Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,472,731 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,472,7310GC99.2% 857.2 / NA 365intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (179/183);  total (180/185)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,472,7320CG99.2% 844.9 / NA 365intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (178/184);  total (180/185)
Fisher's exact test for biased strand distribution p-value = 6.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,472,7330TA99.5% 861.8 / NA 365intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (177/184);  minor base C (2/0);  total (180/185)
Fisher's exact test for biased strand distribution p-value = 2.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 365 total aligned reads displayed.

TGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAAGCTCGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGACTCCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCGCTCTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGGCTATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTGCTACGTAAAACCGCCCGTCCATCACCCATTCGGCTATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGACTCATACCAG  >  CP042583/1472457‑1473011
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
  tCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACATGCATCAGCAACGCGCCTGGCTCCGCCGTTTCCCGATACCCTTGCGAATCGCTGGTgccct                                                                                                                                                                                                                                                                            >  2:2542306/1‑285 (MQ=255)
                cccATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCgg                                                                                                                                                                                                                                                             >  1:1248105/1‑289 (MQ=255)
                cccATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAAGCGCTGGTGAC‑GATACCTAACGCgggg                                                                                                                                                                                                                                                             >  2:518268/1‑289 (MQ=255)
                cccATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCACCGCGCCTGGCTCCGCCGTCTCCCCATACACTCGCCAATCGCTGGCGAC‑GATACTTAACGCGCgg                                                                                                                                                                                                                                                             >  1:2784320/1‑289 (MQ=255)
                  cATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCggg                                                                                                                                                                                                                                                            >  2:107323/1‑288 (MQ=255)
                    tGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGgtcg                                                                                                                                                                                                                                                         >  1:109529/1‑289 (MQ=255)
                         aaagcgggcggggggCCATTGGGGAATGAAGGGGGGGGTACGGGCGACAACATCGGTAAACCGGGGACGGGATTTGTGGTCAGCGTCTGGAGGATGGGACCAGGAATGACGAAGAGCAAAGTCAGCTAACTGACGAACCTGTGCCGACTCGCGGCGGTAGTAAAAAGGTTCGAAATGGCCAAAGCGCAGATGACTGGGGGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACGGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCgg                                                                                                                                                                                                                                                     <  2:2784320/274‑1 (MQ=255)
                         aaaGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGa                                                                                                                                                                                                                                                    <  1:107323/289‑1 (MQ=255)
                          aaGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGaa                                                                                                                                                                                                                                                   >  1:1362984/1‑289 (MQ=255)
                          aaGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGaa                                                                                                                                                                                                                                                   >  1:355154/1‑289 (MQ=255)
                          aaGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCCAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAAcgcg                                                                                                                                                                                                                                                                <  2:1701060/276‑1 (MQ=255)
                            gCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCCGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCCCGCCTGGCTCCGCCGTTTCCCGATACCCTGGCGAACTGCTGGTGTC‑CGTCCTTAACGCCCGGGTCCGCGGact                                                                                                                                                                                                                                                  >  2:662477/1‑286 (MQ=255)
                              cGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGc                                                                                                                                                                                                                                                <  2:2590847/288‑1 (MQ=255)
                              cGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCAGAAACAGCGCTAAACCTGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGc                                                                                                                                                                                                                                                <  2:2851403/288‑1 (MQ=255)
                                          aTTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCAt                                                                                                                                                                                                                                   <  2:957105/289‑1 (MQ=255)
                                                 aattaacgacgcgGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCa                                                                                                                                                                                                                            <  1:1155968/280‑1 (MQ=255)
                                                      acgacgaggTACGGGCGACAACATCGCTAAACCAGAGACAGTATTTATCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGTTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCGCACTGGc                                                                                                                                                                                                                       <  2:1140085/282‑1 (MQ=255)
                                                       cgacgcgGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCg                                                                                                                                                                                                                      <  1:2758993/286‑1 (MQ=255)
                                                                    gCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTa                                                                                                                                                                                                         >  1:570397/1‑289 (MQ=255)
                                                                    gCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTa                                                                                                                                                                                                         <  2:1028678/289‑1 (MQ=255)
                                                                         aacaTCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGtc                                                                                                                                                                                                    <  2:570397/289‑2 (MQ=255)
                                                                         aacaTCGCTAAAACAGCGACGGTATTTTTCCTCATCATCTGCAAGCAGTGACCATTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGtc                                                                                                                                                                                                    <  2:1630987/289‑2 (MQ=255)
                                                                                cTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGtcgaacgta                                                                                                                                                                                             >  1:1651012/1‑281 (MQ=255)
                                                                                        gagaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGTGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGGATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTtc                                                                                                                                                                                                              >  1:2604920/1‑264 (MQ=255)
                                                                                        gagaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCt                                                                                                                                                                                                                                                                                    >  1:1611318/1‑195 (MQ=255)
                                                                                        gagaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGcgt                                                                                                                                                                                                                                   >  1:533267/1‑241 (MQ=255)
                                                                                         agaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGccc                                                                                                                                                                                    >  1:2316305/1‑289 (MQ=255)
                                                                                          gaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCTCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGcc                                                                                                                                                                                     <  1:1015677/287‑1 (MQ=255)
                                                                                          gaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGcc                                                                                                                                                                                     <  2:109529/287‑1 (MQ=255)
                                                                                          gaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGcc                                                                                                                                                                                     <  1:609063/287‑1 (MQ=255)
                                                                                          gaCGGTATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAAACGCCCg                                                                                                                                                                                   >  1:238865/1‑289 (MQ=255)
                                                                                          gaCGGTATTTGTCCTCATCATCTACAAGATGTGCCCAGTAATGAAGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGccc                                                                                                                                                                                    <  2:238865/288‑1 (MQ=255)
                                                                                               tATTTGTCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACATGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCa                                                                                                                                                                               <  1:2542306/288‑1 (MQ=255)
                                                                                                     tCCTCATCATCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCa                                                                                                                                                                        >  1:3098628/1‑289 (MQ=255)
                                                                                                         catcatCTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTc                                                                                                                                                                     >  2:902308/1‑288 (MQ=255)
                                                                                                               cTGCAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCAt                                                                                                                                                                                                                                   >  2:2979629/1‑220 (MQ=255)
                                                                                                                  cAAGATGTGACCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCgcgaataag                                                                                                                                                            >  1:2729314/1‑280 (MQ=255)
                                                                                                                    agatgtgaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGccc                                                                                                                                                                                                                                              >  1:1768923/9‑204 (MQ=255)
                                                                                                                       tgtgaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACtt                                                                                                                                                                                                                                                                      >  2:2259092/6‑177 (MQ=255)
                                                                                                                       tgtgaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCgg                                                                                                                                                                                                                                                     <  1:3118373/189‑1 (MQ=255)
                                                                                                                       tgtgaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGt                                                                                                                                                        <  1:244339/282‑1 (MQ=255)
                                                                                                                          gaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCgaga                                                                                                                                                                                                                   <  2:2278748/223‑1 (MQ=255)
                                                                                                                          gaccAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAgg                                                                                                                                                    >  1:1504435/3‑288 (MQ=255)
                                                                                                                             catgaaTGACGAATAGCAAAGTCAGTTAACAGACGAAATTTTTCCGACTCGCAGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGGAGATGACGTGGTGCCACACCGATCAGCATCGCGCCTGGCTCCGCCGTGTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGGCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAg                                                                                                                                                <  2:2711130/285‑1 (MQ=255)
                                                                                                                                      ggAAGAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACGCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTc                                                                                                                                        <  2:1248105/287‑1 (MQ=255)
                                                                                                                                      cGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCa                                                                                                                                       <  1:325021/289‑1 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAAcgcg                                                                                                                                                                                                                                                                >  1:2050192/1‑164 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAAcgcg                                                                                                                                                                                                                                                                <  2:267464/164‑1 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAAcgcg                                                                                                                                                                                                                                                                <  2:2050192/164‑1 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGccc                                                                                                                                                                                                                                              >  1:851950/1‑182 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGc                                                                                                                                                                                                                                                >  1:2231642/1‑180 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGAt                                                                                                                                    >  2:2875754/1‑288 (MQ=255)
                                                                                                                                          tAGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGAt                                                                                                                                    >  1:433071/1‑288 (MQ=255)
                                                                                                                                           aGCAAAGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGc                                                                                                                                  <  1:1461418/289‑1 (MQ=255)
                                                                                                                                           aGCAAAGTCAGCTAACTGACAAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCTCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGc                                                                                                                                  <  1:2329036/289‑1 (MQ=255)
                                                                                                                                                aGTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTc                                                                                                                             <  1:2020625/289‑1 (MQ=255)
                                                                                                                                                 gTCAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGc                                                                                                                                                                                                                                                >  2:1495371/1‑173 (MQ=255)
                                                                                                                                                   cAGCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTcc                                                                                                                            <  1:776148/287‑1 (MQ=255)
                                                                                                                                                     gCTAACTGACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGccc                                                                                                                                                                                    >  1:957665/1‑229 (MQ=255)
                                                                                                                                                            gACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAGGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCa                                                                                                                                                                                                                                    <  1:1734780/174‑1 (MQ=255)
                                                                                                                                                            gACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGccc                                                                                                                                                                                                                                              >  1:2378851/1‑164 (MQ=255)
                                                                                                                                                            gACGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGccc                                                                                                                                                                                                                                              <  2:2378851/164‑1 (MQ=255)
                                                                                                                                                              cGAACCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTAGGCATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGCACGTAACACCGCCCGTCCAACACCCCTTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATTCCAGTCCATTGTaatcccc                                                                                                                >  2:1851862/1‑282 (MQ=255)
                                                                                                                                                                aaCCTTTTCCGACTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCg                                                                                                                                                                    >  1:2919296/1‑234 (MQ=255)
                                                                                                                                                                     tttccgcctcGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGCATAAGGCGTCAGGCCAGCACCGTTCAGATTCCAGTCCATTGTAGTGCCATCagcaa                                                                                                         >  1:929623/8‑288 (MQ=255)
                                                                                                                                                                      ttccgactcGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCagcaag                                                                                                        <  1:481037/282‑1 (MQ=255)
                                                                                                                                                                             tcGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTCTCCCGTATCGTCGCACGTAAAACCGCCCGTCCATCACCCATTCGCGAAGAAGGCGTCAGGCCAGCAACTTTCAGATTCCAGTCCATTGTAGTGTCATCCACAAGCA‑gttgtt                                                                                               >  1:82490/1‑289 (MQ=255)
                                                                                                                                                                               gcggcgGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCg                                                                                             <  1:517202/289‑1 (MQ=255)
                                                                                                                                                                                cggcggTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTTTAGTGCCATCAGACAGCA‑GTGGTTCg                                                                                             >  2:481037/1‑288 (MQ=255)
                                                                                                                                                                                           aaaaTGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATg                                                                                 <  1:2101539/289‑1 (MQ=255)
                                                                                                                                                                                                gTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGtc                                                                                                                                                                                                    >  1:2854529/1‑169 (MQ=255)
                                                                                                                                                                                                gTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCcgc                                                                             >  2:1333578/1‑288 (MQ=255)
                                                                                                                                                                                                gTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAAAGCCCAGATAAGGCATCGCCTCACTGGCGAGGCTTTCTCGTATCTACGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTCTCAGCGTACAGTCCAGTGTAGTTCCATCAGCAAGCG‑CGTGTTCGCCGAGAAAACTGcccc                                                                             >  2:2196607/1‑286 (MQ=255)
                                                                                                                                                                                                   cgcaaTGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCTCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATCCTTAACGCGCGGGTCGTCGGACGGCCCAGATAATGCCGCGCCTCACTGGCGATAGTGTCTCGTATCGTGCACAGTAAAACCGCCTGTCCATCACCCAACCTCGAATAAGGCGTCAGGCTTGCACCTTTCGGCTGCCAGTCCATTTTGTGGCCATCAGC‑CGCACGTTGTTCGCCGCGTAAAATGcctcccc                                                                          >  2:367700/4‑283 (MQ=255)
                                                                                                                                                                                                                    aGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCAt                                                                                                                                                                              <  2:1453844/172‑1 (MQ=255)
                                                                                                                                                                                                                              gTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCTTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAAAGCCGCGCCCATCACCCAGTGGGCCCGCCCCGACGc                                               >  2:722538/1‑288 (MQ=255)
                                                                                                                                                                                                                              gTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGcc                                                                                                                                                                                     <  1:2266256/155‑1 (MQ=255)
                                                                                                                                                                                                                                gCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTTTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCCCCCATCACCCAGTTGCCCCGCCCAgcacccga                                            >  2:1742609/1‑282 (MQ=255)
                                                                                                                                                                                                                                 ccACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAACACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGaa                                           <  1:1851862/289‑1 (MQ=255)
                                                                                                                                                                                                                                    cacGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGt                                                                                                                                                        <  2:845002/178‑1 (MQ=255)
                                                                                                                                                                                                                                    cacGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACtg                                        >  2:211335/1‑289 (MQ=255)
                                                                                                                                                                                                                                    cacGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTCCCATCAGCAAGCA‑GTTGTCACTCGAGTAAACTGCCGCGCCCATCACCCAGTTTGCGCGGCAAGCAGCCGCACt                                         >  2:2446220/1‑288 (MQ=255)
                                                                                                                                                                                                                                      cGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACtgat                                      <  1:2885551/289‑1 (MQ=255)
                                                                                                                                                                                                                                        cATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGc                                                                                                                                  <  2:1551204/196‑1 (MQ=255)
                                                                                                                                                                                                                                         ccgaggtgcccgcCTGGCCCCGCCGTTTCCCGATTCCCTGGCGAATCGCTGG‑GACAGATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTACTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGAc                                   <  2:335951/279‑1 (MQ=255)
                                                                                                                                                                                                                                         atcgtcATCCCGCCTGGCTCCGCCGGTTCCCGAATCACTGTCGAATCGCCGGTGAC‑GATACTGAGCGCGCGGGGCGTCGGAATGCGCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTACAACCGCCCGTCCATCACCCATTCGCGAATAATGCGTCAGGGCCGCACCGTTCCGATGCCAGTCCATTGTAGTGCCATCTGCAAGCA‑GTTGTTCGCCGAGTAAAATACCGCGACCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGAc                                   <  2:320752/284‑1 (MQ=255)
                                                                                                                                                                                                                                         aTCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCTTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGAc                                   <  1:722538/289‑1 (MQ=255)
                                                                                                                                                                                                                                         aTCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCAcc                                                                                                                                            <  1:1055946/185‑1 (MQ=255)
                                                                                                                                                                                                                                                 cgcgCCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTaa                           >  1:3058859/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   cgcCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCTCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCCTTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATCCCAGTCCATTGTAGTTCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAATTGGCCCGCCCAGACGCCGAACTGATGACCACTTTaaa                          >  1:1671248/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   cgcCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATTCCACTCCATTGTAGTGCCAGCAGCAAGCA‑GTTGTTCCCCGAGTAAAATGCCGCGCCCCACACCCAGTTGGCCCGCCCAGACCCCGAACCGGTTACCCCTTTaaa                          >  2:3048262/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   cgcCTGGCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGc                                                                                                                                  >  2:2328427/1‑185 (MQ=255)
                                                                                                                                                                                                                                                         gCTCCGCCGTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTgcg                    <  2:3098628/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            ccgccgTTTCCCGTGACACTGGCGAATCGCTGGTGAC‑GCTACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAg                <  2:755222/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             cgccgTTTCCCGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCa                                                                                                                                >  2:2732271/1‑177 (MQ=255)
                                                                                                                                                                                                                                                                      ccGATACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTggtgacata      <  1:2660391/289‑8 (MQ=255)
                                                                                                                                                                                                                                                                         aTACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCg                                                                                             <  2:1660733/199‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aTACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTCGAACGTAAAACCGCCCGTCCATCACCCATTCGCGAATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCg                                                                                             >  1:2182712/1‑199 (MQ=255)
                                                                                                                                                                                                                                                                          tACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCgag                                                                                                                                                                                                                    >  1:12149/1‑80 (MQ=255)
                                                                                                                                                                                                                                                                          tACACTGGCGAATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCgag                                                                                                                                                                                                                    <  2:12149/80‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
TGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAAGCTCGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGCAAGATGACTCCAGTAATGACGAATAGCAAAGTCAGCTAACTGACGAACCTTTTCGCTCTCGCGGCGGTAGTAAAAATGTTCGAAATGACCAAAGCGCAGATGACTTGGTGCCACACGCATCAGCATCGCGCCTGGCTCCGCCGTTTCCCGATACACTGGGCTATCGCTGGTGAC‑GATACTTAACGCGCGGGTCGTCGGAATGCCCAGATAATGCATCGCCTCACTGGCGAGACTTTCTCGTATCGTGCTACGTAAAACCGCCCGTCCATCACCCATTCGGCTATAAGGCGTCAGGCCAGCACCTTTCAGATGCCAGTCCATTGTAGTGCCATCAGCAAGCA‑GTTGTTCGCCGAGTAAAATGCCGCGCCCATCACCCAGTTGGCCCGCCCAGACGCCGAACTGATGACCACTGTAAACCTGCGCCAGTGGACTCATACCAG  >  CP042583/1472457‑1473011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A