                                                                                                                                                                                                        gCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATAcc                                      >  1:680992/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATAcc                                      >  1:703647/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGCAGGCAATCCAGGTCAAATAGGCCGGAACATCAAAGGCAACAcc                                      >  2:1908596/1‑289 (MQ=255)
                                                                                                                                                                                                                                                ttGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCa                                           >  1:868057/1‑276 (MQ=255)
                                                                                                                                                                                                                                                ttGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCa                                           <  2:868057/276‑1 (MQ=255)
                                                                                                                                                                                                                                                        tttGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCAc                                                                                                                                                                           <  1:1564760/140‑1 (MQ=255)
                                                                                                                                                                                                                                                         ttGCGAAAATGTTTGCGATGGTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATACCAATGAc                                >  2:1439499/1‑278 (MQ=255)
                                                                                                                                                                                                                                                                             gTAGACCAACGAAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCaa  >  1:1598758/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
AGGCTAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACAATGGCGTAGACAAAGCCACGATCTAACAAACTCAAGCGGCTAAAACTGAAATCGGCATCAATACTTGCGCCGTAAGAACCATAGCCATACACCAGCAACGGGTTGTGTCCTTTGCGAAAATGTTTGCGATGGTAGACCAAGCTAACCGGAACTTCGACGCCATCACGGGCGACTATCCACAGGTGTTCACTGCGGTAATTCGCCGCATAAAAACCAGGAACTTCCGTTTGTTTTAATACACGACGCTCACCGGTATCCATATCCAGTTCAAACAAAGTGTCTGGTGTAGTCATGGAAGAATAACCATAACGCAATCGCGCGGTTTCAGGTTCTGGATTGTAGGCAATCCAGGTCACATAGGCCGGATCATCAAAGGCAATACCAATGACTTCCCGGGTCTTGCGGTTAATTTGGCGCAA  >  CP042583/1607985‑1608541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A