Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,640,034 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,640,0340GC99.4% 766.0 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (160/161);  minor base A (2/0);  total (162/162)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,640,0350CG99.4% 755.9 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (160/161);  minor base T (1/1);  total (162/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,640,0360TA99.4% 767.5 / NA 324intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (162/159);  minor base G (0/2);  total (162/162)
Fisher's exact test for biased strand distribution p-value = 2.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 324 total aligned reads displayed.

AACCTAATTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAAGCTCGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCGCTCTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGGCTACTGGTTTTCACACTGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTCCACAATA  >  CP042583/1639756‑1640313
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
aacccactgcgcgGACCGTGCCAAAACCCTAAAGAAGGGCGGAAAACTCCCCGTCGCTGTAGCAAAAATCCCCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGc                                                                                                                                                                                                                                                                               <  2:585814/280‑1 (MQ=255)
  ccTAATTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGc                                                                                                                                                                                                                                                                               <  1:2992925/287‑1 (MQ=255)
  ccTAATTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTg                                                                                                                                                                                                                                                                             >  1:2200210/1‑289 (MQ=255)
  ccTAATTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCAGACTGCTCGCTg                                                                                                                                                                                                                                                                             >  2:1474132/1‑289 (MQ=255)
     aaTTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCa                                                                                                                                                                                                                                                                          <  1:2369721/289‑1 (MQ=255)
     aaTTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCa                                                                                                                                                                                                                                                                          <  1:1816753/289‑1 (MQ=255)
       ttCGCGGCCCGTGCGCCAATCCTCAAGAATGGCGGCAAGCTCACCGTGGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAAc                                                                                                                                                                                                                                                                        <  2:2257284/289‑1 (MQ=255)
          gcgGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAt                                                                                                                                                                                                                                                                     <  2:1012139/289‑1 (MQ=255)
          gcgGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAt                                                                                                                                                                                                                                                                     <  1:1380447/289‑1 (MQ=255)
                  tGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACCCCTTAATTACGCCGACTGCCCGCTGGCAACGATCTCTTCaa                                                                                                                                                                                                                                                             >  1:2884219/1‑289 (MQ=255)
                               aaGAATGGCGGCAACATCCCCGTCGACGTAGCAAAAATCCCCACCGCGTGCGCGAATTATCCGTTACACAGGGATCGTCACCCGCTGGCGCACGGAGTTCAGTACACCCAACGCCGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATg                                                                                                                                                                                                                                                <  2:3060311/289‑1 (MQ=255)
                               aaGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATg                                                                                                                                                                                                                                                <  1:571113/289‑1 (MQ=255)
                               aaGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGAGCGTCCCCCGCTCGCCCACGGATCTCAGTACACCCCACGACGGCGTTAAGCCCCCCCCTTTCGGGCCTGCGCATAATTCAACTCGGTCTGCGCCGTTCTGCTCCGCCGTTAGTGCCCATTCCGTCCTGCAACAGCCATTTCCCAGTAATGCCATTTTTAGTCCTTAATTACGCACACTGCTCTCTCGCAAGGATCCCTTCACTTGACCACGGATg                                                                                                                                                                                                                                                >  2:406629/1‑289 (MQ=255)
                                     ggcggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAtct                                                                                                                                                                                                                                                                   <  1:812227/264‑1 (MQ=255)
                                       cggcAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCa                                                                                                                                                                                                                                                                          <  2:898986/255‑1 (MQ=255)
                                                      cGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCa                                                                                                                                                                                                                          >  1:733317/1‑288 (MQ=255)
                                                      cGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCa                                                                                                                                                                                                                          >  1:1273969/1‑288 (MQ=255)
                                                                aaaaTCCCCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCAt                                                                                                                                                                                                                         <  2:1522935/279‑1 (MQ=255)
                                                                   aTCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAg                                                                                                                                                                                                                                     <  1:3186136/264‑1 (MQ=255)
                                                                    cccccaccGCGTGGGCGAATATGCGAATGCACAGTGATCGTCACCCGCTGGCGCACTGATTTCAGTCCCCCCAACGACGGCGTTCAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGc                                                                                                                                                                                                           <  2:2200210/286‑1 (MQ=255)
                                                                     caccacCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGc                                                                                                                                                                                                                                                                               <  2:1919479/220‑1 (MQ=255)
                                                                     caccacCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCa                                                                                                                                                                                                                                                      >  1:915419/1‑245 (MQ=255)
                                                                       ccaccGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTc                                                                                                                                                                                                        >  2:1649387/1‑289 (MQ=255)
                                                                                 ggCGATTTATCGAATGCACAGGGTTCGTCACCCGCTGGCGCACGGATTTCATTACACCCACCGCCGGCGTTAGGCCCCCCTCTTTGGGGGCGGCGCATAATTCAACTCTTTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAG‑AATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTa                                                                                                                                                                                              <  1:2442302/288‑1 (MQ=255)
                                                                                  gCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTaa                                                                                                                                                                                             >  1:776235/1‑289 (MQ=255)
                                                                                      aTTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGc                                                                                                                                                                                         <  2:2062205/289‑1 (MQ=255)
                                                                                               tGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTc                                                                                                                                                                                 >  1:1521180/1‑288 (MQ=255)
                                                                                                 cacaGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGa                                                                                                                                                                                                                                                  <  1:1993858/221‑1 (MQ=255)
                                                                                                           gTCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGAtt                                                                                                                                                                                                   >  1:174740/1‑258 (MQ=255)
                                                                                                            tCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTa                                                                                                                                                                                              <  2:2540634/262‑1 (MQ=255)
                                                                                                            tCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTggcga                                                                                                                                                                     >  1:1667422/1‑284 (MQ=255)
                                                                                                            tCACCCGCTGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTggcga                                                                                                                                                                     >  1:1858552/1‑284 (MQ=255)
                                                                                                                ccGCTGTCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGt                                                                                                                                                               <  2:2521313/289‑1 (MQ=255)
                                                                                                                    tGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAt                                                                                                                                                                                                                                                                     >  2:3115364/1‑183 (MQ=255)
                                                                                                                    tGGCGCACGGATTTCAGTACACCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTGTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCGTTAATTACGCCGACTGCTCGCTGGCTACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCCCACCTTTTGGCGAACTGGTTTTc                                                                                                                                                           >  2:1352875/1‑289 (MQ=255)
                                                                                                                         tccgtgtttCAGTACACCCAACGACTGGGTTAAGCCCCCCTCTTTTGGGGCTGCGAATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTGAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTcactg                                                                                                                                                       <  2:3029124/282‑3 (MQ=255)
                                                                                                                                      acacCCAACGACGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGt                                                                                                                                            <  1:1340665/286‑1 (MQ=255)
                                                                                                                                        acccaacgacGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGc                                                                                                                                                                                                               <  1:11209/208‑1 (MQ=255)
                                                                                                                                           caacgacGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAg                                                                                                                                    <  2:232500/283‑1 (MQ=255)
                                                                                                                                            aacgacGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGt                                                                                                                                   <  2:3132811/284‑1 (MQ=255)
                                                                                                                                                    cGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAt                                                                                                                                                                                                                                                                     <  1:2844723/151‑1 (MQ=255)
                                                                                                                                                    cGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGAcc                                                                                                                                                                                                                                                       <  2:454159/165‑1 (MQ=255)
                                                                                                                                                    cGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTcactgagat                                                                                                                                                   <  2:1330427/265‑7 (MQ=255)
                                                                                                                                                      ttAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGaaa                                                                                                                                                                                                                                             >  2:1386291/1‑173 (MQ=255)
                                                                                                                                                      ttAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTcc                                                                                                                                 <  2:2875459/281‑1 (MQ=255)
                                                                                                                                                              cccTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTGGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCACTGGACCAAGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGCTTCGGTAATCGTTCATGCTCACCTTTTGGCGAACTTGTTTTCTCTTAGATCCCCGGTAGGCTGATTCCTTCTTCGAAAAGCAAt                                                                                                                 >  2:806181/1‑289 (MQ=255)
                                                                                                                                                              cccTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGt                                                                                                                                                               <  2:1239523/243‑1 (MQ=255)
                                                                                                                                                              cccTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAAt                                                                                                                 >  1:265872/1‑289 (MQ=255)
                                                                                                                                                              cccTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAAt                                                                                                                 >  2:1753544/1‑289 (MQ=255)
                                                                                                                                                                           cTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGt                                                                                                                                            >  1:1086412/1‑249 (MQ=255)
                                                                                                                                                                           cTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGt                                                                                                                                            <  2:1086412/249‑1 (MQ=255)
                                                                                                                                                                            tGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGc                                                                                                   >  1:22414/1‑289 (MQ=255)
                                                                                                                                                                             gcgcATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAtct                                                                                                                                                                                                                                                                   <  1:2646336/128‑1 (MQ=255)
                                                                                                                                                                             gcgcATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGAtct                                                                                                                                                                                                                                                                   >  2:2646336/1‑128 (MQ=255)
                                                                                                                                                                             gcgcATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTggcgaa                                                                                                                                                                    <  1:191109/223‑5 (MQ=255)
                                                                                                                                                                             gcgcATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCa                                                                                                  >  1:393207/1‑289 (MQ=255)
                                                                                                                                                                             gcgcATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCa                                                                                                  >  1:943800/1‑289 (MQ=255)
                                                                                                                                                                                          ctctGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGc                                                                                                                                                                                                               <  1:2799164/167‑1 (MQ=255)
                                                                                                                                                                                          ctctGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTg                                                                                     >  2:928446/1‑289 (MQ=255)
                                                                                                                                                                                             tgtctgCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGTCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCGCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGa                                                                                   >  1:1424675/1‑288 (MQ=255)
                                                                                                                                                                                               tctgCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAg                                                                                             <  2:2381498/276‑1 (MQ=255)
                                                                                                                                                                                                    gcCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAg                                                                                             >  1:488321/1‑271 (MQ=255)
                                                                                                                                                                                                       gTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGGCTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAg                                                                        <  2:1870969/289‑1 (MQ=255)
                                                                                                                                                                                                        ttttGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCtt                                                                                                                               >  2:660951/1‑233 (MQ=255)
                                                                                                                                                                                                                  ccGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCCTCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCaa                                                             >  1:2122087/1‑289 (MQ=255)
                                                                                                                                                                                                                   acgtAGTGAACATTCACTGCTGTCACAGCAAATTTCCAGTAATACCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATCGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAat                                                            <  2:1808992/286‑1 (MQ=255)
                                                                                                                                                                                                                    gTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAata                                                           <  2:559888/289‑1 (MQ=255)
                                                                                                                                                                                                                     ttAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCCCCCGGCAGAACGATTTCAatat                                                          >  2:1981598/1‑289 (MQ=255)
                                                                                                                                                                                                                     ttAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAatat                                                          >  2:2488092/1‑289 (MQ=255)
                                                                                                                                                                                                                          gCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc                                                     <  1:1949505/289‑1 (MQ=255)
                                                                                                                                                                                                                             caTTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGa                                                                                                                                                                                                     <  1:420161/142‑1 (MQ=255)
                                                                                                                                                                                                                             caTTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTccc                                                    <  2:1169517/287‑1 (MQ=255)
                                                                                                                                                                                                                             caTTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc                                                     >  2:1281219/1‑286 (MQ=255)
                                                                                                                                                                                                                              aTTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAAc                                                 <  2:2660965/289‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTtcatca                                                                                                                          <  2:1198201/215‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAata                                                           <  2:172859/278‑1 (MQ=255)
                                                                                                                                                                                                                               ttCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCaa                                                  >  2:2855654/1‑287 (MQ=255)
                                                                                                                                                                                                                               ttCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAAcc                                                <  2:2441953/289‑1 (MQ=255)
                                                                                                                                                                                                                                   aTGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTcactg                                                                                                                                                       >  2:2809388/1‑180 (MQ=255)
                                                                                                                                                                                                                                         tAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGt                                                                                                                                            <  1:2912672/187‑1 (MQ=255)
                                                                                                                                                                                                                                         tAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGt                                                                                                                                            >  2:2912672/1‑187 (MQ=255)
                                                                                                                                                                                                                                         tAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAAc                                                                     <  1:1191474/258‑1 (MQ=255)
                                                                                                                                                                                                                                         tAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTggg                                      >  1:2527010/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aaCAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCAcc                                                                              <  1:2421732/248‑1 (MQ=255)
                                                                                                                                                                                                                                          aaCAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGt                                     >  1:3127391/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      ccACTAGTGCCATATATACCCGTTCATTACACCGTCTGCTCGCTAGCAACGACCTCTTCAATGGACCACGTATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCTGATTCGGTCATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTTAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTccc                         <  2:2122087/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaTGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCg                       <  1:3106241/286‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaTGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGc                    <  2:733317/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             tGCCATTTTTACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTca                                                                                                                                                          <  1:2498484/153‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tttttACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAg                                                                                                                                    >  1:2575917/1‑170 (MQ=255)
                                                                                                                                                                                                                                                                  tttttACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAg                                                                                                                                    <  2:2575917/170‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttttACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAg            <  2:365788/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttttACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTATCGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTcc                                                     <  1:2712308/248‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tACTCCTTAATTATGCGGACTGGTCGCTGGCAACGATCTCTTCAATGGACCACGGAGTAAACTTATTAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTc         <  2:715661/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tACTCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTc         <  1:2542694/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATg                                                                                                                                                                                                                                                <  1:1216092/55‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tCCTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTCcac      >  1:1691466/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           cTTAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTCCACaa    >  1:715661/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             tAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGGATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAAGATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCAGGGGAGCTCTACAATa  >  2:79677/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             tAATTACGCCGACTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTATTGGCGAACTGGTTTTCACTGAGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTCCTGGATCACCCGGCAGAACGATTCCAATATGCTCCCAACCTTCgt                                           >  2:2712308/1‑248 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                     
AACCTAATTCGCGGACCGTGCGCACATCCTCAAGAATGGCGGCAAACTCACCGTCGCTGTAGCAAAAATCACCACCGCGTGGGCGAATTATCGGATGCACAGGGATCGTCACCCGCTGGCGCACGGATTTCAGTACACCCAAGCTCGGCGTTAAGCCCCCCTCTTTTGGGGCTGCGCATAATTCAACTCTGTCTGCGCCGTTTTGCTGCGCCGTTAGTGCACATTCCATGCTGTAACAGCAAATTTCCAGTAATGCCATTTTTACTCCTTAATTACGCGCTCTGCTCGCTGGCAACGATCTCTTCAATGGACCACGGATGAAACTTAATAGTTGTTTTGCCATCGGTGACCGCCAGCGTCGGATTCGGTAATCGCTCATGCTCACCTTTTGGGCTACTGGTTTTCACACTGATCCCCGGTAGGCTGAGTCCTTCATCAGAAAGCAATGCCAGCGCACGGGCATTCAGCGTTTCTGGATCACCCGGCAGAACGATTTCAATATGTTCCCAACCTTCGTGTGGGTAACGTTTTTCCCCGGGCCACGGTAGCTCCACAATA  >  CP042583/1639756‑1640313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A