Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,664,951 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,664,951 | 0 | G | C | 99.2%
| 584.3
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base C (135/113); total (137/114) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,664,952 | 0 | C | G | 99.6%
| 577.8
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (137/113); minor base T (0/1); total (137/114) |
| Fisher's exact test for biased strand distribution p-value = 4.54e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,664,953 | 0 | T | A | 99.2%
| 565.5
/ NA
| 251 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base A (134/112); total (137/114) |
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 251 total aligned reads displayed.
TGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGGCTAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGACTATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTGCTAACGTAAAATCCGGCACG‑GCTGACATACATCGCCTGTTCAACC‑AT‑GCTGCTGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCGCTCACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACGAGAGCTTCGCGCA > CP042583/1664674‑1665231
|||
tGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGacataca > 1:121465/1‑288 (MQ=255)
gTTTCTTAAAAATTGCTGCATAGTCCGAACGGGAATACTCATCCCCAGCCCGCCATACAAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGc < 2:1922355/288‑1 (MQ=255)
aTTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑At < 1:1032269/289‑1 (MQ=255)
ggAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTa > 1:1440564/1‑289 (MQ=255)
aaTACTCATCCCCAGAACGCCATACCAGTAGTTATTACTGTCTCCCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑Atcgacgag < 2:157605/274‑8 (MQ=255)
aTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAAc < 2:1812912/257‑1 (MQ=255)
aTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAAc > 1:1812912/1‑257 (MQ=255)
aTCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCgcagca > 1:1331781/1‑289 (MQ=255)
ccccAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAg < 2:539301/289‑1 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑Atcgacgagg > 1:769354/1‑252 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑Atcgacgagg < 2:769354/260‑9 (MQ=255)
cACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCGGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTATTCGCCGCAAGTAACCa > 2:1359320/1‑289 (MQ=255)
aCGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCa < 2:1599969/288‑1 (MQ=255)
cAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAAACCGGCACG‑CGAGAAATACATGGCCTGTTCAACC‑AT‑CGACGAGGAGTTGTTGGGCATGT‑GCAGCCAGCAACCAACCTCCAGTg > 2:575188/1‑289 (MQ=255)
gtTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGCACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGATCAACC‑ATCGCCG‑AGGAGTTG‑TGCGCTAGTCTCACCAAGTAAACAACTTCCAGTTCAGCg > 2:1450528/1‑289 (MQ=255)
gtTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCg > 2:337694/1‑289 (MQ=255)
attaCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGATGTG‑TGCGCTTGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTa > 2:1671186/1‑289 (MQ=255)
attaCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTa > 1:529576/1‑289 (MQ=255)
taCTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGCTGGGTGACATAGCCCTCATAACGAGTTGGCACATTGCGCGGAAACAATGTCGCCGGCGCCGAAACTTAAAAACCGTAACGCGGTGCCA‑ACATGCTCTTTCCACAC‑AT‑CGACGAGGAGTTG‑TGCGCGCGTGCCATCAAGTAACCAACTTCCAGTGCAGCGGAAAt > 2:1353005/1‑289 (MQ=255)
tGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCg < 1:1247430/253‑1 (MQ=255)
tCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCTCCTGTTCAACC‑ATCGCCG‑AGGCGTTG‑TGCTCTATTCGCACCAAGTAACACACTTCCAGTGCAGCGGTAATTTCAt > 2:1237475/1‑289 (MQ=255)
tCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCAt > 1:1649795/1‑289 (MQ=255)
tCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTCCCAGTCGAGCGGTAATTTCAt > 2:1071789/1‑289 (MQ=255)
cTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑ATCGACGC‑GGAGTTG‑TGCGCTAGTCGCAGCAAGGAAACAACTTCCAGGGCAGCGGTAATTTCAtt > 1:46560/1‑289 (MQ=255)
cTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCAtt > 1:1111451/1‑289 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATCAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGAGTAAACAAGGGCGGCTGCGTCGAAACGTAAAATACGGCACG‑CGAGACATACATCGCCTGTTCACCCAAC‑GACGAT‑GAGTTG‑TCCGCTAGTCGTCGCAAGTCACCAACTTCCAGTTCCACGGTAGTTTc > 2:883154/1‑285 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTg > 2:784227/1‑289 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTg > 1:35175/1‑289 (MQ=255)
tACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGGTGGAACATTTCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACAACGCCTGTTCAACC‑AT‑CGACGACGAGTTG‑TGCCCTCACCGCCGCAGTTAACCAATCTCCCGTGCAGCGGTAATTTc > 2:1735539/1‑285 (MQ=255)
aaCACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAg < 1:1612156/288‑1 (MQ=255)
aaCCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg < 1:1907868/289‑1 (MQ=255)
aaCCCGCGGGTCAGGATGGCTGGCGGGTTCCGGGTGCGAAGTGAACCAGCGTACAGGGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg < 2:285723/289‑1 (MQ=255)
gCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcggtgg > 2:1828545/1‑284 (MQ=255)
gCGGTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCgag > 1:1857930/1‑288 (MQ=255)
gggttcgattatggtGGGGTGTTCCGGTTGAGAAGGGAACCAGCGTACCGCGCGGGGAAGATTTTCTCGTTGGGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCgaga < 2:1216571/274‑1 (MQ=255)
ggTTCAGTATTGCTGGCGTTGTCCGGTTGAGAAGTGAACCAGCGTACCGCGCGGGGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGAc < 1:841735/288‑1 (MQ=255)
ggTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACa > 2:1331760/1‑289 (MQ=255)
ggTTCAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACa > 1:252739/1‑289 (MQ=255)
cAGTATTGCTGGCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCAGCTGCGTCGAAACGTAAAATCCGGCACG‑CGTGACATACATCGCCTTTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCCGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAgggg > 2:226010/1‑287 (MQ=255)
ggctggtTCCGGTTGCGAAGTGAACCATCGTCCCGCGCGGTGACGATTTTCTCGTTGTGAATTGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACACGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCg < 2:68805/284‑1 (MQ=255)
ggCGTGTTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCg < 2:1637070/289‑1 (MQ=255)
gtgtTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTcg > 2:1758298/1‑265 (MQ=255)
gtgtTCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTg > 1:1239518/1‑289 (MQ=255)
ttCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACt > 2:600331/1‑289 (MQ=255)
ttCCGGTTGCGAAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGACACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCCGTGCAGCGGTAACTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGCCt > 1:413674/1‑289 (MQ=255)
tcaggttgcgaaGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTa < 1:1938596/278‑1 (MQ=255)
gttgcgaaGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGGTGGGTGACATAGCCGTAATAACGCGATGGAAAATTGCGCGTAAACAAGGTCGGCTGCGTCGAGACGTAAAATCCGGCACG‑CGAGACATACATCCCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TTCGCTAGTCGCAGCAAGCAACCAACTTCCAGTGCAGCGGGAATTTCCTTGTCGAGGCTTTCCTTTTAGCGAGACCGGACATCCCGCTCCCTGACTaaag > 2:1325365/8‑286 (MQ=255)
ttgggaaGTGAACCAGCGGACCGCGCGGGGACGATTTTCTCGGTGTGAATGGCCAATAAACCAGGGTGGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGc < 2:1189490/282‑1 (MQ=255)
gcgaaGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGCGCAGCGGTAATCTCCTTTTCGAGGCTTTCATTTTCGCGAGTCCGGAGATTCCCCTCGCTGACTAATGCAt > 1:1590613/5‑288 (MQ=255)
gAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATccgaca < 1:1828545/287‑6 (MQ=255)
aaaCCAGCGAACCGCGCGGTGCCGATATTCTCGTGGGGAATGGCAAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACAGTGCGCGTAAACAAGTTCGGCTGCGACGAAACGTAAAATCCGGCACG‑CGATACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCACCTTCCAGTGCAGCGGTAATTGCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCTCTGACTAATGCATccgaca < 2:303871/286‑6 (MQ=255)
gTACGGGGCGGTGACGATTTACTCGTTGGAAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCAtt < 2:1403029/286‑1 (MQ=255)
gTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAAc < 1:1581896/289‑1 (MQ=255)
gTACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGATGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCAtt < 2:517657/286‑1 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCg > 1:1667242/1‑259 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:1012299/1‑286 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:56418/1‑286 (MQ=255)
tACCGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTa > 1:1531994/1‑286 (MQ=255)
ccGCGCGGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTg > 1:169349/1‑288 (MQ=255)
cgcgcgGTGACGATTTTCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGc > 1:677328/1‑289 (MQ=255)
ttttCTCGTTGTGAATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGcgtcgt < 2:1065277/288‑1 (MQ=255)
ttgtgaaTGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TTCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTgcgg > 1:398288/7‑286 (MQ=255)
aaTAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAg < 1:1359320/289‑1 (MQ=255)
cAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCt < 1:1637354/289‑1 (MQ=255)
gggTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCtcg > 1:1776822/1‑289 (MQ=255)
ttGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCtcgtc > 1:154761/1‑288 (MQ=255)
gggTGACATGGGCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGACGGGTGCGTCGAAACGTAAAATCCGGCACG‑CGAAACATACATGGCCTTTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCCGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTcgcg < 2:1535385/289‑1 (MQ=255)
gggTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑ATAGCCG‑AGGAGTTG‑TGCGCTAGTCGCAGCACGTACCCACCTTCCAGTGCAGCGGTAATTCCATTTTCGAGGCGTTCCTTTTCCCGAGACAGCAAATTCCCCTCGCTTACTAATGCCTCCGACACCCCATTCACTGCCAGCGTGACGCGTCGGCTGCGTCCGCTTTTCACGGCCTGCTcgccgc > 2:75072/1‑288 (MQ=255)
gggTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTcgcg > 2:804279/1‑289 (MQ=255)
cGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGaa < 2:1152439/289‑1 (MQ=255)
cGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGaa < 2:1601411/289‑1 (MQ=255)
cGTAATAACGAGTTGGAACATGGAGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGaa < 2:1254358/289‑1 (MQ=255)
aataaCGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAACCGTAAAATCCGGCACG‑CGAGACATACATCTCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACt < 1:148241/288‑1 (MQ=255)
aataaCGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAAt > 2:401179/1‑203 (MQ=255)
ataaCGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCg > 2:980172/1‑289 (MQ=255)
cgcgTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTa < 1:870313/289‑1 (MQ=255)
cgcgTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGGCGTCGGTTGGGTTCGATTTTCCCGGCGTTCTCGTCGCGCTGCCTTTCGAACTCGGtt > 2:1845164/1‑288 (MQ=255)
tGGAACATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCa > 1:1370621/1‑289 (MQ=255)
aaCATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATc < 1:1735539/288‑1 (MQ=255)
cATTGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACg < 1:1841988/289‑1 (MQ=255)
ttGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCa < 1:1071789/289‑1 (MQ=255)
ttGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCa < 1:600331/289‑1 (MQ=255)
tGCGCGTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGACAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCCCGATGCTGTTCGAACTCGGTTACAGCATCACGCag > 2:262256/1‑289 (MQ=255)
cgcgTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAAc > 2:402917/1‑267 (MQ=255)
cgcgTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCagag > 1:1165112/1‑289 (MQ=255)
gcgTAAACAAGGTCGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCagag < 2:56418/288‑1 (MQ=255)
cgactgcgtcgaaaCGTCAAGTCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATATTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGt < 2:1126433/277‑1 (MQ=255)
cGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGt < 1:1525421/289‑1 (MQ=255)
cGGCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGt < 1:128975/289‑1 (MQ=255)
ggCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGt < 2:677328/288‑1 (MQ=255)
ggCTGCGTCGAAACGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTg > 1:372746/1‑289 (MQ=255)
ctgcgtcgaaaCGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGgc > 1:844243/10‑289 (MQ=255)
gtcgaaaCGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCt > 2:86738/6‑288 (MQ=255)
cgaaaCGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACg < 1:804279/286‑1 (MQ=255)
gaaaCGTAACATCCGGCACG‑CTGGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTGTCGCGGGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCGGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACga < 1:316395/287‑1 (MQ=255)
gaaaCGTAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACga < 1:57922/287‑1 (MQ=255)
tAAAATCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCgaga > 2:662153/1‑128 (MQ=255)
aTCCGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACGAGAGCTTcgcg < 1:610466/289‑1 (MQ=255)
ccGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACGAGAGCTTCGCGCa < 2:372746/289‑1 (MQ=255)
ccGGCACG‑CGAGACATACATCGCCTGTTCAACC‑AT‑CGACGAGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCCGACACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACGAGAGCTTCGCGCa < 1:1572213/289‑1 (MQ=255)
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TGGCGTTTCTTAAAAATTGCTGCATAGTACGCACGGGAATACTCATCCCCAGCACGCCATACCAGTAGTTATTACTGTCTACCGGAACACTGACGGTAACCTGCGGTTCAGTATTGCTGGCGTGTTCCGGTTGGCTAGTGAACCAGCGTACCGCGCGGTGACGATTTTCTCGTTGACTATGGCCAATAAACCAGGGTTGGGTGACATAGCCGTAATAACGCGTTGGAACATTGCGCGTAAACAAGGTCGGCTGCGTGCTAACGTAAAATCCGGCACG‑GCTGACATACATCGCCTGTTCAACC‑AT‑GCTGCTGGAGTTG‑TGCGCTAGTCGCAGCAAGTAACCAACTTCCAGTGCAGCGGTAATTTCATTGTCGAGGCTTTCATTTTCGCGAGACAGGAGATTCCCCTCGCTGACTAATGCATCGCTCACACCATTAACTGGCAGAGTGCGTCGTCGGTTGAGTTCGATTTTCCAGGCGTGCTCGTCGCGATGCTGTTCGAACTCGGTTACAGCATCACGCAGAGAGGTGAAATCCAGTGGCGCTACGAGAGCTTCGCGCA > CP042583/1664674‑1665231
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
