Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,498,988 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,498,9880GC99.7% 796.2 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (177/159);  minor base T (1/0);  total (178/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,498,9890CG99.1% 787.4 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (176/158);  total (178/159)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,498,9900TA99.4% 797.8 / NA 337intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (176/159);  minor base C (2/0);  total (178/159)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

CATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTGCTCGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATTCTCCGCTAAGTGCG  >  CP042583/1498705‑1499264
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                  
           cTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCCCCGCATGGTCAATAGCCTGCCCATTCACCAGCCCCGCCGTCCACGTGACAATCCCAt                                                                                                                                                                                                                                                                      >  2:2822722/1‑289 (MQ=255)
              tCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTTCCCATTCACCAGCACCGTCGTCGACGTGACCACTCCATTGc                                                                                                                                                                                                                                                                   >  2:1714766/1‑289 (MQ=255)
              tCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAAt                                                                                                                                                                                                                                                                           >  1:50352/1‑281 (MQ=255)
                aaGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGa                                                                                                                                                                                                                                                                 <  1:986609/289‑1 (MQ=255)
                aaGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGa                                                                                                                                                                                                                                                                 <  1:2667245/289‑1 (MQ=255)
                     gCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAgg                                                                                                                                                                                                                                                             >  1:723737/1‑288 (MQ=255)
                        tAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTG‑CCATTCACCAGCGCCGTCGTCGACCTGACCATCCCATTTCGACAGGCCTc                                                                                                                                                                                                                                                         >  2:1852119/1‑288 (MQ=255)
                                cGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCATCTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATg                                                                                                                                                                                                                                                  >  1:324836/1‑288 (MQ=255)
                                cGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCCTCGCCGTGACAATCCCATTGCGACAGTCCTCGATaacg                                                                                                                                                                                                                                                  >  2:1978387/1‑286 (MQ=255)
                                cGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGAATGGTCAATAGCCTGCCCATTCACCAGCGCCTTCGTTGACGGATCAATCCCATTGCGAAAGACCCTGAAAATg                                                                                                                                                                                                                                                  >  2:2526876/1‑288 (MQ=255)
                                  tcgaataaGCTCCATGAGACGCAAATACTGACTGACAAGCTCCTGAGTAATTTGTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACCCCATGGCGGGTTAACCCCGGCAGAGCTGTCAGTGGCGTACCCATAGTAAGGACAAAGTGCATCCCTGTGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGAAAGGCCTCGATAATGCCg                                                                                                                                                                                                                                               <  2:899436/282‑1 (MQ=255)
                                   ccAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCg                                                                                                                                                                                                                                               <  1:1938115/288‑1 (MQ=255)
                                         aGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt                                                                                                                                                                                                                                        <  1:1083488/289‑1 (MQ=255)
                                                tGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAACGCCGTAGTTCGGACCttt                                                                                                                                                                                                                                 >  1:198246/1‑289 (MQ=255)
                                                   aaCGGAAATACGGACTGACAAGCTCCCGATTAATTTATTACAGCGGTAAAGCCTCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCAGCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCt                                                                                                                                                                                                                              <  2:2785484/289‑1 (MQ=255)
                                                    aCGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCtt                                                                                                                                                                                                                             <  2:2871647/289‑1 (MQ=255)
                                                         aaTACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGcc                                                                                                                                                                                                                        <  1:2754915/289‑1 (MQ=255)
                                                                actgacAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAatca                                                                                                                                                                                                                 >  1:1101636/1‑289 (MQ=255)
                                                                actgacAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAatca                                                                                                                                                                                                                 >  1:263518/1‑289 (MQ=255)
                                                                  tgacAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAAt                                                                                                                                                                                                                                                                           >  1:2365791/1‑229 (MQ=255)
                                                                          tCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTaa                                                                                                                                                                                                       <  1:2949915/289‑1 (MQ=255)
                                                                            cTGAGTAATTTCTGCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCCTTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACa                                                                                                                                                                                                     <  1:77697/289‑1 (MQ=255)
                                                                                gTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATc                                                                                                                                                                                                  <  1:2246717/288‑1 (MQ=255)
                                                                                gTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATc                                                                                                                                                                                                  <  1:2906077/288‑1 (MQ=255)
                                                                                  aaTTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGt                                                                                                                                                                                               <  2:586139/289‑1 (MQ=255)
                                                                                      tcttcCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc                                                                                                                                                                                           >  1:131913/1‑289 (MQ=255)
                                                                                         tcCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGTATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGtt                                                                                                                                                                                        <  2:1039139/289‑1 (MQ=255)
                                                                                         tcCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGtt                                                                                                                                                                                        <  1:2186710/289‑1 (MQ=255)
                                                                                         tcCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGtt                                                                                                                                                                                        <  1:430802/289‑1 (MQ=255)
                                                                                                 tAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAAt                                                                                                                                                                                 <  2:2159417/288‑1 (MQ=255)
                                                                                                 tAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGGCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAAt                                                                                                                                                                                 <  2:2424210/288‑1 (MQ=255)
                                                                                                  aaaGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCAtt                                                                                                                                                                                                         <  2:1428401/263‑1 (MQ=255)
                                                                                                           tcttctGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCg                                                                                                                                                                                                                                               >  2:2974200/1‑216 (MQ=255)
                                                                                                           tcttctGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGtt                                                                                                                                                                      >  2:1904626/1‑289 (MQ=255)
                                                                                                                 gCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAAtgtg                                                                                                                                                                <  1:1402534/289‑1 (MQ=255)
                                                                                                                 gCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAAtgtg                                                                                                                                                                <  1:795989/289‑1 (MQ=255)
                                                                                                                  ccAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCAtt                                                                                                                                                                                                         >  2:2392764/1‑247 (MQ=255)
                                                                                                                  ccAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCAtt                                                                                                                                                                                                         <  1:2392764/247‑1 (MQ=255)
                                                                                                                      cTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCa                                                                                                                                                                                                           <  2:498552/241‑1 (MQ=255)
                                                                                                                         ccAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGAc                                                                                                                                                                                                                                                                <  2:2112875/185‑1 (MQ=255)
                                                                                                                         ccAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGAc                                                                                                                                                                                                                                                                >  1:2112875/1‑185 (MQ=255)
                                                                                                                           aGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAg                                                                                                                                                      <  2:696064/289‑1 (MQ=255)
                                                                                                                                 aTTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc                                                                                                                                                                                           >  2:2362193/1‑246 (MQ=255)
                                                                                                                                       ccAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCa                                                                                                                                          <  2:2664093/289‑1 (MQ=255)
                                                                                                                                                     cgGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTg                                                                                                                            >  1:1060385/1‑289 (MQ=255)
                                                                                                                                                      gggTTAACCCTGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAATTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCAACGCATGCTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACTATCCCATTGCGACAGGCCTCGATAAAGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTgg                                                                                                                           <  1:1045350/289‑1 (MQ=255)
                                                                                                                                                            aCCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGAc                                                                                                                                                                                                                                                                              <  2:2223800/136‑1 (MQ=255)
                                                                                                                                                                cGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTtc                                                                                                                 <  1:2297351/289‑1 (MQ=255)
                                                                                                                                                                  gCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGGCTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGc                                                                                                                                                                             <  2:358586/227‑1 (MQ=255)
                                                                                                                                                                                     aCCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAg                                                                                                                                                      >  1:860570/1‑231 (MQ=255)
                                                                                                                                                                                           aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGcc                                                                                      >  1:2806343/1‑289 (MQ=255)
                                                                                                                                                                                           aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGc                                                                                       >  2:836567/1‑288 (MQ=255)
                                                                                                                                                                                           aGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAAGCAGTAAGCGTTCCATAATCAGCCTCGGTTAAtgtg                                                                                                                                                                >  2:2733106/1‑215 (MQ=255)
                                                                                                                                                                                                 gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCt                                                                                                                                                                                                                                        >  2:1230505/1‑137 (MQ=255)
                                                                                                                                                                                                 gACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCCCATGGTCAATAGCCTGCCCATTCCCCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCCATAATGCCGTAGTTCTTACCTTTACTTACGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATTTGCTTTTTGAAGCCCTGCGATGCAGTCGGCAAAGTTTGGCAGCCTTTTTCCGTCCGCCACAAGCACCCCGCGCGCcagcac                                                                                 >  2:3009223/1‑287 (MQ=255)
                                                                                                                                                                                                    aaaGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCa                                                                             >  1:2020721/1‑289 (MQ=255)
                                                                                                                                                                                                            tCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGc                                                                                                                                                                                           <  2:1374649/171‑1 (MQ=255)
                                                                                                                                                                                                              ccTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGAt                                                                   <  1:3105818/289‑1 (MQ=255)
                                                                                                                                                                                                               cTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATc                                                                  >  1:2844186/1‑289 (MQ=255)
                                                                                                                                                                                                                  tGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTTCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGa                                                               >  1:1264703/1‑289 (MQ=255)
                                                                                                                                                                                                                  tGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGa                                                               >  2:3080452/1‑289 (MQ=255)
                                                                                                                                                                                                                       aGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGc                                                           >  1:1953641/1‑288 (MQ=255)
                                                                                                                                                                                                                        gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAAtgtg                                                                                                                                                                <  2:1300292/186‑1 (MQ=255)
                                                                                                                                                                                                                        gACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGct                                                                                                                                                    >  1:3174135/1‑198 (MQ=255)
                                                                                                                                                                                                                         aCTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTTCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTTCGCCAGAATCATCTCGCGTTCCAGCAGCCCAGCATCCCCATCGGCATGccc                                                         >  2:1505102/1‑286 (MQ=255)
                                                                                                                                                                                                                         aCTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGcccc                                                        >  1:3090716/1‑289 (MQ=255)
                                                                                                                                                                                                                         aCTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCAcc                                                        >  1:143942/1‑289 (MQ=255)
                                                                                                                                                                                                                          ttCGGTTTATCCAGCCTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGGTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCa                                                       <  2:1101636/288‑1 (MQ=255)
                                                                                                                                                                                                                           tCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCaa                                                      <  1:1505102/289‑1 (MQ=255)
                                                                                                                                                                                                                              gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAAt                                                                                                                                                                                 >  2:1085263/1‑163 (MQ=255)
                                                                                                                                                                                                                              gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCgg                                                                                                                                     >  2:411736/1‑207 (MQ=255)
                                                                                                                                                                                                                              gTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCt                                                                               <  1:1862130/261‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTtctc                                                                                                               <  2:2635846/218‑1 (MQ=255)
                                                                                                                                                                                                                                           caacgccACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAgc                                      <  1:1714766/283‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCg                                                                                                                                                                                                                                               >  2:433631/1‑87 (MQ=255)
                                                                                                                                                                                                                                            aaCTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAgc                                      >  1:2419481/1‑288 (MQ=255)
                                                                                                                                                                                                                                              cTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCCTCCCGATCGGAATGCACCAACGGACTAAGTTTTAgccc                                    >  2:3169109/1‑286 (MQ=255)
                                                                                                                                                                                                                                                   ccGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAgcgc                                    <  1:598736/283‑1 (MQ=255)
                                                                                                                                                                                                                                                    cGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAgc                                      >  1:1227246/1‑280 (MQ=255)
                                                                                                                                                                                                                                                     gaaTGATCAAATGCCTGCCCATTCCCCGGCGCCTCCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAaca                            <  2:131913/287‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAaca                            <  1:394798/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccacagTCAATCGCCTACCCATTCACCAGCGCCGTCGTCCACGTGACATACCCATTGCGACATGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTACGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAaca                            <  2:3195749/284‑1 (MQ=255)
                                                                                                                                                                                                                                                      cATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATc                                                                                                                                                                                                  <  1:638187/122‑1 (MQ=255)
                                                                                                                                                                                                                                                      cATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATc                                                                                                                                                                                                  >  2:638187/1‑122 (MQ=255)
                                                                                                                                                                                                                                                      cATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAacac                           >  1:2656043/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              aTAGCCTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTaa                   >  1:464751/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  ccTGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCAt                                                                         <  2:777629/231‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tgaccATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGAt                                                                   <  2:1749187/232‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tGCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGAc                                                 >  1:936111/1‑253 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCTGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGaa                                                              <  2:1560157/239‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCTGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGaa                                                              >  1:1560157/1‑239 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCAtct                                                                                              >  1:2992792/1‑207 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCAtct                                                                                              >  1:1813146/1‑207 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCcag                                                                                    >  2:2248639/1‑217 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGAt                                                                   <  2:96381/234‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGCCTAAGGTTTAGCGCCAGTAACACATCGTTAAATtct              >  2:2054538/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATtctc             >  2:2904540/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gCCCATTCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATtct              <  1:2054538/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tCACCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATTCTCCGCTAAg      >  1:2506911/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             aCCAGCGCCGTCGTCGACGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCTTAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATTCTCCGCTAAGTg    <  2:1462351/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                  
CATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAACTGCCAGATCCATTTTCCCAGCACACCATCGCGGGTTAACCCCGGCATAGCTGTCAGTGGCTTACCCATAGTAAGGACAAAGTGCATCCCTATGGCCAGACTCGGTTCATCACGACTCAACTGCACCGCATGGTCAATAGCCTGCCCATTCACCAGCGCCGTCGTGCTCGTGACAATCCCATTGCGACAGGCCTCGATAATGCCGTAGTTCTGACCTTTGCTTAAGCCAAAATCATCGGCATTAACAATCAGTAAGCGTTCCATAATCAGCCTCGGTTAATGTGCTTTTTTAAGCTCTGCGATGCAGTCGGCAAAGTTTGGCAGCCATTTCTCGTGCGCCAGAATCATCTCGCGTGCCAGCAGCTCAGCATCGCGATCGGAATGCACCAACGGACTAAGGTTTAGCGCCAGTAACACATCGTTAAATTCTCCGCTAAGTGCG  >  CP042583/1498705‑1499264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A