Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,580,362 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,580,3620AT99.4% 801.2 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base T (165/173);  total (168/173)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,580,3630GC99.7% 799.1 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (167/172);  total (168/173)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01
*CP0425831,580,3640CG99.4% 805.5 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (165/173);  total (168/173)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

TGACCCGCTATGTGATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑AGC‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGAGTTTTACCGCAGCTATAGGTTCTGACGCGGTTAACAGCACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACCGCCGC  >  CP042583/1580084‑1580641
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
     cGCTATGTGATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACTCAGCCATTTTCGCCGTGGTGTGCTGATAAACGATCTAAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAATTGCGTATTTATAACTCCGGCACCGGCAACA‑C‑ACCGTGTTCCTGGCTTg                                                                                                                                                                                                                                                                          >  2:2347257/1‑289 (MQ=255)
            tgATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACAtt                                                                                                                                                                                                                                                                   <  2:782371/289‑1 (MQ=255)
              aTGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTAc                                                                                                                                                                                                                                                                 >  1:297513/1‑289 (MQ=255)
                 gCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACACC‑TCG‑TTTTCCGGGCTTGAAACATTACGt                                                                                                                                                                                                                                                               >  2:1154040/1‑288 (MQ=255)
                  cAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGt                                                                                                                                                                                                                                                               >  1:1880317/1‑287 (MQ=255)
                                       aTGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATaa                                                                                                                                                                                                                                        <  2:1273880/289‑1 (MQ=255)
                                        tGTTTTCCCGATGTGTAGTCAGTTTCATGTTGGCAATAACGTCGCACCCAGCGATTTTCGCCGTGGTGTGCTGATAAAAGATCTCCATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATAGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAag                                                                                                                                                                                                                                       <  2:2064746/289‑1 (MQ=255)
                                                cGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAagtcatttac                                                                                                                                                                                                                               <  2:137143/289‑9 (MQ=255)
                                                  aTGAGTAGTCAGTTTCATGTTGGCATTAACCTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTAcc                                                                                                                                                                                                                              >  2:339779/1‑288 (MQ=255)
                                                   tGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCg                                                                                                                                                                                                                             <  2:1090721/288‑1 (MQ=255)
                                                           cAGTTCCATGTTGGCATTAACGTCGCATCCAGCCATTTTTGCCGTGGTGTGCTGATAAAAGATCTCAATCAGGACTGGTTTAGCGCGCACCCGATTCAGCAACTGATCCTCGAAGTCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGAGTGCCCGCGAGCGGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCtat                                                                                                                                                                                                                      <  2:2261461/287‑1 (MQ=255)
                                                                 cATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGCAAATTTATAAGTCATTTACCGCAGCTATAGTTTCTg                                                                                                                                                                                                              >  2:2816002/1‑289 (MQ=255)
                                                                   tGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTAcc                                                                                                                                                                                                                              >  1:2936797/1‑271 (MQ=255)
                                                                         cATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGACATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGt                                                                                                                                                                                                       <  2:2220347/288‑1 (MQ=255)
                                                                                  cGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAActcgacg                                                                                                                                                                                             >  2:1427809/1‑283 (MQ=255)
                                                                                     aCCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAActcgacggt                                                                                                                                                                                           <  1:2390243/288‑9 (MQ=255)
                                                                                     aCCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAActcgacggt                                                                                                                                                                                           <  1:2438931/288‑9 (MQ=255)
                                                                                        cAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGAcc                                                                                                                                                                                       <  1:2874981/289‑1 (MQ=255)
                                                                                         aGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTcc                                                                                                                                                                                                                                                                                 <  1:312333/198‑1 (MQ=255)
                                                                                          gCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTCGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCtat                                                                                                                                                                                                                      <  2:262/256‑1 (MQ=255)
                                                                                                   gCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATatcatca                                                                                                                                                                             >  1:127874/1‑288 (MQ=255)
                                                                                                          tgtgCTGATAAAAGCTCTCAACCAGTCCTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCt                                                                                                                                                                      <  2:22042/288‑1 (MQ=255)
                                                                                                            tgCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAagtcatt                                                                                                                                                                                                                                  >  2:178571/1‑221 (MQ=255)
                                                                                                                   aaaaGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGGGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGCCGGTGACCGATATCACCATTCCGCTGGGGCAAAgc                                                                                                                                                            >  2:1672793/1‑288 (MQ=255)
                                                                                                                      aGATCTCAATCAGTACTGGTTTAGCTCTCACACGATTCAGCAACTGATCCTCGAACTCACCGAACGCGATGCCTTACTGGATGATGAGTATCGGATTGCCCGCGAGCGCCATCGTAGAAACGTCCAACTGGCGATTGATGACTTCGGCACCGGCAACAGCTAGC‑‑CTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGAAGACATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATAACATCATCGCCCTGGAGCGAAGAGTg                                                                                                                                                         >  2:1527303/1‑289 (MQ=255)
                                                                                                                      aGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGAc                                                                                                                                                                                                                                                         <  2:2540328/193‑1 (MQ=255)
                                                                                                                      aGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTg                                                                                                                                                         >  1:3187830/1‑289 (MQ=255)
                                                                                                                        aTCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTTCTGAAAATTGATAAGTCATTTACCGCCGCTATAGGTTCTGATGCGGTTAACACGACGGTGACTGATATCATCAGCCCGCTGGGGAACAGACTGaa                                                                                                                                                       >  2:3096581/1‑289 (MQ=255)
                                                                                                                           tcAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCCCGCTGGGGCCAAGACTGAattt                                                                                                                                                    >  2:2966675/1‑287 (MQ=255)
                                                                                                                                   tACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCGTCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGGGACCGATATCCTCATCGCGCTGGGGCAAAGACTGAACATTGAACtgg                                                                                                                                            >  2:88724/1‑289 (MQ=255)
                                                                                                                                   tACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCg                                                                                                                                                                                                                             <  1:2143350/208‑1 (MQ=255)
                                                                                                                                        gTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCg                                                                                                                                                                                                                             <  2:718057/203‑1 (MQ=255)
                                                                                                                                        gTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGt                                                                                                                                                                                                       >  2:3051603/1‑225 (MQ=255)
                                                                                                                                        gTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGa                                                                                                                                                                                         <  1:2201827/239‑1 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACAtt                                                                                                                                                                                                                                                                   <  1:553021/160‑1 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCg                                                                                                                                                                                                                             <  1:1171333/198‑1 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCg                                                                                                                                                                                                                             >  2:2044935/1‑198 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGa                                                                                                                                                 <  1:3048320/274‑1 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAAc                                                                                                                                               <  1:2995597/276‑1 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAggg                                                                                                                                  >  1:1629264/1‑289 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAggg                                                                                                                                  >  1:149803/1‑289 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAggg                                                                                                                                  >  1:1369450/1‑289 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCCCGCTGGGGCAAAGCCTGAATATTGAACGGGTGGCgggggg                                                                                                                                  >  2:1594752/1‑289 (MQ=255)
                                                                                                                                             gcgcTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCCACGGTGACCGATATCATCATCGCGCTGGGGCAAAGAATGAATTTTGAACTGGGGGCGGAggg                                                                                                                                  >  2:2749533/1‑289 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCT‑TCTTCATGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGAAGCTATAGGTTCTGCCGCGTTAAACTCGACTGTGACCGATATCATCATCGCGCTGCGCCAACGACCAAAAATGGAAGTGGTGGCggcgtgattgg                                                                                                                             >  2:2842812/1‑280 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGt                                                                                                                                                                                                       >  1:1260702/1‑215 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGa                                                                                                                                                                                         <  1:437003/229‑1 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGa                                                                                                                                                                                         >  2:437003/1‑229 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATcgcg                                                                                                                                                                        <  1:793763/246‑1 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGc                                                                                                                                                                 >  1:2547092/1‑253 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGa                                                                                                                                                 >  1:2666503/1‑269 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTCAAAATTGATAAGTCATTTACCGCAGCCATAGGTTCTGACCCGGTTAACTCCAAGGTGTCCGACATCAACATCGCTCTCGGGCCACGACAGCATATTGACCCAGTCGCGGAGGACCTgg                                                                                                                             >  2:1985440/1‑289 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGCGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCTGCGACTGAATATTTAACTGGTGGCGGCGGGCGTgg                                                                                                                             >  1:105444/1‑289 (MQ=255)
                                                                                                                                                  cACCCGATTCAGCAACTCATCCTCGAAATCACCGCACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCAACGTAAAAACGACACTCTGGCGCTTGATGACTTCGGAACCTGCAACAGC‑CCG‑TCTTCCTGGCTTGAAACATTACGTCCTGCCGTGCTGAAAATTTATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGTGGACCGATATCATCATCGCGCACGCGCCAATACTGAAAATAGCACTGGTGTCGGAGTGCGTgg                                                                                                                             >  2:30149/1‑289 (MQ=255)
                                                                                                                                                   aCCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGa                                                                                                                            >  1:1217235/1‑289 (MQ=255)
                                                                                                                                                   aCCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGAGTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCtat                                                                                                                                                                                                                      <  2:2106048/199‑1 (MQ=255)
                                                                                                                                                          tCAGCAACTGATCCTCGAACTCACCGAACGCGATGCCTTACTGGATGTTGATGATCGGTTTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGGCGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGt                                                                                                                                                                                                                  <  2:795004/196‑1 (MQ=255)
                                                                                                                                                             gCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGAcc                                                                                                                                                                                       <  1:2230431/220‑1 (MQ=255)
                                                                                                                                                                   gATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAActcgacggt                                                                                                                                                                                           <  1:765952/210‑9 (MQ=255)
                                                                                                                                                                     tCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGaa                                                                                                          <  1:2749533/289‑1 (MQ=255)
                                                                                                                                                                            aaTCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTg                                                                                                   <  1:2057991/289‑1 (MQ=255)
                                                                                                                                                                              tCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTgcg                                                                                                 <  1:1769776/289‑1 (MQ=255)
                                                                                                                                                                              tCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTgcg                                                                                                 <  1:1427809/289‑1 (MQ=255)
                                                                                                                                                                                      cgcgATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACt                                                                                                                                                          >  1:717622/1‑224 (MQ=255)
                                                                                                                                                                                          aTGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGt                                                                                     >  1:402370/1‑289 (MQ=255)
                                                                                                                                                                                           tGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCAt                                                                                          <  1:2324620/283‑1 (MQ=255)
                                                                                                                                                                                           tGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTg                                                                                    >  2:2463993/1‑289 (MQ=255)
                                                                                                                                                                                            gCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGc                                                                                   <  2:947392/289‑1 (MQ=255)
                                                                                                                                                                                                     gATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAGAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCGACAGC‑TCG‑TTTACCGGGCTTAAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATCTACCGCAGCTATAGGTTCTGACGCGGTTAGCTCGACGGGGACCGATATCATCCTCGCGCTGGGGGAAAGAGTGAATATTGAACTGGTGGCGGAGGGCGCGGACACGCGAGAACAGGCGATGTATTTGCGCCGACATGGCGTGCATACTATGc                                                                          >  2:1303866/1‑289 (MQ=255)
                                                                                                                                                                                                     gATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCt                                                                                                                                                                                                                                                                                <  2:1842736/91‑1 (MQ=255)
                                                                                                                                                                                                     gATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCt                                                                                                                                                                                                                                                                                >  1:1842736/1‑91 (MQ=255)
                                                                                                                                                                                                     gATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGCAAATTGATAAGTCATTTACCGCAGCTATACGTTCTGACGCGGTTCACTCGACGGTGACCGATAGCATCATCGCGCTTGGGCAAAGACTGAATATTTAACTGGTGGCGGCGGGCGTGGAAACGCCAGAACAGGAGGCGGATTTGCGCCGGAATgggggtgagtttttgc                                                                          >  2:1875238/1‑275 (MQ=255)
                                                                                                                                                                                                     gATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGc                                                                                                                                                                 >  2:50876/1‑202 (MQ=255)
                                                                                                                                                                                                       tGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTAcc                                                                                                                                                                                                                              >  1:2840322/1‑139 (MQ=255)
                                                                                                                                                                                                       tGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTg                                                                                                   <  2:2677500/262‑1 (MQ=255)
                                                                                                                                                                                                       tGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCaa                                                                        >  1:1983559/1‑289 (MQ=255)
                                                                                                                                                                                                       tGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCaa                                                                        >  1:3032274/1‑289 (MQ=255)
                                                                                                                                                                                                          tGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAggg                                                                     >  2:2078707/1‑289 (MQ=255)
                                                                                                                                                                                                          tGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAggg                                                                     <  1:3071675/289‑1 (MQ=255)
                                                                                                                                                                                                           gATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAAc                                                                                                                                               <  2:808414/214‑1 (MQ=255)
                                                                                                                                                                                                           gATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAAc                                                                                                                                               >  1:808414/1‑214 (MQ=255)
                                                                                                                                                                                                            aTTATCTGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGGGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGGGCATATTTGGAAAGGGTa                                                                   >  2:173475/1‑289 (MQ=255)
                                                                                                                                                                                                            aTTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTa                                                                   <  2:3032274/289‑1 (MQ=255)
                                                                                                                                                                                                            aTTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGAGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAAc                                                                                                                                               <  1:2789351/213‑1 (MQ=255)
                                                                                                                                                                                                             ttATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTa                                                                   <  2:744212/288‑1 (MQ=255)
                                                                                                                                                                                                               aTCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTAttt                                                                <  1:1643002/289‑1 (MQ=255)
                                                                                                                                                                                                                     ttGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGc                                                          <  2:2401648/289‑1 (MQ=255)
                                                                                                                                                                                                                     ttGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGc                                                          <  2:402370/289‑1 (MQ=255)
                                                                                                                                                                                                                      tGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGt                                                              <  1:2088716/284‑1 (MQ=255)
                                                                                                                                                                                                                        cccGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCCCGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGcaca                                                       >  1:1105343/1‑289 (MQ=255)
                                                                                                                                                                                                                             gAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCg                                                   <  1:8899/288‑1 (MQ=255)
                                                                                                                                                                                                                                  gCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCg                                             <  1:249746/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCgg                                                                                                                                      >  2:1463315/1‑194 (MQ=255)
                                                                                                                                                                                                                                                  aaaCTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACt                                                                                                                                                          <  2:566370/164‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaaCTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTgcg                                                                                                 <  1:2042649/221‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaaCTGGCGATTGATGACTTCGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGcac                                                        <  1:1532195/262‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgtCGGCACCGGCAACAGC‑TCG‑TTGTCCTGGCTTGAAACATTTCGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGCGGCGGTTCACTCGGCGGTGACCGATATCAGCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGc            <  2:105444/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                      cGGCACCGGCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGCTATCATCATCGCGCCGGGGCAAAGACTGAATATTGAACTGGTGGGTGAGAGCTTGGCAACGCAAAAACAGGCAAAGTAGTTGCGCCGTCATGGCGTGCATATTTTGGAAGGGTACTTGTACGCACAGCATATGCGCCAAGGTGGTTTTCCCCAAGGGCTGGCGGGCCGGCaa         >  2:1208081/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             ggCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAAAATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACcgccgc  <  1:961704/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              gCAACAGC‑TCG‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGTCATTTACCGCAGCTATAGGTTCTGACGCGGTTAACTCGACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAggg                                                                     <  2:1240160/221‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
TGACCCGCTATGTGATGGCAGAAACCATTCGTCAGCGCCATGTTTTCCCGATGAGTAGTCAGTTTCATGTTGGCATTAACGTCGCACCCAGCCATTTTCGCCGTGGTGTGCTGATAAAAGATCTCAATCAGTACTGGTTTAGCGCTCACCCGATTCAGCAACTGATCCTCGAAATCACCGAACGCGATGCCTTACTGGATGTTGATTATCGGATTGCCCGCGAGCTGCATCGTAAAAACGTCAAACTGGCGATTGATGACTTCGGCACCGGCAACAGC‑AGC‑TTTTCCTGGCTTGAAACATTACGTCCTGACGTGCTGAAAATTGATAAGAGTTTTACCGCAGCTATAGGTTCTGACGCGGTTAACAGCACGGTGACCGATATCATCATCGCGCTGGGGCAAAGACTGAATATTGAACTGGTGGCGGAGGGCGTGGAAACGCAAGAACAGGCGAAGTATTTGCGCCGTCATGGCGTGCATATTTTGCAAGGGTATTTGTACGCACAGCCGATGCCGCTACGTGATTTTCCCAAATGGCTGGCGGGCAGCCAACCGCCGC  >  CP042583/1580084‑1580641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A