Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,625,748 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,625,7480GC100.0% 742.8 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (164/147);  total (164/147)
*CP0425831,625,7490CG99.7% 736.2 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (163/146);  total (164/147)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,7500TA100.0% 743.4 / NA 311intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (164/147);  total (164/147)

Only 100 of 311 total aligned reads displayed.

AGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGACTACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTT  >  CP042583/1625476‑1626029
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                       
cgcgcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                                                                                                                                                                           <  2:565924/288‑1 (MQ=255)
   gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                                                                                                                                                                           <  1:1504900/286‑1 (MQ=255)
   gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACAGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcat                                                                                                                                                                                                                                                                        <  2:389921/289‑1 (MQ=255)
              aCTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGc                                                                                                                                                                                                                                                             <  1:966645/289‑1 (MQ=255)
                       aaGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                                                                                                                                                                             >  2:1952476/1‑264 (MQ=255)
                           cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                                                                                                                                                                                <  2:1618751/289‑1 (MQ=255)
                           cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                                                                                                                                                                                <  1:1521961/289‑1 (MQ=255)
                           cccAGAAAGCTGGCGCTGCGAAGGAAGTTATATTGCGGATCCGGCACCTGATAAAACTCCAGCCGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                                                                                                                                                                                <  2:1697971/289‑1 (MQ=255)
                                    cGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                                                                                                                                                                           <  1:1959034/253‑1 (MQ=255)
                                       gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                                                                                                                                                                             >  1:2971472/1‑248 (MQ=255)
                                       gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                                                                                                                                                                             <  2:2971472/248‑1 (MQ=255)
                                        cgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                                                                                                                                                                           >  2:1511774/1‑249 (MQ=255)
                                             cGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATc                                                                                                                                                                                                                               >  2:646589/1‑288 (MQ=255)
                                              gACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCCCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGGGAGCATccc                                                                                                                                                                                                                             >  2:18032/1‑287 (MQ=255)
                                                               aGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                                                                                                                                                                             <  1:646589/288‑1 (MQ=255)
                                                                 aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCttt                                                                                                                                                                                                          >  1:1655731/1‑289 (MQ=255)
                                                                   ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                                                                                                                                                                           <  1:2260770/222‑1 (MQ=255)
                                                                    cGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTcc                                                                                                                                                                                                       >  1:932878/1‑289 (MQ=255)
                                                                      gCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCa                                                                                                                                                                                                      >  2:2167458/1‑288 (MQ=255)
                                                                      gCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCATTTTCCa                                                                                                                                                                                                      >  1:762535/1‑288 (MQ=255)
                                                                                           gatGCACAATACCCAAACGGTCGCGCAACGGTGATGTCAGCGAACCTACGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCg                                                                                                                                                                                <  2:904013/287‑1 (MQ=255)
                                                                                             tGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTa                                                                                                                                                                              >  1:2006627/1‑289 (MQ=255)
                                                                                                  aaTACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACCGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTa                                                                                                                                                                         <  1:353610/289‑1 (MQ=255)
                                                                                                  aaTACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTa                                                                                                                                                                         <  1:1061663/289‑1 (MQ=255)
                                                                                                   aTACCAACACGGTCGCGAAACGGTGATGTCAGCGAACCTGCGCGGGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTaa                                                                                                                                                                        <  2:932878/289‑1 (MQ=255)
                                                                                                    tACCAAAACGGTCGCGCAACTGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                                                                                                                                                                                     >  1:1912321/1‑211 (MQ=255)
                                                                                                              gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCa                                                                                                                                                             >  2:2739261/1‑289 (MQ=255)
                                                                                                                cgcgCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                                                                                                                                                                                     >  2:3081935/1‑199 (MQ=255)
                                                                                                                cgcgCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCAtt                                                                                                                                                           <  1:18032/289‑1 (MQ=255)
                                                                                                                         gtgatgtcagcgaaCCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTAGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAAt                                                                                                                                                  >  1:1179680/14‑289 (MQ=255)
                                                                                                                            atgtcagcgaaCCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGAACGTCATGCGGTTCAAGGTTAGTTAGCATCGCAGCCAAGTCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCCTAAATTAACGACCCTTTCCTTCGCACAAATGtt                                                                                                                                               >  2:2775452/11‑289 (MQ=255)
                                                                                                                             tgtcagcgaaCCTGCGCGCGTGGTTGCACCACTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACACATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCCTCAATAAACAGCACGTCATGCGGTTCAAGGTTCGTGAGCATCGCAGCCCAATCGCCCGCCTTTTCCAGCCCAGGACCAGAAGTCGTTCGTAACTAAACTCCAATTTCATTGACGAACATGtcg                                                                                                                                              >  2:2425986/10‑287 (MQ=255)
                                                                                                                             tgtcagcgaaCCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTg                                                                                                                                              >  1:628780/10‑289 (MQ=255)
                                                                                                                                cagcgaaCCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGc                                                                                                                                            <  2:314272/282‑1 (MQ=255)
                                                                                                                                   cgaaCCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCG‑‑CGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGt                                                                                                                                      >  1:7359/4‑289 (MQ=255)
                                                                                                                                        cTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAACGTTGGCAAGCg                                                                                                                                       >  1:245906/1‑285 (MQ=255)
                                                                                                                                        cTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAACGTTGGCAAGCg                                                                                                                                       <  2:245906/285‑1 (MQ=255)
                                                                                                                                         tGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGtt                                                                                                                                  <  2:2576066/289‑1 (MQ=255)
                                                                                                                                           cgcgcgTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtca                                                                                                                                                                                                                                                                         <  2:1205118/152‑1 (MQ=255)
                                                                                                                                           cgcgcgTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtca                                                                                                                                                                                                                                                                         >  1:1205118/1‑152 (MQ=255)
                                                                                                                                           cgcgcgTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTc                                                                                                                                                                                                        <  1:295920/217‑1 (MQ=255)
                                                                                                                                           cgcgcgTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTc                                                                                                                                                                                                        >  2:295920/1‑217 (MQ=255)
                                                                                                                                               ggTGGTTGCAACAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCCGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTAcc                                                                                                                             <  2:1248690/287‑1 (MQ=255)
                                                                                                                                                  ggTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCAt                                                                                                                                                                                                                                                      <  2:1987623/164‑1 (MQ=255)
                                                                                                                                                    ttGCACCAACTAGGGGAAACCGGTGCAAATAAATTTTAATGCAGCGTGCCGCCGCACCTTCACCAAGCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACCACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAAccc                                                                                                                       <  2:850724/289‑1 (MQ=255)
                                                                                                                                                          cAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACg                                                                                                                                                                      >  2:140871/1‑236 (MQ=255)
                                                                                                                                                            aTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAAtt                                                                                                                                                                          >  1:1226865/1‑230 (MQ=255)
                                                                                                                                                            aTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAAtt                                                                                                                                                                          <  2:1226865/230‑1 (MQ=255)
                                                                                                                                                            aTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCggaggc                                                                                                                >  2:513512/1‑287 (MQ=255)
                                                                                                                                                            aTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCggagga                                                                                                                >  1:2570820/1‑288 (MQ=255)
                                                                                                                                                            aTCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCggagga                                                                                                                >  1:102097/1‑288 (MQ=255)
                                                                                                                                                            aTCAGGGCAAACGGAGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAg                                                                                                                                    >  1:211352/1‑268 (MQ=255)
                                                                                                                                                             tCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTcc                                                                                                                                                                                                       <  1:843875/200‑1 (MQ=255)
                                                                                                                                                                  gTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCaaaa                                                                                                          <  1:2739261/288‑1 (MQ=255)
                                                                                                                                                                      aCGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGTACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTgg                                                                                                                                             <  2:681364/249‑1 (MQ=255)
                                                                                                                                                                      aCGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGTCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTg                                                                                                                                                                                  >  2:362092/1‑212 (MQ=255)
                                                                                                                                                                      aCGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTc                                                                                                                                                                                                        <  1:875630/190‑1 (MQ=255)
                                                                                                                                                                      aCGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGc                                                                                                                                        <  1:1089362/254‑1 (MQ=255)
                                                                                                                                                                      aCGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCg                                                                                                                                       >  1:1388952/1‑255 (MQ=255)
                                                                                                                                                                        ggcggcAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATcaaca                                                                                                   >  1:2418865/1‑289 (MQ=255)
                                                                                                                                                                           ggcAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAAt                                                                                                >  1:567749/1‑289 (MQ=255)
                                                                                                                                                                            gcAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                                                                                                                                                                                     <  1:1004560/139‑1 (MQ=255)
                                                                                                                                                                            gcAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                                                                                                                                                                                     >  2:1004560/1‑139 (MQ=255)
                                                                                                                                                                                               gCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                                                                                                                                                                                >  2:749341/1‑125 (MQ=255)
                                                                                                                                                                                               gCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTAccc                                                                                                                            <  1:2414559/241‑1 (MQ=255)
                                                                                                                                                                                               gCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTAccc                                                                                                                            >  2:2414559/1‑241 (MQ=255)
                                                                                                                                                                                               gCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCggag                                                                                                                  >  1:494435/1‑251 (MQ=255)
                                                                                                                                                                                                cGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCa                                                                           >  1:2834295/1‑289 (MQ=255)
                                                                                                                                                                                                               tCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTtga                                                            >  2:204557/1‑289 (MQ=255)
                                                                                                                                                                                                                cACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATTTTGGCAAGCGGAGTTTTACCCAACCCCGGAGCACCAAAAATCAACAAACGATCGAGGGGATCGCCGCCCCGTTTCGCCGCttgcat                                                           >  2:2117085/1‑285 (MQ=255)
                                                                                                                                                                                                                 aCCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTtgatg                                                          >  2:2656028/1‑289 (MQ=255)
                                                                                                                                                                                                                    aaTCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGaaa                                                       <  2:1464482/289‑1 (MQ=255)
                                                                                                                                                                                                                          gATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGa                                                                                                                                                      <  1:2172337/188‑1 (MQ=255)
                                                                                                                                                                                                                          gATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTcc                                                 <  1:2127552/289‑1 (MQ=255)
                                                                                                                                                                                                                          gATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTcc                                                 >  1:2759593/1‑289 (MQ=255)
                                                                                                                                                                                                                              tCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCa                                                >  1:1460480/1‑286 (MQ=255)
                                                                                                                                                                                                                                cAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCgg                                                                                                                    <  2:2869713/216‑1 (MQ=255)
                                                                                                                                                                                                                                  gTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGAAGTTTCGCTGCCTTGATGAAAAtcacacttcgtga                                         >  2:1179664/1‑278 (MQ=255)
                                                                                                                                                                                                                                   ttGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCcgcg                                                                             >  1:375221/1‑252 (MQ=255)
                                                                                                                                                                                                                                   ttGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTgtgaa                                        >  2:1761435/1‑285 (MQ=255)
                                                                                                                                                                                                                                    tGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTgtgaac                                       >  1:261519/1‑284 (MQ=255)
                                                                                                                                                                                                                                     ggTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGc                                                                                                                                            >  2:2255958/1‑187 (MQ=255)
                                                                                                                                                                                                                                            ttCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGc                               >  1:2871995/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tCCATTGCCGGGTACAGCACTTCTTCAACACCTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTGAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCAATGGCGACAATGTTGACAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCACCGCCGCGCAGTTTGCCTGATTGGCTGAAAATCGCCACCTGTGAACGAACCTGCg                              >  2:492867/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aTTGCCGGGTACAGCACTTCTTCAACTACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCt                           <  1:554312/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aTTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCt                           <  1:3140255/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  tGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGa                         <  2:1318943/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    ccGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTa                                                                                                                                                                                                                                        >  2:1061756/1‑80 (MQ=255)
                                                                                                                                                                                                                                                      gggTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACa                                                                                                                                                    <  2:2501732/162‑1 (MQ=255)
                                                                                                                                                                                                                                                      gggTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCt                                             >  1:2238058/1‑265 (MQ=255)
                                                                                                                                                                                                                                                         tACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACa                   <  1:1739748/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            aGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATAc                >  2:620636/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              cACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTTAACCAACCCGCGGTCGACCAACATAatct             >  2:1115889/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATActct             >  1:1602687/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   cttcAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCAt                                                                                                                                                                                                                                                      >  1:2581245/1‑51 (MQ=255)
                                                                                                                                                                                                                                                                   cttcAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCgctgct                                                                >  1:2330759/1‑233 (MQ=255)
                                                                                                                                                                                                                                                                   cttcAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCgctgct                                                                <  2:2330759/233‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cttcAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAg        >  2:795297/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      caacaaCTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACa                   >  1:666452/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                        acaacTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGAc                        >  1:1300389/1‑268 (MQ=255)
                                                                                                                                                                                                                                                                                |||                                                                                                                                                                                                                                                                                       
AGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATTGGCGACAATGTTGGCAAGCGTAGTTTTACCCAACCCCGGAGGACCAAAAATCAACAAATGATCGAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGACTACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTT  >  CP042583/1625476‑1626029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A