Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,528,132 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,528,1320AT99.5% 1023.0 / ‑4.3 428intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (216/209);  minor base C (1/1);  total (218/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01
*CP0425831,528,1330CG99.5% 1013.2 / NA 428intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (216/208);  total (218/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,528,1340TA99.8% 1022.3 / NA 428intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (215/210);  total (218/210)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 428 total aligned reads displayed.

ATGGCGTGGTGCGCATCGACCTTTTTGTCATCCCAACAGCGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCACTAAGGCTAAAAGGCAGCGGCGCGGATTCACTTTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGGCGCACCACCAGCCC  >  CP042583/1527866‑1528407
                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                 
       ggtgCGCATCGACCTTTTTGTCATCCCAACAGCGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCAAAAAAGGCAGCGGCGCGGAtt                                                                                                                                                                                                                                                         <  1:2673310/288‑1 (MQ=255)
                   ccTTTTTGTCATCCCAGAGGCGGTTGCGTATATCTTGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCCTTCATCACCGCCTGGCGTCAGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGttt                                                                                                                                                                                                                                            <  2:1326293/289‑1 (MQ=255)
                   ccTTTTTGTCATCCCAACAGCGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAACACGTTTTGCCGCTTCAATCTGCAACTCTGCAAGCGAAAAAGTCAGCGCCCCGGATTCCGATTCCCGttt                                                                                                                                                                                                                                            >  2:3073500/1‑289 (MQ=255)
                   ccTGTTTGTCATCGCAACAGCGTTTGCGTATATCTGGATCTACCACTGGCTGCGGAAACAGATCCGGTGCATGAACACTGATGGCATTCATAACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGttt                                                                                                                                                                                                                                            <  2:3173394/289‑1 (MQ=255)
                             aTCCCAACAGCGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGttt                                                                                                                                                                                                                                            >  1:874735/1‑279 (MQ=255)
                                       cGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGGTGGTGACaa                                                                                                                                                                                                                        >  1:660386/1‑289 (MQ=255)
                                           tccGTGTAACTGGATCTCCCACTGGCTGCGGGAACGGATCCGGTGCATGGACACTGAGGGGCTTCATCAGCGCGTGGGGTCCGGCAAAATGTTCTCATGGCAAATAGCGACAATCAGAACGCGGATAAGCGATTAGCTTGTGCGTTTGGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACGAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGc                                                                                                                                                                                                                    <  2:1752479/287‑1 (MQ=255)
                                            gCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGcc                                                                                                                                                                                                                   >  2:1488820/1‑289 (MQ=255)
                                                atatCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGtt                                                                                                                                                                                                               <  1:1488820/289‑1 (MQ=255)
                                                       gATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACt                                                                                                                                                                                                        >  1:831577/1‑289 (MQ=255)
                                                       gATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACt                                                                                                                                                                                                        >  1:2838981/1‑289 (MQ=255)
                                                       gATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACt                                                                                                                                                                                                        >  1:2540896/1‑289 (MQ=255)
                                                            aCCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTta                                                                                                                                                                                                                                     <  2:2735536/255‑1 (MQ=255)
                                                            aCCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTgg                                                                                                                                                                                                                              <  2:830613/262‑1 (MQ=255)
                                                            aCCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGc                                                                                                                                                                                                   >  1:1949923/1‑289 (MQ=255)
                                                             ccACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGTTGACAATAGTCGGTTGACCAATAATggg                                                                                                                                                                                                  >  2:674735/1‑287 (MQ=255)
                                                               aCTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGt                                                                                                                                                                                                <  1:332461/289‑1 (MQ=255)
                                                                 tGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTta                                                                                                                                                                                                                                     >  1:2953997/1‑250 (MQ=255)
                                                                  ggCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTa                                                                                                                                                                                              >  1:2390579/1‑288 (MQ=255)
                                                                   gCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTaa                                                                                                                                                                                             >  1:504051/1‑288 (MQ=255)
                                                                      gCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTg                                                                                                                                                                                                                               >  1:2509156/1‑251 (MQ=255)
                                                                       cGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGAc                                                                                                                                                                                                            <  1:814001/269‑1 (MQ=255)
                                                                                      tGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTgg                                                                                                                                                                          <  2:743382/288‑1 (MQ=255)
                                                                                       ggtggacacctctgggCATTCATCCCCGGGTGCAGTCCGGCAAAATGTGCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTATTCGAACTCAGACCAAAACGTTTGGCCGATTCAATCTGCAACGCTGAAAGCGCAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGa                                                                                                                                                                         <  2:23371/274‑1 (MQ=255)
                                                                                        cATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCCCTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAACGCGAAAAAGGCAGCGGCGCGGCTTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGTATACTAATGCGGTTAACTACTTGCTCCGCCAGCgg                                                                                                                                                                          >  2:2694224/1‑286 (MQ=255)
                                                                                          tGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTg                                                                                                                                                                                                                               <  2:2815045/231‑1 (MQ=255)
                                                                                          tGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGAt                                                                                                                                                                     >  1:2708490/1‑289 (MQ=255)
                                                                                                cTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGAc                                                                                                                                                                                                            >  2:2378446/1‑244 (MQ=255)
                                                                                                  gATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGAc                                                                                                                                                                        <  2:2008650/278‑1 (MQ=255)
                                                                                                  gATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAg                                                                                                                                                             <  1:917412/289‑1 (MQ=255)
                                                                                                  gATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAg                                                                                                                                                             <  1:1914867/289‑1 (MQ=255)
                                                                                                   aTGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGttt                                                                                                                                                                                                                                            <  2:1968022/209‑1 (MQ=255)
                                                                                                   aTGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTta                                                                                                                                                                                                                                     >  1:20672/1‑216 (MQ=255)
                                                                                                   aTGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGa                                                                                                                                                                         >  1:754856/1‑276 (MQ=255)
                                                                                                    tGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAgcg                                                                                                                                                           <  1:1345053/289‑1 (MQ=255)
                                                                                                       cATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTg                                                                                                                                                                           >  2:1601932/1‑270 (MQ=255)
                                                                                                       cATTCATCAACGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTAAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGcc                                                                                                                                                         <  1:402531/288‑1 (MQ=255)
                                                                                                           catcaCCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCcttct                                                                                                                                                    >  2:1181501/1‑289 (MQ=255)
                                                                                                            atcaCCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCcttctt                                                                                                                                                   <  2:774266/289‑1 (MQ=255)
                                                                                                            atcaCCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATCCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACCTGCTCCGCCAGTGGACGATGTAACACGCGCcctcct                                                                                                                                                    >  2:2515429/1‑288 (MQ=255)
                                                                                                             tcaCCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCttcttc                                                                                                                                                  >  1:2287808/1‑289 (MQ=255)
                                                                                                             tcaCCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGACCttcttc                                                                                                                                                  >  2:2135853/1‑289 (MQ=255)
                                                                                                             tcaCCGCGTGGCGTCCGGCAAAATGTACTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCg                                                                                                                                                                                                  <  2:641939/241‑1 (MQ=255)
                                                                                                                 cgcgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGa                                                                                                                                                                                                                           >  2:821002/1‑212 (MQ=255)
                                                                                                                 cgcgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCcttctt                                                                                                                                                   <  2:1394208/284‑1 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTaa                                                                                                                                                                                                      >  2:3035489/1‑231 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATg                                                                                                                                                                                                    <  1:731916/233‑1 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTc                                                                                                                                                                                   >  2:1533585/1‑250 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGa                                                                                                                                                                         >  1:2617571/1‑260 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGa                                                                                                                                                                      >  1:1993986/1‑263 (MQ=255)
                                                                                                                   cgTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTg                                                                                                                                            >  1:2451745/1‑289 (MQ=255)
                                                                                                                     tGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGt                                                                                                                                          >  1:1632595/1‑289 (MQ=255)
                                                                                                                     tGGCGTCCGCCAAAATGTTCTCCTGGCAAATAACGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCTCTCAGACCAAAACGTTTTCCCGCTTCAATCTGCACGTCTCATCGCGAAAAAGGCAGCGGCCCGGATTCTGATTCCCGTTTATCGTTATCGCTGGTGACAATAGCCGGTTGACTACTAATGCGGTTAACCACATGCTCCGCCACTGGACGATACACCAAGCGCCCTTCTTCACCCTGGt                                                                                                                                          >  2:1250579/1‑289 (MQ=255)
                                                                                                                      ggCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGAc                                                                                                                                                                                                            >  1:615015/1‑222 (MQ=255)
                                                                                                                      ggCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGt                                                                                                                                          >  1:3053701/1‑288 (MQ=255)
                                                                                                                        cGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACTACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACg                                                                                                                                       >  1:155954/1‑289 (MQ=255)
                                                                                                                        cGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTAc                                                                                                                                        <  1:160673/288‑1 (MQ=255)
                                                                                                                                       tcttctGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTAc                                                                                                                                        >  1:1779888/1‑273 (MQ=255)
                                                                                                                                         ttctGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTc                                                                                                                      <  2:1000585/289‑1 (MQ=255)
                                                                                                                                               cAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTACAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTg                                                                                                                 <  2:352523/288‑1 (MQ=255)
                                                                                                                                                   taaggacgagcAGAACACGTACATGGGATTGGCTTGTGCTATGCGTACAGTCACTGTCAGATATCAGACACGTTCTGCGCACTCAGACCCACACGTTTTGCCGCTTCATTCGGCAACGCTAAAAGCGAAAAAGGCAGCTGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCGCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGa                                                                                                            <  2:2941217/279‑1 (MQ=255)
                                                                                                                                                   tAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGa                                                                                                            <  2:2287808/289‑1 (MQ=255)
                                                                                                                                                                      gATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATc                                                                                         >  2:47855/1‑289 (MQ=255)
                                                                                                                                                                       aTAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCg                                                                                        >  1:291197/1‑289 (MQ=255)
                                                                                                                                                                         aaGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGc                                                                                      <  1:2332103/289‑1 (MQ=255)
                                                                                                                                                                         aaGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGc                                                                                      <  2:2173608/289‑1 (MQ=255)
                                                                                                                                                                         aaGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGc                                                                                      <  2:897394/289‑1 (MQ=255)
                                                                                                                                                                              aTTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGttt                                                                                                                                                                                                                                            <  2:926193/134‑1 (MQ=255)
                                                                                                                                                                               ttAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGgtg                                                                                 >  1:1713396/1‑288 (MQ=255)
                                                                                                                                                                                   cTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACg                                                                            >  1:1895818/1‑289 (MQ=255)
                                                                                                                                                                                     tgtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGat                                                                          >  2:1925510/1‑289 (MQ=255)
                                                                                                                                                                                      gtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTctgatt                                                                                                                                                                                                                                                   <  2:1666781/119‑6 (MQ=255)
                                                                                                                                                                                      gtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATCGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCAACCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCCGGCGTCACGatt                                                                         >  2:190212/1‑288 (MQ=255)
                                                                                                                                                                                      gtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTcac                                                                                                                                 >  1:1850402/1‑233 (MQ=255)
                                                                                                                                                                                      gtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTcac                                                                                                                                 <  2:1850402/233‑1 (MQ=255)
                                                                                                                                                                                      gtgCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGa                                                                                                            >  1:3133613/1‑254 (MQ=255)
                                                                                                                                                                                        gCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTc                                                                                                                                                                                   <  1:632588/181‑1 (MQ=255)
                                                                                                                                                                                             tCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCg                                                                                                                                                                                                  <  1:2752303/161‑1 (MQ=255)
                                                                                                                                                                                             tCGTAAAGTGTTTGGGAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCtt                                                                  <  2:1791177/289‑1 (MQ=255)
                                                                                                                                                                                                    gTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGCTAGCGGTAAACCGCTACTCGGCAAGTGTCACGATATGTGCTTTGCCtta                                                           >  2:856971/1‑288 (MQ=255)
                                                                                                                                                                                                     tttCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTgg                                                                                                                                                                          <  2:423655/177‑1 (MQ=255)
                                                                                                                                                                                                        cTGGCAGATATCAAGCACGTTCTGCGCACTCCGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAACGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGCCCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAaag                                                       <  1:1533309/289‑1 (MQ=255)
                                                                                                                                                                                                          ggCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAaagaa                                                     >  1:1068820/1‑289 (MQ=255)
                                                                                                                                                                                                               atatCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTtata                                                                                                                                                                                                                                   <  2:2419302/110‑1 (MQ=255)
                                                                                                                                                                                                               atatCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGt                                                                                                                                                                            >  1:3021512/1‑165 (MQ=255)
                                                                                                                                                                                                               atatCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCtt                                                >  1:1237917/1‑289 (MQ=255)
                                                                                                                                                                                                                 atCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTctgat                                                                                                                                                                                                                                                    >  2:2635099/1‑87 (MQ=255)
                                                                                                                                                                                                                 atCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGAc                                                                                                                                                                        <  2:624853/167‑1 (MQ=255)
                                                                                                                                                                                                                         cGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGa                                                                                                                                                                         >  2:2995959/1‑158 (MQ=255)
                                                                                                                                                                                                                           ttCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGAc                                                                                                                                                                                                            >  2:1621831/1‑121 (MQ=255)
                                                                                                                                                                                                                           ttCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGa                                                                                                            >  2:2552149/1‑217 (MQ=255)
                                                                                                                                                                                                                                  cACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAg                                     >  1:2989725/1‑281 (MQ=255)
                                                                                                                                                                                                                                    cTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAAtc                            >  1:1162840/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   tttGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAg                                     <  1:2223293/264‑1 (MQ=255)
                                                                                                                                                                                                                                                   tttGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAg                                     >  2:2223293/1‑264 (MQ=255)
                                                                                                                                                                                                                                                   tttGCCGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGgcgc             >  1:1305769/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       ccGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCGGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGGCGcaccac        <  2:2973595/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGCTTCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGGCGcaccac        <  1:1008937/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGCTTCAATCTGCAACGCCGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGGCGcaccac        <  2:1070305/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            tCAATCTGCAACGCTGAAAGCGAAAAAGGCAGCGGCGCGGATTCTGATTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAAt                             >  1:217271/1‑263 (MQ=255)
                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                 
ATGGCGTGGTGCGCATCGACCTTTTTGTCATCCCAACAGCGGTTGCGTATATCTGGATCTACCACTGGCTGCGGCAACAGATCCGGTGCATGAACACTGATGGCATTCATCACCGCGTGGCGTCCGGCAAAATGTTCTTCTGGCAAATAGCGACAATCAGAACGCGGATAAGTGATTAGCTTGTGCGTTTCGTACAGTTTCTGGCAGATATCAAGCACGTTCTGCGCACTCAGACCAAAACGTTTTGCCGCTTCAATCTGCAACGCACTAAGGCTAAAAGGCAGCGGCGCGGATTCACTTTCCCGTTTATCGTTATAGCTGGTGACAATAGCCGGTTGACCACTAATGCGGTTAACCACATGCTCCGCCAGTGGACGATGTAACAAGCGCCCTTCTTCATCCTGGTACGGTTCACACGCTTCGCTCGGTTGCCAGATAGCGGTAAACCGCTCATCGGCAGGTGTCACGATATGTGCTTTGACTTCAAAGAAGTCTTTCGCCACGAAGTTTTCAATCTCTTCATCGCGGCGCACCACCAGCCC  >  CP042583/1527866‑1528407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A