Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,635,066 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,635,0660AT98.8% 764.7 / NA 330intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (151/173);  minor base G (1/3);  total (153/177)
Fisher's exact test for biased strand distribution p-value = 6.27e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,635,0670GC99.7% 772.8 / NA 330intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (153/176);  total (153/177)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,635,0680CG98.5% 764.9 / NA 330intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/2);  new base G (150/174);  total (153/177)
Fisher's exact test for biased strand distribution p-value = 6.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 330 total aligned reads displayed.

TACCATCGCCGTAGTCCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAAAGCCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGC  >  CP042583/1634787‑1635344
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                    
 aCCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGa                                                                                                                                                                                                                                                                              <  1:689156/289‑1 (MQ=255)
  ccATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGAt                                                                                                                                                                                                                                                                             >  1:1070611/1‑289 (MQ=255)
  ccATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGAt                                                                                                                                                                                                                                                                             >  1:220875/1‑289 (MQ=255)
       gccgttcaccGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGGTGGCCGATTTcc                                                                                                                                                                                                                                                                         >  2:1627099/9‑288 (MQ=255)
       gccgttcaccGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCt                                                                                                                                                                                                                                                                        <  1:293473/281‑1 (MQ=255)
           ttcagcGCTGGGGCAGCTATGGCAGTTGAAAGGTCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGAGGGTGATGAGAACACGGTGCGGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGa                                                                                                                                                                                                                                                                     <  2:1240095/283‑1 (MQ=255)
                    ggAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTGGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGAt                                                                                                                                                                                                                                                           <  1:1449740/289‑1 (MQ=255)
                     gggCAGCTATGGCAGTTGAAAGGTCAACTGGTAAAGGAAGGTGAACGGGTGCTGGAAACGCTGGTTATTGATGGTGAGGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGAt                                                                                                                                                                                                                                                           <  2:1661944/286‑1 (MQ=255)
                     gAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGAt                                                                                                                                                                                                                                                           <  2:622519/288‑1 (MQ=255)
                       gCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATcc                                                                                                                                                                                                                                                         <  1:1031141/288‑1 (MQ=255)
                          tCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGTCGATTTCCTCGACCCAAATGAACCgtgt                                                                                                                                                                                                                                                     >  2:393004/1‑289 (MQ=255)
                             aTGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGCAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTaaa                                                                                                                                                                                                                                                  >  1:1812515/1‑289 (MQ=255)
                              tGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTaaaa                                                                                                                                                                                                                                                 <  1:1877759/289‑1 (MQ=255)
                               ggCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAAc                                                                                                                                                                                                                                                >  2:1021691/1‑289 (MQ=255)
                               ggCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGATACGCACAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGTACTACGGTTTTGTAGATATACGCAATGCGCATGGCAGCGTTACCCCCACAGAAGAGCAGAGCACG‑ACCGACAGGATGGTTAACGACTCGCGCGCCGCGTTCCCCGATTCACATGATCTGGGTgaatc                                                                                                                                                                                                                                                >  2:56319/1‑287 (MQ=255)
                                    ttGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCAGATTTCCCCGACCCACATGATCCGGGTAAACGGGTgg                                                                                                                                                                                                                                           >  2:1765235/1‑289 (MQ=255)
                                     tGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATAGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGt                                                                                                                                                                                                                                             <  1:34289/286‑1 (MQ=255)
                                        aaGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAgg                                                                                                                                                                                                                                       <  1:1627099/289‑1 (MQ=255)
                                                             gTGAACTGGTGGTGGAAACGCTGGTTAGTGATGGTGCTGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGGGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcg                                                                                                                                                                                                                   <  2:655199/288‑1 (MQ=255)
                                                             gTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCt                                                                                                                                                                                                                                                                        >  2:580654/1‑235 (MQ=255)
                                                             gTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgc                                                                                                                                                                                                                    <  1:650485/287‑1 (MQ=255)
                                                              tGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCCGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGGAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcg                                                                                                                                                                                                                   <  2:238991/287‑1 (MQ=255)
                                                              tGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcgc                                                                                                                                                                                                                  <  2:70278/288‑1 (MQ=255)
                                                              tGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcg                                                                                                                                                                                                                   <  1:1021691/287‑1 (MQ=255)
                                                              tGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAAGGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcgc                                                                                                                                                                                                                  <  1:923916/288‑1 (MQ=255)
                                                                     gTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGACTGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGGAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGGGCCGa                                                                                                                                                                                                          >  2:1032752/1‑289 (MQ=255)
                                                                          ggAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATATCCTCGACCCACATGATCCGGGTAAAACGGGGTAAGGTTATCCGGCAACTACACGCGGGGGCCTGATTgcg                                                                                                                                                                                                     >  2:1759340/1‑289 (MQ=255)
                                                                            aaaCGCTGGTTATTGAGGGTGATGGGAACACGGTGCTGGTACCAGGGGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTgcgcg                                                                                                                                                                                                   <  2:1845824/289‑1 (MQ=255)
                                                                              aCGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCa                                                                                                                                                                                                 <  2:544217/289‑1 (MQ=255)
                                                                                gCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAg                                                                                                                                                                                               <  1:1587308/289‑1 (MQ=255)
                                                                                gCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGAAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAg                                                                                                                                                                                               <  2:696/289‑1 (MQ=255)
                                                                                      tATGGATGGGGATAAGAACAAGGTGCTGGTAGCAGGCGATCGTTACGCGCAAATGCGTAGAGTCGATGTCATCCCTTCCGAGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGCGTTTATAGAGATCCGCATTGGGGGTGTGGGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCGGGCCGATTTCCTCAACCCACATGGTCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCGGATTGCGCGCAAGCCGTa                                                                                                                                                                                          <  2:1321519/288‑1 (MQ=255)
                                                                                              gTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTgg                                                                                                                                                                                 >  2:776563/1‑289 (MQ=255)
                                                                                                  tgaGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGACGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTTCGCGTAAGCCGTAAAGGTCTGGCAtt                                                                                                                                                                             >  2:1911869/1‑289 (MQ=255)
                                                                                                  ggagaACACGGTGCCGGTACCTGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTAATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTAt                                                                                                                                                                              <  2:1127911/287‑1 (MQ=255)
                                                                                                        cacGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGcc                                                                                                                                                                       >  1:253583/1‑289 (MQ=255)
                                                                                                             tGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAAcgcgc                                                                                                                                                                                                                  <  1:7200/241‑1 (MQ=255)
                                                                                                             tGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGAGTGCGCGCAAGACGTAAAGGTCTGGTATTACTGCCGGAt                                                                                                                                                                   >  1:31076/1‑288 (MQ=255)
                                                                                                                tGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATgcg                                                                                                                                                                >  2:591125/1‑288 (MQ=255)
                                                                                                                     ccAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTTGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGa                                                                                                                                                          <  1:1763707/289‑1 (MQ=255)
                                                                                                                       aGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTg                                                                                                                                                                                                                                            >  2:1389068/1‑205 (MQ=255)
                                                                                                                       aGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAAc                                                                                                                                                        >  2:634791/1‑289 (MQ=255)
                                                                                                                       aGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAAc                                                                                                                                                        >  1:498276/1‑289 (MQ=255)
                                                                                                                       aGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAAc                                                                                                                                                        >  1:361763/1‑289 (MQ=255)
                                                                                                                       aGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAAc                                                                                                                                                        >  1:170091/1‑289 (MQ=255)
                                                                                                                            aTCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATCGCGCGCAAGCCGTACAGGTCTGGTATTCCTGCCGGATGCGGCGGGAAccccct                                                                                                                                                   >  2:1691967/1‑287 (MQ=255)
                                                                                                                                 tACGCGCAAATGCGTAATGTCTATTTCAGCCGTTCCGGGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCg                                                                                                                                              <  2:446324/289‑1 (MQ=255)
                                                                                                                                   cgcgCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTg                                                                                                                                                           <  1:1304836/274‑1 (MQ=255)
                                                                                                                                       cAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        >  2:1063981/1‑289 (MQ=255)
                                                                                                                                        aaaTGCGTAATTTCTATTTCTGCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCTAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                                                        <  2:893610/288‑1 (MQ=255)
                                                                                                                                            gCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTGGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAc                                                                                                                                   <  1:1399121/289‑1 (MQ=255)
                                                                                                                                                 agtccTATTTCA‑CCCCTCCCCGCTGGGCGCTGAAAAACTTGCTAAAGAATGGTGGTTTTGGAGATATCCGGATGGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGc                                                                                                                              <  2:49137/285‑1 (MQ=255)
                                                                                                                                                 aggTCTATTTCATCCCTTCCCGGCT‑GGGGCTGAAAAACGGGCTGAAGAAGTTTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGc                                                                                                                              <  2:804155/287‑1 (MQ=255)
                                                                                                                                                 aTGTCAATTTTGTCCCTGCCGCGCA‑GGCGCTGAGAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGAGGAGGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGTTTATCCGGAACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGc                                                                                                                              <  2:1079003/289‑1 (MQ=255)
                                                                                                                                                      tATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAAtt                                                                                                                         <  1:1375471/289‑1 (MQ=255)
                                                                                                                                                        tttCATCCCTTCGGCGCG‑GGGGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCa                                                                                                                       <  2:119674/289‑1 (MQ=255)
                                                                                                                                                        tttCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCa                                                                                                                       <  1:579254/289‑1 (MQ=255)
                                                                                                                                                         ttCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCaa                                                                                                                      >  1:1731833/1‑289 (MQ=255)
                                                                                                                                                             tCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTa                                                                                                                                                                                          >  1:625818/1‑217 (MQ=255)
                                                                                                                                                             tCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAatata                                                                                                                  <  1:885515/289‑1 (MQ=255)
                                                                                                                                                              cccTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAata                                                                                                                    >  1:804155/1‑286 (MQ=255)
                                                                                                                                                                 ttCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGc                                                                                                              <  1:1231136/289‑1 (MQ=255)
                                                                                                                                                                 ttCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGc                                                                                                              <  1:591125/289‑1 (MQ=255)
                                                                                                                                                                  tCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGTTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCa                                                                                                             <  1:556358/289‑1 (MQ=255)
                                                                                                                                                                  tCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCa                                                                                                             >  2:454927/1‑289 (MQ=255)
                                                                                                                                                                  tCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGATATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCa                                                                                                             <  1:5472/289‑1 (MQ=255)
                                                                                                                                                                  tCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAAACGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCa                                                                                                             <  2:220875/289‑1 (MQ=255)
                                                                                                                                                                       gct‑ggcgctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGa                                                                                                         <  2:1779770/288‑1 (MQ=255)
                                                                                                                                                                       gct‑ggcgctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGa                                                                                                         <  2:294638/288‑1 (MQ=255)
                                                                                                                                                                       gct‑ggcgctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGa                                                                                                         <  1:454927/288‑1 (MQ=255)
                                                                                                                                                                            gcgctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATg                                                                                                    >  2:125738/1‑289 (MQ=255)
                                                                                                                                                                             cgctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATg                                                                                                    <  1:151642/288‑1 (MQ=255)
                                                                                                                                                                              gctgAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGTCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGt                                                                                                   <  1:754187/288‑1 (MQ=255)
                                                                                                                                                                                 gAAAAGCTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGAGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGc                                                                                               <  1:393004/289‑1 (MQ=255)
                                                                                                                                                                                  aaaaaCTGGCGGGAGAAGTGTGGTGTGGTAGATAGCCGCAGTGCGGGTGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCAGCGAATGGATGGTTACCGAGTCGCTGGCCGATTGCCTCGACCGACATGGTCCGGGTAAAACGGGGGAAGGTTATCCGGCACCTAAACGCGCGGGGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGc                                                                                               <  2:526583/288‑1 (MQ=255)
                                                                                                                                                                                     aaCTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGa                                                                                           <  1:1484959/289‑1 (MQ=255)
                                                                                                                                                                                      acgggCTGAAGGAGTGTGGTTTTGTGGATAGCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGAAGCG‑ACGCACCGAATGGATGGTTGCCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGAt                                                                                          <  2:420281/286‑1 (MQ=255)
                                                                                                                                                                                      aCTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGAt                                                                                          <  1:1148999/289‑1 (MQ=255)
                                                                                                                                                                                            tGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCa                                                                                     <  1:396781/288‑1 (MQ=255)
                                                                                                                                                                                                    tgtgGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGa                                                                                                         >  2:717369/1‑260 (MQ=255)
                                                                                                                                                                                                    tgtgGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCAt                                                                             <  2:39758/288‑1 (MQ=255)
                                                                                                                                                                                                      tgGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCAACATGATCCGGGTAAAACGGTGGAAGTTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAg                                                                          <  1:1759340/289‑1 (MQ=255)
                                                                                                                                                                                                           ttGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTATGCCTGATAAGCATAGCGCATCAGGCa                                                                       >  1:112152/1‑287 (MQ=255)
                                                                                                                                                                                                                  tatCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCGGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGt                                                              <  1:439111/289‑1 (MQ=255)
                                                                                                                                                                                                                   atCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTaa                                                                                                                                                                                         <  2:1862668/165‑1 (MQ=255)
                                                                                                                                                                                                                   atCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGtt                                                             >  2:883469/1‑289 (MQ=255)
                                                                                                                                                                                                                     ccGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGCCCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTTCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGATTTTTGAGGCCGAATAAGAATAGCGCATCAGGCCACTTTACGttg                                                            >  2:1577045/1‑287 (MQ=38)
                                                                                                                                                                                                                        cATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCAt                                                        >  1:105425/1‑289 (MQ=255)
                                                                                                                                                                                                                                     aGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATg                                                                                                    >  1:1667978/1‑232 (MQ=255)
                                                                                                                                                                                                                                     aGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGccc                                           >  1:399390/1‑289 (MQ=255)
                                                                                                                                                                                                                                       cGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAgg                                                                                                                                                                                      <  1:196647/148‑1 (MQ=255)
                                                                                                                                                                                                                                          tACCACAACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGttt                                       <  1:959635/288‑1 (MQ=255)
                                                                                                                                                                                                                                           accacaACAGAAGAGCAGCG‑CCGAGCCGAGTGGAAGGTTACCGATGCGCTGGCCGATGCACTCGACCCACAGGATCCGGGTAAAACGTTGGAAGGTTATCCGGAACCTAACCGCGCGGGGCTGATTGCGCGCAAGCCGTAAGGGTCTGGTATTACTGCCGGATGCGGGGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTcc                                     <  2:1172615/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    gaagaGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCg                                                                                                                                              >  2:354921/1‑175 (MQ=255)
                                                                                                                                                                                                                                                     aagaGCAGCG‑ACGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTAt                            >  1:780511/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              cacataccggAATGGAGGGTTACCGAATCGCAGGCCGATTTCCCCGACCCACATGGTCGGGGTAAAACGGTGGAAGGTTATCCGGCCCCTAAACGCGTGGTGCTGGTTGCGCGAAAGCCGTAAAGGTCTGGTATTCCTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCt                    <  2:1496534/279‑1 (MQ=37)
                                                                                                                                                                                                                                                                aCGCACCGAATGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGGTTCCGGGCGCTATTTACGCCTTa                  >  2:203971/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        aaTGGATGGTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGaa          >  2:1298979/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                               ggTTACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAgctggc  <  1:125738/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  tACCGAATCGCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGc                                                                                                              <  1:1001725/178‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                    
TACCATCGCCGTAGTCCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCT‑GGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCG‑ACGCACCGAATGGATGGTTACCGAAAGCCTGGCCGATTTCCTCGACCCACATGATCCGGGTAAAACGGTGGAAGGTTATCCGGCACCTAAACGCGCGGTGCTGATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAACAGCTGGC  >  CP042583/1634787‑1635344

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A