Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,664,849 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,664,849 | 0 | A | T | 97.5%
| 556.0
/ NA
| 240 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (136/98); minor base G (1/5); total (137/103) |
| Fisher's exact test for biased strand distribution p-value = 8.68e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,664,850 | 0 | C | G | 99.2%
| 550.3
/ NA
| 240 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (135/101); minor base A (0/2); total (137/103) |
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,664,851 | 0 | T | A | 100.0%
| 569.0
/ NA
| 240 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (137/103); total (137/103) |
Only 100 of 240 total aligned reads displayed.
CACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGGCTAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGACTATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTGCTAACGTAAAATCCGGCACG‑GCTGACATACATCGCCTGTTCAACCAT‑GCTGCTGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCGCTCACACCATTAACTGGCAGAGTGCGTCGT > CP042583/1664569‑1665125
|||
cACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGcc < 1:687885/289‑1 (MQ=255)
cGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATGGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCaa < 2:1560615/289‑1 (MQ=255)
cGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCaa < 2:272279/289‑1 (MQ=255)
accAAAACGATACCTTGTTCGATGTGCAGGATTGTAAGATGTCGACAGTGTCAGCTTATAGGCATAGAACTGTTAATGATCGTCGCGGTTTTGATCGAGCGCGTTTCTTAAAAAGTGCTGCATAGGACGCACGGGGATAGTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGCACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGGGAACCAGCGTACCGCGCGGTTACGATTGTCGCGTTGTAAATGGTCAATAGAc < 2:1090716/287‑1 (MQ=255)
tGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGCTTTGTTCGTTGTGAATGGCCAATAAACAGGGGTTTGGTGGCa > 2:57922/1‑289 (MQ=255)
tGTTGGATGGGGAGGAGTGGAAGAGGTCAAAAATATCAGCTTACTGTCATAGAGCGGAGACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGACCACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTTACGATTTTCGCGGTGTGAATGGGCAACAAACCAgtggaggtctagg > 2:107795/1‑277 (MQ=255)
gTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACAt < 1:347370/289‑1 (MQ=255)
ttGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATa > 1:1922355/1‑289 (MQ=255)
aTTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGtaataa < 1:225504/286‑1 (MQ=255)
aTTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGtaataa < 1:646658/286‑1 (MQ=255)
aTTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGtaataa < 1:57053/286‑1 (MQ=255)
gAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTg > 1:517657/1‑289 (MQ=255)
gAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTg > 1:1083301/1‑289 (MQ=255)
ggTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGACTGGCCAATAAACCCGGGTTGGGTGACATAACCGTAATAGCGCGTTgtacaa > 2:39573/1‑284 (MQ=255)
ggTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACCGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACa > 2:606264/1‑289 (MQ=255)
gTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTgg < 2:427892/258‑1 (MQ=255)
cTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGtcgaa > 1:1183293/1‑285 (MQ=255)
tCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCgg < 2:1184262/289‑1 (MQ=255)
gTTTTTATCGCTGGCGTTTCTTAAAAATTTCTGCGTCGTACTCACGGGAATACTCGTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTACCCTGCGGTTCAGTATTGCTCGCGTGTTCCGGGTGCGAAGTGAACCAGCGTACGGGGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACTAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACgc < 2:711277/289‑2 (MQ=255)
tGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGacataca > 1:121465/1‑288 (MQ=255)
gTTTCTTAAAAATTGCTGCATAGTCCGAACGGGAATACTCATCCCCAGCCCGCCATACAAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGc < 2:1922355/288‑1 (MQ=255)
aaaaaaTGCTGCATGGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCaa < 2:1199087/289‑1 (MQ=255)
aaTTGCAGCATTATCCGCACGGGAATACTTCTCCCCAGCAAGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCTTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCa < 1:358786/289‑1 (MQ=255)
aTTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAt < 1:1032269/289‑1 (MQ=255)
ctgcATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGTAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgac > 1:602423/1‑285 (MQ=255)
cATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGAc > 2:370888/1‑183 (MQ=255)
cATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGAc < 1:370888/183‑1 (MQ=255)
tACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgaggagtt > 1:1813022/1‑277 (MQ=255)
tACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgaggagtt > 2:242403/1‑277 (MQ=255)
tACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgaggagtt > 2:870313/1‑277 (MQ=255)
aCGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgaggagtt < 2:676012/288‑13 (MQ=255)
cGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgaggagttgt > 1:288712/1‑275 (MQ=255)
aCGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGa < 2:1261266/195‑1 (MQ=255)
ggAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTa > 1:1440564/1‑289 (MQ=255)
aaTACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGtcga < 2:832101/222‑4 (MQ=255)
aaTACTCATCCCCAGAACGCCATACCAGTAGTTATTACTGTCTCCCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgag < 2:157605/274‑8 (MQ=255)
aTACTCTTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCGGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAGCCCGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGt < 2:1671741/288‑1 (MQ=255)
aTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAAc < 2:1812912/257‑1 (MQ=255)
ccccAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAg < 2:539301/289‑1 (MQ=255)
ccccAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGGTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAg > 1:579017/1‑289 (MQ=255)
aGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACAt > 2:1763347/1‑157 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgagg > 1:769354/1‑252 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAtcgacgagg < 2:769354/260‑9 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCa < 1:1360688/289‑1 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCGGTTCAACCAT‑CGACGAGGAGTTGTGCGCTATTCGCCGCAAGT‑AACCa > 2:1359320/1‑289 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTA‑CGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATACCGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAAACAT‑CGACGAGGAGTGGTGCGCTATGTGCAGCAAGT‑AACCaa > 2:122656/1‑289 (MQ=255)
aCCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAg > 1:1065277/1‑289 (MQ=255)
attaCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGCGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTCGTGCGCTAGTCGCACCAAGG‑AACCAACTTCCatgccgccggta > 2:1525421/1‑278 (MQ=255)
attaCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCCT‑CCACGAGGATTTGTGCGCTAGTGCCCGCCAGT‑AACCAACTTACAGTGCAGCTGTa > 2:1719764/1‑289 (MQ=255)
attaCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTa > 1:992017/1‑289 (MQ=255)
taCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACTTAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTTCGCTAGTTGCAGCAAGT‑AACCAAATTCCCGTGACCCGGTAAt > 1:1645235/1‑289 (MQ=255)
taCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGCTGGGTGACATAGCCCTCATAACGAGTTGGCACATTGCGCGGAAACAATGTCGCCGGCGCCGAAACTTAAAAACCGTAACGCGGTGCCA‑ACATGCTCTTTCCACACAT‑CGACGAGGAGTTGTGCGCGCGTGCCATCAAGT‑AACCAACTTCCAGTGCAGCGGAAAt > 2:1353005/1‑289 (MQ=255)
aCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTTCGCTAGTCGCAGCAAGT‑AAc > 1:1572325/1‑266 (MQ=255)
tGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCg < 1:1247430/253‑1 (MQ=255)
ttCTACCGGAACACGGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGGCGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCa < 2:969806/288‑1 (MQ=255)
tCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCTCCTGTTCAACCATCGCCG‑AGGCGTTGTGCTCTATTCGCACCAAGT‑AACACACTTCCAGTGCAGCGGTAATTTCAt > 2:1237475/1‑289 (MQ=255)
cTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCATCGACGC‑GGAGTTGTGCGCTAGTCGCAGCAAGG‑AAACAACTTCCAGGGCAGCGGTAATTTCAtt > 1:46560/1‑289 (MQ=255)
cTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCAtt > 1:1111451/1‑289 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTg > 1:84435/1‑289 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCGGCGTATAACCGTACAATCCAGCACG‑TGACACATCACTGACCTGTTCAACCATAGCCG‑AGGAGTTGTGACCTAGTAGCAGCCAGT‑AACCAACTTCCAATGCAGCGGGAATTTctatg > 2:1611681/1‑285 (MQ=255)
aaCACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAg < 1:1612156/288‑1 (MQ=255)
aaCACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACAAT‑CGACGAGAAGTTGTGCGCGAGCCGACGCAATT‑TACCCACTTCCACGGCAGCGGTAATTTCATGGTCggag > 2:1129845/1‑286 (MQ=255)
cacTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTg > 1:1536004/1‑264 (MQ=255)
gACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCa > 1:1600662/1‑289 (MQ=255)
aaacTGCGTTTTATTGTTGATGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg < 2:1440564/286‑1 (MQ=255)
aaCCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGTCATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg < 2:799525/289‑1 (MQ=255)
ccTGCGGTTCAGTATTGCTGGCGTGTTCGGGTTTCGAAGTGAACCCGCGTACCGAGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGAGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcgcg < 2:913244/289‑1 (MQ=255)
gCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCgag > 1:1857930/1‑288 (MQ=255)
ggTTCAGTATTGCTGGCGTTGTCCGGTTGAGAAGTGAACCAGCGTACCGCGCGGGGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGAc < 1:841735/288‑1 (MQ=255)
ggTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCCACGCCTTCATTTTCGCCAGACa > 2:1326366/1‑289 (MQ=255)
cAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAAGAAGGTCGGCTGCGTCGAAACGTAAACTCCGGCACG‑CGAGACATACATATACGGGTTAACCATCGACGAGGGAG‑TGTGCGCGAGTCGCAGCCAGTAAACCAATTTCCTGT‑CAGCGGGAATTTAATTGTACAGGCGTTCActtttagtgtacagca > 2:1850834/1‑276 (MQ=255)
cTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCaa < 2:350459/70‑1 (MQ=255)
cTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACgcgaga < 2:21267/166‑6 (MQ=255)
cTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTcccc > 1:1853369/1‑288 (MQ=255)
gtgtTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg > 2:1758298/1‑265 (MQ=255)
gtgtTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg < 1:1758298/265‑1 (MQ=255)
gtgtTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTg > 1:1239518/1‑289 (MQ=255)
ttCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACt > 1:1152439/1‑289 (MQ=255)
ttCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGACACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCCGTGCAGCGGTAACTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGCCt > 1:413674/1‑289 (MQ=255)
tcaggttgcgaaGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTa < 1:1938596/278‑1 (MQ=255)
gcgaaGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGCGCAGCGGTAATCTCCTTTTCGAGGCTTTCATTTTCGCGAGTCCGGAGATTCCCCTCGCTGACTAATGCAt > 1:1590613/5‑288 (MQ=255)
aGTGAACCAGCGTTCCGCGCGTTGACGATTTTCTCGTTGGGAATTGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAACCAAGGTCGGCTGCGTCGTAACGTAAATTCCGGCACG‑CGGGACATACATCGCCTGTTCAACCAT‑CGTCGAGGAGTTGTGCGCTAGTCGCAGCATGG‑AACCAACTACCAGTGCAGCGGTAATTTCAGTGACGAGTCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTTACTAATGCATccga < 2:566789/288‑4 (MQ=255)
gAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATccgaca < 1:1828545/287‑6 (MQ=255)
aaaCCAGCGAACCGCGCGGTGCCGATATTCTCGTGGGGAATGGCAAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACAGTGCGCGTAAACAAGTTCGGCTGCGACGAAACGTAAAATCCGGCACG‑CGATACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCACCTTCCAGTGCAGCGGTAATTGCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCTCTGACTAATGCATccgaca < 2:303871/286‑6 (MQ=255)
aaaCCAACGTACCGAGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTCACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATccgaca < 2:1453208/286‑6 (MQ=255)
gTACGGGGCGGTGACGATTTACTCGTTGGAAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCAtt < 2:1403029/286‑1 (MQ=255)
gTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCAtt < 2:1600662/286‑1 (MQ=255)
gTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAAc < 1:1581896/289‑1 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCg < 2:1667242/259‑1 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCg > 1:1667242/1‑259 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:1531994/1‑286 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:1012299/1‑286 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:830442/1‑286 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:56418/1‑286 (MQ=255)
cgcgGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AAc < 1:1806483/186‑1 (MQ=255)
cgcgGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AAc > 2:1806483/1‑186 (MQ=255)
cgcgGTGACGATTTTCTCGCTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACg < 2:1813869/124‑1 (MQ=255)
cgcgGTGACGATTCTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCCAGACAGGAGATTGCCCTCGCTGACTAATGCATCCGACACACCATTAACTggaac > 2:130682/1‑286 (MQ=255)
cgGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCagag > 1:134135/1‑289 (MQ=255)
ttttCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACCAT‑CGACGAGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGcgtcgt < 2:1065277/288‑1 (MQ=255)
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CACGAGGATCAAAAATATTCCCTGTTGGATGGTCAGGATTGGAAGAGGTCAAAAATCTCAGCTTACTGTCATAGAGCTGATACTCACCATCGAGGTTTTTATCGATGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGGCTAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGACTATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTGCTAACGTAAAATCCGGCACG‑GCTGACATACATCGCCTGTTCAACCAT‑GCTGCTGGAGTTGTGCGCTAGTCGCAGCAAGT‑AACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCGCTCACACCATTAACTGGCAGAGTGCGTCGT > CP042583/1664569‑1665125
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
