Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,581,529 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,581,5290GC99.4% 833.3 / NA 356intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (182/170);  total (185/171)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,581,5300CG99.4% 830.0 / NA 356intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (181/171);  total (185/171)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,581,5310TA99.4% 836.9 / NA 356intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (2/0);  new base A (181/170);  total (185/171)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 356 total aligned reads displayed.

ACAGACTGTGCGGACTAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGGC‑TCGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑GCTCTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATGCTGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTG  >  CP042583/1581249‑1581809
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                      
aCAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACtggtg                                                                                                                                                                                                                                                                                  >  1:1005855/1‑289 (MQ=255)
aCAGACTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACtggtg                                                                                                                                                                                                                                                                                  >  1:3137435/1‑289 (MQ=255)
    aCTGTGCGGTGAAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGG‑CGACTGGTGGCGa                                                                                                                                                                                                                                                                              >  1:1385074/1‑289 (MQ=255)
        tgcggtgaagagagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATaa                                                                                                                                                                                                                                                                          >  1:2921358/9‑289 (MQ=255)
        tgcggtgaagagagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATaa                                                                                                                                                                                                                                                                          >  1:1632344/9‑289 (MQ=255)
        tgcggtgaagagagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCACCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATaa                                                                                                                                                                                                                                                                          >  1:673403/9‑289 (MQ=255)
                  agagCCGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGAGGCGTCATGATCCCGCGCAGAG‑ACGGCGCCGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGCACCGGCATCGGCATCGGGTTATCGGCATCGCGCTGAACATTGGCCTGACGTTACCCGCCCATCCAACGCAGTATGGCATCGGCAGTACGCGCTCGCCGCGGCAAAGC‑CGACTGCGTGCCAATAAAGTTCCGAc                                                                                                                                                                                                                                                                 >  2:719041/1‑288 (MQ=255)
                  agagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGAc                                                                                                                                                                                                                                                                 >  2:787418/1‑288 (MQ=255)
                  agagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGAc                                                                                                                                                                                                                                                                 >  1:465950/1‑288 (MQ=255)
                  agagCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGG‑CGACCGGTGGCGAAGAAAGTTGCGAc                                                                                                                                                                                                                                                                 >  2:2984863/1‑288 (MQ=255)
                          tGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCaa                                                                                                                                                                                                                                                           <  1:858030/286‑1 (MQ=255)
                                             ccccGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCga                                                                                                                                                                                                                                         <  2:877763/285‑1 (MQ=255)
                                             ccccGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGCTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCgatgat                                                                                                                                                                                                                                     >  1:390953/1‑289 (MQ=255)
                                                       aGCGTCAACCCAGCTTATTTCACCGCTCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCgatgatgatcgagaa                                                                                                                                                                                                                            >  1:2264496/1‑282 (MQ=255)
                                                       aGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCgatgatgatcgagaag                                                                                                                                                                                                                           >  2:1531742/1‑282 (MQ=255)
                                                            cAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCaa                                                                                                                                                                                                                       <  1:2984863/288‑1 (MQ=255)
                                                              aCCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGGCGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATc                                                                                                                                                                                                                     >  1:27448/1‑288 (MQ=255)
                                                                     ttcgctCACCGAGCGGCGTCATGATCCCGCGCAGAGCACGCG‑ACGCCTGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCGTCGGC‑AAATGCACCGTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGc                                                                                                                                                                                                                <  2:555209/281‑1 (MQ=255)
                                                                         ttCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACt                                                                                                                                                                                                                                             <  1:828439/253‑1 (MQ=255)
                                                                              cgcgcgGCGTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATcgcg                                                                                                                                                                                                                  >  1:751183/1‑275 (MQ=255)
                                                                                     cgTCATGATCCCGCGCAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATc                                                                                                                                                                                                                                                         <  2:1336687/229‑1 (MQ=255)
                                                                                                  cgcAGAGAACGCG‑ACGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATc                                                                                                                                                                                                                                                         <  2:1481369/216‑1 (MQ=255)
                                                                                                        agaacgcgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAAt                                                                                                                                                                                                                                                          <  2:760083/201‑1 (MQ=255)
                                                                                                        agaacgcgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCt                                                                                                                                                                           >  2:1553450/10‑289 (MQ=255)
                                                                                                        agaacgcgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCt                                                                                                                                                                           >  2:2543524/10‑289 (MQ=255)
                                                                                                        agaacgcgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCACGCCACTCAAACGCAGGATGGCATAGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTGAAACACTTCGATGCTGATCGAGAAGCCAATCACGGCATAAAGGTAACCTTTCTGAAGGTGgaaaacgaaacat                                                                                                                                                                           >  2:2282431/10‑287 (MQ=255)
                                                                                                             gcgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGCAAAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATAAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTg                                                                                                                                                                       <  1:907072/285‑1 (MQ=255)
                                                                                                              cgacGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGc                                                                                                                                                                      >  1:2359701/4‑288 (MQ=255)
                                                                                                                 ggCCAGCGTCAGTACGGCGTTAATCGTGTAACGTTCTTCTTCGGC‑AAAGGCACCTTCCGGGAGCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGccac                                                                                                                                                                   <  2:2246345/287‑1 (MQ=255)
                                                                                                                 cGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGccac                                                                                                                                                                   <  1:1334719/288‑1 (MQ=255)
                                                                                                                  gCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGccacca                                                                                                                                                                 >  1:1154870/1‑289 (MQ=255)
                                                                                                                              ccGCCGTTAATCATGTAGCGTTCTTCTTAGGC‑AAATGCACCTTCCGGGAGCGGCATCGGCATCGGGTTATCGGCATAGTGCTGAACATTGGCCTGGCGTTTCCCGGCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCAACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGAc                                                                                                                                                        <  2:1617774/285‑1 (MQ=255)
                                                                                                                                    ttAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCga                                                                                                                                                                                                                                         >  1:979486/1‑199 (MQ=255)
                                                                                                                                    ttAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTa                                                                                                                                               >  2:3078285/1‑289 (MQ=255)
                                                                                                                                     tAATCATGTAACGTTCTTCTTCGGC‑AAATGCCCCTTCCGGGATCGGCATCGGCATCGGGTTAACGGCATCGTGCTGAACATTGGCCTGACGTCTCATGCCCATCAAACGCCGGATGGCATCGGCAGTACGCGCTCGCATCGGCAAAGTCGATCT‑GTGGCGCATACAGTTGTGCCGCGCGACTTGGTTAAACACCTCGAGGATGATCGCGACGACAGTCGTGGCATACAGGTAACGTTCTGTGATGCGGAAAACGAAACTCCCTGCACCCCGAGTCAGAcaattcctga                                                                                                                                               >  2:2072121/1‑279 (MQ=255)
                                                                                                                                        tcctGTAACGTTCTTTTTGGGC‑AAAGGCCCCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           <  2:2921358/286‑1 (MQ=255)
                                                                                                                                        tCATGTACCGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           <  2:3178815/289‑1 (MQ=255)
                                                                                                                                        tCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           <  1:2811465/289‑1 (MQ=255)
                                                                                                                                        tCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           <  1:2137727/289‑1 (MQ=255)
                                                                                                                                          aTGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGa                                                                                                                                         <  1:1820965/289‑1 (MQ=255)
                                                                                                                                            gTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCACTCTGGGTAAACACTTCGATGATGAACGAGAAGCCAATCCCCTCATACATGTAACCCTTCGGAATATGGAAACCGAAACCTTCTGCCACCAGACTCAGCACAATCACTACAAGGac                                                                                                                                        >  2:2832213/1‑287 (MQ=255)
                                                                                                                                            gTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATAATTAACAGGaa                                                                                                                                        >  1:1877876/1‑288 (MQ=255)
                                                                                                                                              aaCGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCACACTCAGACAAACCACTACCAGGAAGc                                                                                                                                      >  2:497649/1‑288 (MQ=255)
                                                                                                                                                cGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCa                                                                                                                                                                                                               >  2:2809652/1‑213 (MQ=255)
                                                                                                                                                  ttcttcgtaGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTAGCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTcaga                                                                                                                                 <  2:192416/289‑1 (MQ=255)
                                                                                                                                                   tcttcttcGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTcagac                                                                                                                                <  1:782028/289‑1 (MQ=255)
                                                                                                                                                    cttcttcGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATcg                                                                                                                                                                                                                    >  2:1148138/1‑204 (MQ=255)
                                                                                                                                                     ttcttcGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  2:731403/1‑276 (MQ=255)
                                                                                                                                                     ttagtcGGC‑AAATGCACCTACCGGGTTCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGGCGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTcagacag                                                                                                                              <  2:27448/285‑1 (MQ=255)
                                                                                                                                                         tcGGC‑AAATCGACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACCTTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGGATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGca                                                                                                                          <  1:1922630/289‑1 (MQ=255)
                                                                                                                                                          cGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcac                                                                                                                         <  1:239158/289‑1 (MQ=255)
                                                                                                                                                          cGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcac                                                                                                                         <  1:1531742/289‑1 (MQ=255)
                                                                                                                                                             c‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGcacca                                                                                                                       <  2:1005855/288‑1 (MQ=255)
                                                                                                                                                                     aCCTGCCGGGACCGGCATCGGCAACGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTg                                                                                                               <  2:210722/289‑1 (MQ=255)
                                                                                                                                                                      ccTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGAc                                                                                                                                                        >  1:1448706/1‑247 (MQ=255)
                                                                                                                                                                         tCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAACGTTGCGACGCGCAATCTGGTTAAACACTTAGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATAGGGAAATCGAAACCTTCCGCCACCAGACCCAGACCCATCCTTAAAAGGAAGCAACGACACACCACCACCCCCgctgtat                                                                                                           >  2:1893156/1‑283 (MQ=255)
                                                                                                                                                                          ccGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTg                                                                                                          <  2:1078820/289‑1 (MQ=255)
                                                                                                                                                                          ccGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTg                                                                                                          <  1:2002341/289‑1 (MQ=255)
                                                                                                                                                                            gggATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCt                                                                                                        <  1:1085643/289‑1 (MQ=255)
                                                                                                                                                                                 cggcatcggcatCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCaa                                                                                                                                                                                                                       <  1:2434983/173‑1 (MQ=255)
                                                                                                                                                                                 cggcatcggcatCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCaa                                                                                                                                                                                                                       >  2:2434983/1‑173 (MQ=255)
                                                                                                                                                                                 cggcatcggcatCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  1:2517798/1‑249 (MQ=255)
                                                                                                                                                                                   gcatcggcatcgGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCGGGTTAAc                                                                                                 >  2:605726/1‑289 (MQ=255)
                                                                                                                                                                                       cggcagaggtgtATGGGCATCGTGCTGCACATTTGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGAGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTCTCGGAATGTGGAAAACGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAAt                                                                                             <  1:2072121/278‑1 (MQ=255)
                                                                                                                                                                                                          tCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGAt                                                                           >  2:1301102/1‑288 (MQ=255)
                                                                                                                                                                                                             tGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATc                                                                                                                                                                                                                                                         >  2:849279/1‑111 (MQ=255)
                                                                                                                                                                                                                tGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCa                                                                    <  1:2863870/289‑1 (MQ=255)
                                                                                                                                                                                                                  aaCATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGAGCGAGAAGCCAATCGCGGAATACAGGTAACCTTTCGGACTGTGGAAACCGAAACCTTCTGCCACCAGACCCCGACCCATCATTAACAGGAAGCACAGACAGAGCACCACTCCCTCGGGGTGCTGGGTAACGGACCTCGTCACAGGGTTGGAACCCAGCaa                                                                   >  2:3093281/1‑288 (MQ=255)
                                                                                                                                                                                                                      ttGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  1:1551148/1‑212 (MQ=255)
                                                                                                                                                                                                                       tGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  1:160057/1‑211 (MQ=255)
                                                                                                                                                                                                                       tGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  1:2554833/1‑211 (MQ=255)
                                                                                                                                                                                                                       tGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGc                                                                                                                                      >  1:574081/1‑216 (MQ=255)
                                                                                                                                                                                                                       tGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACCTaa                                                              >  1:2709077/1‑288 (MQ=255)
                                                                                                                                                                                                                            tGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAg                                                                                                                                           >  2:2686360/1‑206 (MQ=255)
                                                                                                                                                                                                                                  ttCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCa                                                   <  1:723405/288‑1 (MQ=255)
                                                                                                                                                                                                                                        cccATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACt                                             >  2:97700/1‑288 (MQ=255)
                                                                                                                                                                                                                                        cccATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACt                                             >  2:335175/1‑288 (MQ=255)
                                                                                                                                                                                                                                        cccATCAAACGCAGGATGGCATCGGAAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAAACTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGt                                                                                                     >  1:2614857/1‑232 (MQ=255)
                                                                                                                                                                                                                                           aTCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccg                                         <  1:175144/289‑1 (MQ=255)
                                                                                                                                                                                                                                            tCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTc                                                                                                                                                                         >  1:122458/1‑160 (MQ=255)
                                                                                                                                                                                                                                             cAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccgc                                        >  1:2668703/1‑288 (MQ=255)
                                                                                                                                                                                                                                              aaaCGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTAccgccg                                      <  1:3078285/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ggATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATc                                                                                                                                                                                                                                                         >  2:1814347/1‑71 (MQ=255)
                                                                                                                                                                                                                                                     ggATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCcatca                                >  1:1764215/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      gATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGa                                                                                                                                         >  2:1934620/1‑182 (MQ=255)
                                                                                                                                                                                                                                                      gATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGa                                                                                                                                         <  1:1934620/182‑1 (MQ=255)
                                                                                                                                                                                                                                                      gATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTg                                                                                                               <  2:1199525/208‑1 (MQ=255)
                                                                                                                                                                                                                                                           cATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCg                          >  1:3191731/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           cATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCACCGCCATCACCACCGCCGCCATCATCCCCg                          >  2:1782039/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           cATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTGCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACATAGCACCACCACCGTGGGTTGCTGGGTAAAGAAGCGAGTCAGCGGTTTGGGTGCCAGCAAAATAACCGCCCTCGACAACACCACCGGCGCCATCATCACCg                          >  2:2359792/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  aGTACGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGa                                                                                                                                         <  2:1729836/170‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aCGCGCTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATgg                  <  1:168672/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGccac                                                                                                                                                                   <  2:2592179/137‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCa           >  2:2487716/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cTCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAAcaa           >  1:1798870/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                           tCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCca                                   <  2:166720/263‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tCGCAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCAt          <  1:1064505/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                              cAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCt      >  2:1089326/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              cAGCGGCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCt      >  2:2875569/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  ggCAAAGT‑CGACTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATCGAGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACt   <  2:1390704/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                      
ACAGACTGTGCGGACTAGAGAGCAGTTGCTCGCGGATTTCATCGACCCCGAGATTAGCGTCAACCCAGCTTATTTCACCGCGCGGCGTCATGATCCCGCGCAGAGAACGGC‑TCGCCAGCGTCAGTACGCCGTTAATCATGTAACGTTCTTCTTCGGC‑AAATGCACCTTCCGGGATCGGCATCGGCATCGGGTTATCGGCATCGTGCTGAACATTGGCCTGACGTTTCCCGCCCATCAAACGCAGGATGGCATCGGCAGTACGCGCTCGCAGCGGCAAAGT‑GCTCTGGTGGCGAATAAAGTTGCGACGCGCAATCTGGTTAAACACTTCGATGATGATGCTGAAGCCAATCGCGGCATACAGGTAACCTTTCGGAATGTGGAAACCGAAACCTTCTGCCACCAGACTCAGACCAATCATTAACAGGAAGCTCAGACAGAGCACCACCACCGTGGGGTGCTGGTTAACGAATCGCGTCAGCGGTTTGGATGCCAGCAACATAACCGCCATCGCAATCACTACCGCCGCCATCATCACCGGCAGATGGTTAACCATCCCTACTG  >  CP042583/1581249‑1581809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A