Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,620,322 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,620,3220GC99.5% 505.9 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (113/100);  total (113/101)
Fisher's exact test for biased strand distribution p-value = 4.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,620,3230CG99.5% 503.6 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (113/100);  minor base T (0/1);  total (113/101)
Fisher's exact test for biased strand distribution p-value = 4.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01
*CP0425831,620,3240TA99.5% 508.8 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (112/101);  minor base C (1/0);  total (113/101)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 215 total aligned reads displayed.

CCAACAAAAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACGCTCTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCA  >  CP042583/1620044‑1620605
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                           
ccaaccaaAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCC‑CTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:1359110/289‑1 (MQ=255)
 caagtacaaTCTCGACTTCTTCATTCCTCCGCCGCGCAATCGAAGGATTATCCGCCTCTAACAGATCATCCATAGCTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATTTCCCCAGGACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  2:617265/282‑1 (MQ=255)
 caacaaAAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATGAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  2:231473/289‑1 (MQ=255)
 caacaaAAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:1932767/289‑1 (MQ=255)
 caacaaAAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:1622115/289‑1 (MQ=255)
 caacaaAAAGCTCGACTTCTTCAGTCCTCCGCGGCGCAATCCGATAATCATCCGCCCCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  2:1645190/289‑1 (MQ=255)
                         tcatCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGc                                                                                                                                                                                                                                                           <  1:1119917/289‑1 (MQ=255)
                                ccgcGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAg                                                                                                                                                                                                                                                     >  1:683610/1‑288 (MQ=255)
                                   cgcAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTAAATAC‑CGTCATTTCTCGCATGCAgacg                                                                                                                                                                                                                                                  >  2:272947/1‑288 (MQ=255)
                                       aTCGTATGATCATCCGCCACTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGc                                                                                                                                                                                                                                             <  1:239014/289‑1 (MQ=255)
                                                tcatcCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGcgac                                                                                                                                                                                                                                    >  1:485688/1‑289 (MQ=255)
                                                  atcCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGcgacg                                                                                                                                                                                                                                   >  1:317188/1‑288 (MQ=255)
                                                       ccTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCTCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGCCGACGCa                                                                                                                                                                                                                              >  1:1597075/1‑288 (MQ=255)
                                                        ctctCACAGATCCGCCTGCGGTGGGCGCACCGCAATCGTCACACGATGCGTCTTGCCATCATACAACGGAAACAGCGGTACAACGCGCGCACGGCACCCTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCAcc                                                                                                                                                                                                                            <  2:18078/289‑1 (MQ=255)
                                                        ctctAACAGTTAATCCCTCGGGGGGCGCACCGTAATCGTCAGACGATGCGTCTTGCCATAATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCGATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATTCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCAcc                                                                                                                                                                                                                            <  2:871118/289‑1 (MQ=255)
                                                        ctctAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    >  1:393995/1‑234 (MQ=255)
                                                        ctctAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCAc                                                                                                                                                                                                                             <  1:906800/288‑1 (MQ=255)
                                                              atgttcataCATCGGAGGGCGCACCTGAATCAGCAGCCGAGTCGTATTCCCATCGTAAATCGGAAACAGCGGTACAAACAGAGCACGGTCCACTTTCATCAAACGACCAAGCGCGGGCAACGGCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCCGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑c                                                                                                                                                                                                                     <  2:1296764/285‑1 (MQ=255)
                                                                 atcatcCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCGAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAg                                                                                                                                                                                                                  >  2:1179877/1‑289 (MQ=255)
                                                                 atcatcCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:1712790/225‑1 (MQ=255)
                                                                    ttccatgGTTGGGCGCTCCGAGATCGTCAGACACTGCGTCTGACCATCATAAATCGGAACAACCGGTACAACGCGCGAACGGCACACTATCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGAGTAAATAATATCTCCAGTACCCCTGACGTACCGACAGGATGAATGGTTTAATAC‑CGTCAGTACTCGCATGCAGACGACCGCCAGAGCGACGACGCACCGTGTT‑CCAGACa                                                                                                                                                                                                               <  2:662057/288‑1 (MQ=255)
                                                                    atccatcGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:530079/222‑1 (MQ=255)
                                                                    atccatcGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    >  2:530079/1‑222 (MQ=255)
                                                                    atccatcGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACa                                                                                                                                                                                                               >  1:1615370/1‑289 (MQ=255)
                                                                     tccatcGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACAt                                                                                                                                                                                                              >  1:638441/1‑289 (MQ=255)
                                                                        cacggggggcaccacTGCATCGTCGGACGATGCGTCTTGCCATCACAAAACGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCTCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAAt                                                                                                                                                                                                           <  2:1937698/275‑1 (MQ=255)
                                                                           ggTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGCTCCTGCTCGGGTAACTAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATCC‑CGTCATTTCTCGCATGCAGACGCCCGCCAACGCGACGACCCCCCTTGTT‑CCAGACATAATCac                                                                                                                                                                                                        >  2:214499/1‑288 (MQ=255)
                                                                               ggCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGTATGATTGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCTCCAACGCGACGACGCACCGTGTT‑CCCGACATACTCcaaaa                                                                                                                                                                                                     >  2:1753410/1‑288 (MQ=255)
                                                                                gcgcACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAAcc                                                                                                                                                                                                   >  1:1793050/1‑289 (MQ=255)
                                                                                       tGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGc                                                                                                                                                                                            <  2:336537/289‑1 (MQ=255)
                                                                                        gAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           <  2:485688/289‑1 (MQ=255)
                                                                                        gAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           <  1:1911725/289‑1 (MQ=255)
                                                                                            cGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGa                                                                                                                                                                                       <  2:317188/289‑1 (MQ=255)
                                                                                            cGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGa                                                                                                                                                                                       <  2:1615370/289‑1 (MQ=255)
                                                                                            cGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGa                                                                                                                                                                                       <  1:1480416/289‑1 (MQ=255)
                                                                                              tCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGAtt                                                                                                                                                                                     >  2:1576853/1‑289 (MQ=255)
                                                                                                aGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           >  1:744833/1‑281 (MQ=255)
                                                                                                aGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           <  2:744833/281‑1 (MQ=255)
                                                                                                   cGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGa                                                                                                                                                                                >  1:1268480/1‑289 (MQ=255)
                                                                                                     aTGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATCATGGaaa                                                                                                                                                                              >  2:1101030/1‑288 (MQ=255)
                                                                                                      tGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACa                                                                                                                                                                             >  1:17565/1‑289 (MQ=255)
                                                                                                         gTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCg                                                                                                                                                                          <  1:1527000/289‑1 (MQ=255)
                                                                                                                    atAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCAttt                                                                                                                                                                 >  1:584877/1‑287 (MQ=255)
                                                                                                                      aaaTCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTg                                                                                                                                                             <  1:1195036/289‑1 (MQ=255)
                                                                                                                        aTCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGc                                                                                                                                                            >  1:621025/1‑288 (MQ=255)
                                                                                                                        aTCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGc                                                                                                                                                            >  1:1503233/1‑288 (MQ=255)
                                                                                                                              aaCAGCGGTACGACGCGCGGACGGCAGACTTTCATCAAACGACCAATCGCAGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTtgcg                                                                                                                                                     <  2:1704375/289‑3 (MQ=255)
                                                                                                                              aaCAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTtgcg                                                                                                                                                     <  1:602413/289‑3 (MQ=255)
                                                                                                                                   cGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTtgcgaggcc                                                                                                                                                >  1:430205/1‑282 (MQ=255)
                                                                                                                                             cgcgcACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTCAGGAACCTCGCTGCCATTTTCTTCCCTTGCGAGGCCATCAGCATg                                                                                                                                       >  2:1497033/1‑288 (MQ=255)
                                                                                                                                             cgcgcACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCCGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCAAAAGCGACGAAGCACCGTGTT‑CCAGACATCATCAAAAACCGGGTTGCCCTGATTAAGGCACAACCCTGCCACTCTCTTCCCTTGCGGGGCCATCCGCagg                                                                                                                                       >  2:827004/1‑286 (MQ=255)
                                                                                                                                              gcgcACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc                                                                                                                                     <  1:1595946/289‑1 (MQ=255)
                                                                                                                                               cgcACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCa                                                                                                                                    <  1:279981/289‑1 (MQ=255)
                                                                                                                                                         acTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGa                                                                                                                          <  1:131971/289‑1 (MQ=255)
                                                                                                                                                                tcaAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    >  2:1897769/1‑130 (MQ=255)
                                                                                                                                                                tcaAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGaa                                                                                                                                                                                                                                                                                    <  1:1897769/130‑1 (MQ=255)
                                                                                                                                                                tcaAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCa                                                                                                                   >  1:1619931/1‑289 (MQ=255)
                                                                                                                                                                 aaaaGGACCAATCGCAGGCACCGTCGGTTTATAGGTGGCAAAGAAATCCACAAATGCGCTGTGCTCTGGGCCATGATGCTGATCGGGTAAATAATATCCCCAGTACCCCGGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTGTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCaa                                                                                                                  <  2:1486848/288‑1 (MQ=255)
                                                                                                                                                                    aCGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCg                                                                                                               <  1:75054/289‑1 (MQ=255)
                                                                                                                                                                     cGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGt                                                                                                              >  2:1520147/1‑289 (MQ=255)
                                                                                                                                                                      gcccAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTAAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTg                                                                                                             <  1:272947/287‑1 (MQ=255)
                                                                                                                                                                      gaacAATCGCGGGCACCGTAGCTGAGTAGTTGACAAAGAATTCTACAAATTGTGTCTGACTTGGGCCATGATCCTGATCGGGTAAATAATTTCCCCGTGACCTATGACGAACGGACTGGATGCATGGTTTAATAC‑CGTCATGTCTCGCATGCAGACGACCGCCAAATCGAGGTCGCACCGTGTT‑TCAGACATAATCAAACACTGGGTCGCCCTGATTATGGAACATCGCTGCCATTTTCTGTCCTTGCGAGGCCACCAGCATGGCAGGAATATCGACGGCCCAACCGTg                                                                                                             <  2:750693/286‑1 (MQ=255)
                                                                                                                                                                                gggCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGa                                                                                                   >  1:983911/1‑289 (MQ=255)
                                                                                                                                                                                 ggCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAAAATCGCTCCCATTTACTCCCCTTGCCAGGCCAACAGCCTGTCAGGAATATCGACGGACAAACCgatcgggccaataa                                                                                                  >  2:1049171/1‑276 (MQ=255)
                                                                                                                                                                                             ttATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTtct                                                                                      <  1:1497033/289‑1 (MQ=255)
                                                                                                                                                                                             ttATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTtct                                                                                      <  1:1576853/289‑1 (MQ=255)
                                                                                                                                                                                             tatatggTGACAAAGAAATCCACAAATTCGCTGTGCTCTGGTCCATAATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTtct                                                                                      <  2:683610/284‑1 (MQ=255)
                                                                                                                                                                                                taGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCCGGAATATCGACGGCCCAACCGTGAGGCACCCGAAAGATAACTTTCTCGt                                                                                   >  1:468333/1‑289 (MQ=255)
                                                                                                                                                                                                     ggCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGcc                                                                                                                                                                     <  2:593150/202‑1 (MQ=255)
                                                                                                                                                                                                      gCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATTGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGttatta                                                                              >  1:495917/1‑288 (MQ=255)
                                                                                                                                                                                                          aGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTAcgcc                                                                          >  1:1031726/1‑288 (MQ=255)
                                                                                                                                                                                                             aatcacaaaaTTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCAt                                                                      <  2:1503233/282‑1 (MQ=255)
                                                                                                                                                                                                                      atcggCTGTGCGCTGGGCCATGATCCGGATAGGGTAATGAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGACCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCgat                                                             <  2:1667731/285‑1 (MQ=255)
                                                                                                                                                                                                                      agtCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATCATCTCCCCAGTACCCCTGACGTACCTACTTGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCTCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCgat                                                             <  1:214499/287‑1 (MQ=255)
                                                                                                                                                                                                                      aTTCGCTGTGCTCTGTGCCCTGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCgat                                                             <  2:812170/289‑1 (MQ=255)
                                                                                                                                                                                                                                  ctGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTTCCCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGcc                                                  <  1:568248/289‑1 (MQ=255)
                                                                                                                                                                                                                                     ggCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc                                                                                                                                     <  2:1884951/202‑1 (MQ=255)
                                                                                                                                                                                                                                     ggCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGc                                                                                                                                     >  1:1884951/1‑202 (MQ=255)
                                                                                                                                                                                                                                        cATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCa                                           >  1:1426180/1‑289 (MQ=255)
                                                                                                                                                                                                                                          tGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGGCCTCGAAAGATAACTTTCTCGTCATTACGCCCGCTCTCTTCCATGATCTCCAGCCCTTGcccg                                          >  2:736474/1‑286 (MQ=255)
                                                                                                                                                                                                                                          tGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACCTTCTCGTTATTACCCCGCATCCCTTCGCTCATCCCCAGCCCTTGCCAg                                          >  2:1776737/1‑288 (MQ=255)
                                                                                                                                                                                                                                           gATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTtgcgag                                                                                                                                                   <  1:1071981/182‑5 (MQ=255)
                                                                                                                                                                                                                                               cTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAc                                     >  1:335949/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  aTCGGGTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCAATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAcgcgc                                 >  1:912518/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      ggTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAAcgcgcg                                >  1:1689491/1‑286 (MQ=255)
                                                                                                                                                                                                                                                       gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGCATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTCCGCCCCATCCCTGCGATCGTCTCCATCCCTTGCCCGTCCAcggccggccg                            >  2:1077149/1‑287 (MQ=255)
                                                                                                                                                                                                                                                       gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATACCTCTCTCGTTATTACGCCGCATCTCTGCGATTCACCTCAGCCCTTGCCCGTCAACCCGCgggcg                            >  2:47583/1‑286 (MQ=255)
                                                                                                                                                                                                                                                       gTAAATAATATCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCtc                            >  2:1270674/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               tatCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGCCGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTtct                    <  1:606950/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTCCGCCGCATCTCTTCGATGATCTCCAGCCCCTGCCAGTCAACCCCCGGCTGAATTTtcac                   >  2:1944038/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTtctc                   >  2:459519/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTcc                  >  1:1249030/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCAGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTcc                  >  1:1168699/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cattACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGcc              <  2:916700/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aGTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGccc             >  1:819468/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       gTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           <  2:632266/114‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gTACCCCTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGcc                                                                                                                                                                                           >  1:632266/1‑114 (MQ=255)
                                                                                                                                                                                                                                                                           cccTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCATTGCGAGGCCATCAGCATGGCTGGCATCTCGACGGCCCAACCGTGCGTCACCCGAAAGATAACTTTCGCGTTATTCAGACGACGCTCTTCGATGACCCCCAGCCCTTGCCCGTCAACCCCGAGCTGAATTTTCTCCAGCCcgcga         >  2:411604/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             cTGACGTACCGACTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGACTATGGAACATCGCTGCCATTTTCTGCCCTTGCGAGGCCATCTGCATGGCAGGAATATCGACGGCCCAACCGTTCGTCACCAGAAAGATAACTTTCTTGTTGTTACGCCGCTTCTCTCCGATGCGCCCCAGCCCTTGCCAGTCAACGCCCGTGTGAATTTTCTCCGGCCcgcgcttt      >  2:968682/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                                 agtaacatctGGATAAATGTTTTATAACGCGAAATTT‑TCACATGCAGAGCACGGCAGACGCGACGACGCACCGGGTT‑CCATACATATACACGAACCGGTTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCACTTGCAAGGCCATGAGCATGGAAGGAATATCGAAGGCCCAACCGTGCGGCACCAGAAAGATAACGTTATCGTTATTACGCCGCATATCCTCGATGATCTCCAGACCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCa  <  2:1597075/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                           
CCAACAAAAATCTCGACTTCTTCATTCATCCGCCGCGCAATCGTATGATCATCCGCCTCTAACAGATCATCCATCGGTGGGCGCACCTGAATCGTCAGACGATGCGTCTTGCCATCATAAATCGGAAACAGCGGTACAACGCGCGCACGGCACACTTTCATCAAACGACCAATCGCGGGCAACGTCGCTTTATAGGTGGCAAAGAAATCCACAAATTCGCTGTGCTCTGGGCCATGATCCTGATCGGGTAAATAATATCCCCAGTACCCCTGACGTACGCTCTGGATGAATGGTTTAATAC‑CGTCATTTCTCGCATGCAGACGACCGCCAAAGCGACGACGCACCGTGTT‑CCAGACATAATCAAAAACCGGGTTGCCCTGATTATGGAACATCGCTGCCATTTTCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCA  >  CP042583/1620044‑1620605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A