Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,525,564 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,525,5640AT99.5% 850.6 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base T (176/183);  total (177/186)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
*CP0425831,525,5650GC99.2% 853.7 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (176/183);  total (177/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,525,5660CG98.9% 850.2 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base G (175/184);  total (177/186)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

AGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACAAGCGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCT  >  CP042583/1525288‑1525838
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                 
  ccGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCCGCCAATGCTGGTGGCGTCGCTACATCCGG‑CCTGGAAATg                                                                                                                                                                                                                                                                      >  2:2985251/1‑289 (MQ=255)
                                         tctggtctATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGaa                                                                                                                                                                                                                                <  2:1356930/288‑1 (MQ=255)
                                                   ctcGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCAc                                                                                                                                                                                                                     >  1:2750912/1‑289 (MQ=255)
                                                     cGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGt                                                                                                                                                                                                                   <  1:3105963/289‑1 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATg                                                                                                                                                                                                                                                                      <  1:920473/236‑1 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCt                                                                                                                                                                                                                                                          >  2:701919/1‑248 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCt                                                                                                                                                                                                                                                          <  1:701919/248‑1 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCgaga                                                                                                                                                                                                                                 <  1:419769/273‑1 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCgaga                                                                                                                                                                                                                                 >  2:419769/1‑273 (MQ=255)
                                                       aaGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGttt                                                                                                                                                                                                                 >  2:1526490/1‑289 (MQ=255)
                                                           ccAACAGCCGTGGTCTCTACCGGTTTATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGca                                                                                                                                                                                                              <  1:7495/288‑1 (MQ=255)
                                                            cAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCCCAAAACGCTGCGCGCCTGGGCTGGAAAGGCGGGCAAGGTGACGCACGGTTGgat                                                                                                                                                                                                             >  2:2586230/1‑288 (MQ=255)
                                                              aCAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGGAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCCCAAAACGACGCGCGCGTGGGCTGGAAAGCCGAGAAAGTTGGCGACAGTTTGaatcac                                                                                                                                                                                                          >  2:2717680/1‑289 (MQ=255)
                                                                     tGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTTCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCCCGTTTGcatccactcat                                                                                                                                                                                                     >  2:1096749/1‑280 (MQ=255)
                                                                      ggttcctACCGGTTGCTATCGCCCTGCCTGGCGCCACCCAGGATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCt                                                                                                                                                                                                  <  2:1511112/284‑1 (MQ=255)
                                                                      ggTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGc                                                                                                                                                                                                   <  1:2314262/288‑1 (MQ=255)
                                                                      ggTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCt                                                                                                                                                                                                  <  1:2581358/289‑1 (MQ=255)
                                                                           caaCCGGTTGATATGGCCAGGCCTTGCGCACCCCAGGATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGata                                                                                                                                                                                             <  2:2890977/287‑1 (MQ=255)
                                                                                   tGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATccacca                                                                                                                                                                                      <  1:2150236/288‑1 (MQ=255)
                                                                                    gATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCAt                                                                                                                                                                                     >  1:1595566/1‑288 (MQ=255)
                                                                                      tatCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGc                                                                                                                                                                                                   >  2:1082730/1‑272 (MQ=255)
                                                                                      tatCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGc                                                                                                                                                                                   <  1:2529973/288‑1 (MQ=255)
                                                                                      tatCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGc                                                                                                                                                                                   <  2:2236693/288‑1 (MQ=255)
                                                                                      tatCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCCGCGCGCCTGGGCTGGAAAGCGGAGAAAGTTGACGCACGTTTGCATCACACCACGCTGGATATccacccttc                                                                                                                                                                                   >  2:1919021/1‑284 (MQ=255)
                                                                                           cccTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATACGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTgtgt                                                                                                                                                                             >  1:1741217/1‑289 (MQ=255)
                                                                                               gCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAg                                                                                                                                                                         <  1:1096749/289‑1 (MQ=255)
                                                                                                ccTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGc                                                                                                                                                                                                   >  2:2062398/1‑262 (MQ=255)
                                                                                                ccTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGc                                                                                                                                                                                                   <  1:2062398/262‑1 (MQ=255)
                                                                                                  ttGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCAt                                                                                                                                                                      <  1:2700302/289‑1 (MQ=255)
                                                                                                          cccAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACCAAACGCTGCGCGCCTGGGCCGGACAGCCGAGAAAGTTGACGCCCGTTTGCGTCACATCCTGCGGGTGTGCCCCCACTCCCGTGTTTGGCATGggggtgt                                                                                                                                                              >  2:17602/1‑288 (MQ=255)
                                                                                                          cccAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCAt                                                                                                                                                                      >  1:2364809/1‑281 (MQ=255)
                                                                                                          cccAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCAt                                                                                                                                                                      <  1:170431/281‑1 (MQ=255)
                                                                                                            cAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAg                                                                                                                                                            <  1:1564170/289‑1 (MQ=255)
                                                                                                               aaTGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGcatcaca                                                                                                                                                                                                         <  1:886953/241‑1 (MQ=255)
                                                                                                               aaTGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGcatcaca                                                                                                                                                                                                         >  2:886953/1‑241 (MQ=255)
                                                                                                                 tGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAg                                                                                                                                                       <  2:843326/289‑1 (MQ=255)
                                                                                                                 tGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAg                                                                                                                                                       <  1:1515460/289‑1 (MQ=255)
                                                                                                                    aCTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGc                                                                                                                                                                                                   >  2:3162858/1‑242 (MQ=255)
                                                                                                                      tGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATccac                                                                                                                                                                                        >  1:1664070/1‑251 (MQ=255)
                                                                                                                         aTGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCCCGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTTAGCCTGGGGGGCAAGGTGAGCAAACCaa                                                                                                                                               >  2:1435012/1‑289 (MQ=255)
                                                                                                                                     cgcATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCCCCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACCCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGGGCAAACAAACTACGTCCAggg                                                                                                                                   >  2:1224349/1‑289 (MQ=255)
                                                                                                                                             cTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGata                                                                                                                                                                                             >  1:1798527/1‑223 (MQ=255)
                                                                                                                                              ttATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑GCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGaa                                                                                                                             <  1:2856377/286‑1 (MQ=255)
                                                                                                                                               tATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACAtt                                                                                                                         >  2:738343/1‑289 (MQ=255)
                                                                                                                                                     tAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGt                                                                                                                   <  1:249953/289‑1 (MQ=255)
                                                                                                                                                      aaTGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGt                                                                                                                                                                                                                   <  2:2528934/192‑1 (MQ=255)
                                                                                                                                                      aaTGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCAtggtgg                                                                                                                                                                 <  1:1935569/242‑1 (MQ=255)
                                                                                                                                                       aTGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGcatcacat                                                                                                                                                                                                        <  2:172589/202‑1 (MQ=255)
                                                                                                                                                       aTGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGgtt                                                                                                                 >  1:2283474/1‑289 (MQ=255)
                                                                                                                                                            gTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCt                                                                                                                                                                                                  >  2:2793166/1‑203 (MQ=255)
                                                                                                                                                            gTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCt                                                                                                                                                                                                  <  1:2793166/203‑1 (MQ=255)
                                                                                                                                                            gTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGa                                                                                                            >  1:1151671/1‑289 (MQ=255)
                                                                                                                                                             ttAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCAc                                                                                                                                                                                                                     >  1:3185955/1‑183 (MQ=255)
                                                                                                                                                              tAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGaa                                                                                                           <  1:2912499/288‑1 (MQ=255)
                                                                                                                                                               aaaGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCAcatcat                                                                                                                                                                                                     >  1:816535/1‑197 (MQ=255)
                                                                                                                                                                        gCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCcgatg                                                                                                <  2:2126362/289‑1 (MQ=255)
                                                                                                                                                                                   aaaTATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGgcg                                                                                     <  2:2750912/289‑1 (MQ=255)
                                                                                                                                                                                         gCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCt                                                                                                                                                                                                                                                          <  1:49844/118‑1 (MQ=255)
                                                                                                                                                                                          ccGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATccac                                                                                                                                                                                        <  1:2015334/183‑1 (MQ=255)
                                                                                                                                                                                          ccGACAACCATAGAGGCGACTGAACGGTTACAGAAGGCAGGCTTACTATTTGCGCTGGGTAAAGTGGCTAATGCTGGTGGCGTCGCTA‑AATCGGTACTGGAAGTGGCACAAAACGCTGCGTGCCTGGGGTGGAAAGTGGAGAAAGCTGACGCACGTTTGGATCAAATCATGCTGGAGAACCACCATGTCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGAGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGgt                                                                               <  2:1972682/288‑1 (MQ=255)
                                                                                                                                                                                           cGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGgtgt                                                                             >  2:2663421/1‑289 (MQ=255)
                                                                                                                                                                                                  caTCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTaa                                                                      >  1:3088528/1‑289 (MQ=255)
                                                                                                                                                                                                            aCTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGGGAAGGTTGCCTGTGCGATGCCGGCGCCGGGGGTGATTTTAGTTTTAAAt                                                             >  2:93967/1‑288 (MQ=255)
                                                                                                                                                                                                                 aCTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGa                                                       <  1:1224349/289‑1 (MQ=255)
                                                                                                                                                                                                                     ttCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCAtg                                                                                                                                                                     <  2:1670909/175‑1 (MQ=255)
                                                                                                                                                                                                                            aggcaggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGTGCTACg                                             <  1:2180875/288‑1 (MQ=255)
                                                                                                                                                                                                                             ggcaggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGACTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGc                                                                                                     <  1:784640/231‑1 (MQ=255)
                                                                                                                                                                                                                               caggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAAc                                                                                                                                                  <  1:1071644/184‑1 (MQ=255)
                                                                                                                                                                                                                               caggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAAc                                                                                                                                                  >  2:473913/1‑184 (MQ=255)
                                                                                                                                                                                                                               caggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAAc                                                                                                                                                  <  1:473913/184‑1 (MQ=255)
                                                                                                                                                                                                                               caggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCa                                                                                                                                                <  1:1464863/186‑1 (MQ=255)
                                                                                                                                                                                                                               caggcGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGa                                                       >  1:1258081/1‑275 (MQ=255)
                                                                                                                                                                                                                                   cgaaCTATTTGCCACGGGTAGAGCGGCGAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATc                                       <  2:1699754/284‑1 (MQ=255)
                                                                                                                                                                                                                                          tttGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCcgatgc                                                                                               <  2:801973/224‑1 (MQ=255)
                                                                                                                                                                                                                                          tttGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGgt                                                                               <  1:373908/240‑1 (MQ=255)
                                                                                                                                                                                                                                            tGCACCGGGTAAAGCGGCTAATGCTGGTTGCGCCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTTACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGGTTTGAGAAGGTGGCCGATGCGATGCCGGCGCCGGGTGTGGATTAAGGTGTAAATGCCTGATGGTGTCACGCTTATCAGGGCTAaaaa                            >  2:1394742/1‑289 (MQ=255)
                                                                                                                                                                                                                                             gCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAAt                           <  1:2663421/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aCCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCtgtg                                                                                                                                                                              <  2:1168634/140‑1 (MQ=255)
                                                                                                                                                                                                                                                  gggTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAg                                                                                                                                                       >  2:1837255/1‑160 (MQ=255)
                                                                                                                                                                                                                                                  gggTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACt                                                                                                                                             <  1:539985/170‑1 (MQ=255)
                                                                                                                                                                                                                                                  gggTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACt                                                                                                                                             >  2:539985/1‑170 (MQ=255)
                                                                                                                                                                                                                                                  gggTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGc                                                           <  1:1317609/252‑1 (MQ=255)
                                                                                                                                                                                                                                                  gggTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGgcg                                                  <  2:237004/261‑1 (MQ=255)
                                                                                                                                                                                                                                                  ggatAAGGCGGCGAAGCCTGTTGGCGTCGCTACATCGGG‑CCTGGCAATGGCCCAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGca                      <  2:2283474/286‑1 (MQ=255)
                                                                                                                                                                                                                                                    gTAAAGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGAGCAGGGCGCGGACATTGCCGGTTGTGTGAAGGGTGCCGATGCGATGCTGGCGCAGGGTGTGACTGAAg                                                                     >  2:373908/1‑240 (MQ=255)
                                                                                                                                                                                                                                                        aGCGGCTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAg                                                                                                                                                       >  1:1682669/1‑154 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAAc                                                                                                                                                  <  2:491592/154‑1 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGgcgc                                                                                    >  2:311494/1‑216 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGca                      <  1:1000858/278‑1 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGca                      >  2:1000858/1‑278 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTg            >  1:1554642/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTg            >  2:2304340/1‑288 (MQ=255)
                                                                                                                                                                                                                                                             cTAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGc           >  1:2988807/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tAATGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCAt              >  1:2597768/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                 tGCTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGtt       <  1:24413/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cTGGTGGCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTa      <  2:1622639/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggtggCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGgcgc                                                                                    >  1:3156516/1‑208 (MQ=255)
                                                                                                                                                                                                                                                                      gtggCGTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGgcg                                                                                     <  1:1395816/206‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gTCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACg                                             >  2:1248372/1‑241 (MQ=255)
                                                                                                                                                                                                                                                                            tCGCTACATCGGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCCGTTa      >  2:2180284/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                 
AGCCGCGATGGTCGAGTGGCAGATTACGCCAAAGAATTTGGTCTGGTCTATCTCGAAGGCCAACAGCCGTGGTCTCTACCGGTTGATATCGCCCTGCCTTGCGCCACCCAGAATGAACTGGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCGTCGCCGAAGGGGCAAATATGCCGACCACCATCGAAGCGACTGAACTGTTCCAGCAGGCAGGCGTACTATTTGCACCGGGTAAAGCGGCTAATGCTGGTGGCGTCGCTACAAGCGG‑CCTGGAAATGGCACAAAACGCTGCGCGCCTGGGCTGGAAAGCCGAGAAAGTTGACGCACGTTTGCATCACATCATGCTGGATATCCACCATGCCTGTGTTGAGCATGGTGGTGAAGGTGAGCAAACCAACTACGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCT  >  CP042583/1525288‑1525838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A