Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F210 I1 R1
|
4928 |
368.7 |
6392010 |
97.5% |
6232209 |
231.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,971,833 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,971,833 | 0 | G | C | 98.0%
| 696.2
/ NA
| 304 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/4); new base C (164/134); total (166/138) |
| Fisher's exact test for biased strand distribution p-value = 4.16e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
| * | CP042583 | 1,971,834 | 0 | C | G | 98.0%
| 682.5
/ NA
| 304 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (5/1); new base G (159/136); total (166/138) |
| Fisher's exact test for biased strand distribution p-value = 2.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,971,835 | 0 | T | A | 99.3%
| 716.5
/ NA
| 304 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (166/136); minor base C (0/2); total (166/138) |
| Fisher's exact test for biased strand distribution p-value = 2.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 304 total aligned reads displayed.
GGTATTGCTGAACGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGGCTCACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCA > CP042583/1971554‑1972112
|||
gCTGAACGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCCCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGa > 2:1273883/1‑287 (MQ=255)
cTGAACGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGAtc > 1:1316758/1‑288 (MQ=255)
aaCGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCAt > 1:168081/1‑289 (MQ=255)
aaCGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCAt > 2:1763742/1‑289 (MQ=255)
cTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCCCGGCACGGCGTACACCAGCCGCAGGCCTCACGGGCGAAAAACCCCTCCCGGTTACG‑CCCCAGCCACACCATGTTGAACCCATGGTCa > 2:44247/1‑289 (MQ=255)
gTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCaa > 1:1862384/1‑288 (MQ=255)
ttCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGtt < 1:1148882/268‑1 (MQ=255)
gCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCa > 1:2105850/1‑289 (MQ=255)
gCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCa < 2:310495/289‑1 (MQ=255)
tCAACTGCTTCGCGTAAACATTTGTTGCCGCGCCGTAGCGGGTCCCCTGCACCAGGTGCGTGGGCCCAGAAACTTTTCCCCGGGCCTGAGAATCAACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAgcg < 2:759868/289‑1 (MQ=255)
tCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAgcg < 1:44247/289‑1 (MQ=255)
gcTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCg > 1:1076290/1‑289 (MQ=255)
gCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCTGACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGaa > 1:873780/1‑289 (MQ=255)
gCTCAACTGCGCCAGGTGCGTGGGCACAGAAAGTGTTACCCGGGCCTAAGAATCGAAACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTAACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGa < 2:1350148/288‑1 (MQ=255)
cTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTAc > 1:2692065/1‑275 (MQ=255)
cTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAAt > 1:2482811/1‑289 (MQ=255)
cTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGAGACTTTCGAAt > 1:604617/1‑289 (MQ=255)
ccACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAgcg > 2:221940/1‑246 (MQ=255)
ccACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAAtt > 1:372654/1‑288 (MQ=255)
aCTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGcc > 1:1209628/1‑246 (MQ=255)
aCTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTcc > 2:304531/1‑288 (MQ=255)
cTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGcc > 1:2414788/1‑245 (MQ=255)
cACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGTGAAAAACTCTTCCAGGGTACG‑CACCAGCCACACCATGTTGATCTCATGGTCAACCGCCATCTCCAGCGCCGTACCCAGACCGCTGCCCG‑CTTTACCGATCCTTTCGAATTcccaca > 2:414925/1‑284 (MQ=255)
cACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCg > 2:1192454/1‑288 (MQ=255)
ccAGGTGCGTGGGCACAGACAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGCATTTTCACGCTCCCCGGCAGACCGTCGCGGCACGGCGTACCCCAGCCGCAGGACTCACGGGCGACAAACTCTTCCACGTTACGTCCCCACG‑ACACCATGTTGATCTCACTGTCAACCGGCATCACCCGCGCCGTCCCCACGCGGCAGGCCGTCTTAACCG‑TAATTTCGCATTCCAGTGGCa > 2:1731027/1‑289 (MQ=255)
ggTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGa > 1:3084502/1‑288 (MQ=255)
ggTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGa > 1:1116760/1‑288 (MQ=255)
gTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCg > 2:706026/1‑278 (MQ=255)
gTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAgg > 1:902423/1‑289 (MQ=255)
aaaGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATCCTTTCGAATTCCCTCGCCAGATCAAGGttcccctccg > 2:1862411/1‑280 (MQ=255)
tttACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCa < 2:1154274/287‑1 (MQ=255)
aCCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATg > 1:1882073/1‑181 (MQ=255)
gCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGAGCACGCAGAATTTTCGCGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAgcg > 2:898797/1‑206 (MQ=255)
cgAATGGACACAGTTCCGCGAGTGTTTCGATATCGCCCGACTGACCTTCCCCCCGCTCCAGCTCACGCAGAATGTTCACGCCCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCcg < 2:2105850/287‑1 (MQ=255)
aGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGcc > 1:134973/1‑203 (MQ=255)
cGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAAt < 2:2824973/237‑1 (MQ=255)
cGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAAt > 1:2824973/1‑237 (MQ=255)
cGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGcgccg > 1:2533548/1‑288 (MQ=255)
cGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGACCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGcgccg > 1:648262/1‑288 (MQ=255)
cGACACAGTTGCTCAAGTGTTTCGATATAGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGt > 2:2986360/1‑166 (MQ=255)
ttGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCTATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTg > 1:266111/1‑288 (MQ=255)
gCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGcc < 2:108170/176‑1 (MQ=255)
cAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCCCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTACCCGCGCCGCCTGGCTGccgg > 1:831086/1‑285 (MQ=255)
gtgtTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCg > 2:2431344/1‑248 (MQ=255)
gtgtTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCCGCCAGGCttt > 1:2851575/1‑289 (MQ=255)
gtTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTa < 1:1404458/288‑1 (MQ=255)
gtTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTa < 2:1316758/288‑1 (MQ=255)
tCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGc > 1:2802855/1‑193 (MQ=255)
tCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAAtt > 1:1583974/1‑289 (MQ=255)
cacGCCCGGCTAACCTCCCCCACGCCCCACCGCACGCGGAATTGTCACCCGCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGa < 2:1116760/287‑1 (MQ=255)
atCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGa < 1:705027/289‑1 (MQ=255)
atCCCCCGGCTGACCTCAACCACGCTCCAGCGCACGCAGAATTTGCACGCTCCACGGCAGACCGTCGCGGCACGGCGGACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGa < 1:1731027/289‑1 (MQ=255)
agcGCCCGGACGACCTTCACAACGCTCCACCGCACGCAGAATTTTCCCGCTCCCCGGCCGACCGCGGCGGACCGGCGCACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGa < 2:81264/287‑1 (MQ=255)
tCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGa > 1:2580847/1‑288 (MQ=255)
gCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGc < 2:1223824/185‑1 (MQ=255)
gCCCCGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTGCCCGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCa < 2:2851575/289‑1 (MQ=255)
cccGGCTGACCCTCCCCCCGCGCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACCCCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCTATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCAt < 2:266111/289‑1 (MQ=255)
cccGCCTGACCTTCACCACGGTCCCGCGCACGAGGAATTTTCAAGCTCCAAGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCAt < 2:1940550/289‑1 (MQ=255)
ccGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATc < 2:16595/289‑1 (MQ=255)
ccgCTGCCCTTCACCCCGCTCCAGCGCACGCAGAATTTTCCCGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCa < 1:414925/287‑1 (MQ=255)
cTGACCTTCACCACGCTCCAGCGCACGAAGAATTTTCCCACTCCACGGCCGACCTGCCCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGGTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACg < 1:2285405/288‑1 (MQ=255)
aCCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCAt > 1:235140/1‑288 (MQ=255)
ttCCCCCCGCCCCCGCGACCGCAGAATTTTCACCCCCCACGGCAGACCGTCGCGGCACGGCGTACACAAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATacca < 2:622804/289‑1 (MQ=255)
tCACCACACTCCAGCGCACGCAGAATGCTCACGCCCCACGGCAGACCGTCGCGGCACGGCGTACCCCAGCCGCAGGCCTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATaccac < 2:168081/289‑1 (MQ=255)
cGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATc < 2:2037910/203‑1 (MQ=255)
cGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGt > 1:1231669/1‑289 (MQ=255)
cTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAgcg < 1:1023622/146‑1 (MQ=255)
tCCAGCGCACGCAGAATTTTCACGCTCCACGGAGGACCATCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCttt < 2:2412282/254‑1 (MQ=255)
cAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGcc > 1:2908455/1‑145 (MQ=255)
cgcacgcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑c > 2:1885037/1‑162 (MQ=255)
cgcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAg > 1:1972169/1‑209 (MQ=255)
gcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCGGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGAt < 1:127025/289‑1 (MQ=255)
gcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAagtc > 1:3176706/1‑214 (MQ=255)
gcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGa > 2:2919216/1‑288 (MQ=255)
gcaGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGAGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGa > 1:2963947/1‑288 (MQ=255)
cGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCggt > 1:499670/1‑289 (MQ=255)
gtaCCCTCGCGGACCGGCGTACACCGGCCGCCGGACTGCAGGGCGAAACACTCTTCCAGCTTACG‑CACCCGCGAAACCATGTTGATCTCATGGTCAACCGCCACCGCCAGCGCCGTACACAGACGGATGCCCG‑CTTTACCGATACTTTCGACTTCCAGCGGCAGTTCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAAGTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACg < 2:1497958/287‑1 (MQ=255)
aCCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACgg > 1:1276140/1‑288 (MQ=255)
ccGGCGCCGCACGGCGTACCCCGGCCGCCGGCCTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACg < 2:372654/286‑1 (MQ=255)
ggCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTc < 1:1763742/289‑1 (MQ=255)
cGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTgcg < 1:1476358/158‑1 (MQ=255)
cGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTccc > 1:1092194/1‑289 (MQ=255)
cGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTccc > 1:1827175/1‑289 (MQ=255)
gTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCg < 2:511485/289‑1 (MQ=255)
ccGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCa > 2:1416208/1‑82 (MQ=255)
ccGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCAt > 1:2077676/1‑208 (MQ=255)
ccGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTcgcg < 1:2330234/245‑1 (MQ=255)
ccGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTcgcg > 2:2330234/1‑245 (MQ=255)
ccGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTc > 1:1662715/1‑288 (MQ=255)
gCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGa < 1:215880/122‑1 (MQ=255)
aGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGCTCCCGAACGGCAGTTCCCACCGTCCCGGATCTTTCAccc > 2:2345857/1‑288 (MQ=255)
aCGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATa > 2:2736709/1‑106 (MQ=255)
ggCGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGaa > 2:1046960/1‑288 (MQ=255)
cGAAAAACTCTTCCAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGc > 1:747910/1‑288 (MQ=255)
ctTCCAGGTTAGT‑AACAAGGACCACCAGGTTGAGCCGTTGGTCAACGGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCtt < 2:2580847/289‑1 (MQ=255)
ccAGGTTACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGt < 1:2460895/289‑1 (MQ=255)
ttACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGcc < 1:1919703/287‑1 (MQ=255)
tACG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCAACCGCCAACGCCGTACCCAGACGGCTGACCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAg < 2:655925/288‑1 (MQ=255)
cG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTTCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAg > 2:2480159/1‑267 (MQ=255)
cG‑CACCAGCGACACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCa > 2:182842/1‑288 (MQ=255)
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GGTATTGCTGAACGGCTGTTTGATTCCCGCCTCAAATTCTTCGCGGAAATATTTGATGGCGCTCTGTAACGGCTCCACTGCACCAGGTGCGTGGGCACAGAAAGTTTTACCCGGGCCTAAGAATCGACACAGTTGCTCAAGTGTTTCGATATCGCCCGGCTGACCTTCACCACGCTCCAGCGCACGCAGAATTTTCACGCTCCACGGCAGACCGTCGCGGCACGGCGTACACCAGCCGCAGGACTCACGGGCGAAAAACTCTTCCAGGTTACG‑CACCAGGCTCACCATGTTGATCTCATGGTCAACCGCCATCGCCAGCGCCGTACCCAGACGGCTGCCCG‑CTTTACCGATACTTTCGAATTCCATCGGCAGATCAAGGTGCGCTTCGGTCAGGAAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCA > CP042583/1971554‑1972112
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
