Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,503,508 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,503,508 | 0 | A | T | 100.0%
| 468.0
/ NA
| 198 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (92/106); total (92/106) |
| * | CP042583 | 1,503,509 | 0 | C | G | 100.0%
| 460.5
/ NA
| 198 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (92/106); total (92/106) |
| * | CP042583 | 1,503,510 | 0 | T | A | 99.5%
| 463.7
/ NA
| 198 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (92/105); minor base C (0/1); total (92/106) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 198 total aligned reads displayed.
TGACGGGAAAATTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGGCTGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTACTTACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGC > CP042583/1503228‑1503787
|||
tGACGGGAAAATTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATAGTTTTCTGCCTGTTCA‑CGCATTTTTGATACCAg > 2:835930/1‑289 (MQ=255)
aCGGGAAAATTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTTGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTa < 2:920927/289‑1 (MQ=255)
gAAAATTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAaga > 1:156498/1‑289 (MQ=255)
aaaTTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAagag < 1:1718964/288‑1 (MQ=255)
gctgcGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACaaa < 1:1866663/289‑1 (MQ=255)
cTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAAAAAAACAGAT‑AATTGTGTATCtt > 1:1744790/1‑289 (MQ=255)
tGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCttt > 1:1876313/1‑289 (MQ=255)
tGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAAAT‑AAATGTGTTTCttt > 1:1029464/1‑289 (MQ=255)
aCCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCa < 1:1249350/289‑1 (MQ=255)
aCCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCa < 2:1616398/289‑1 (MQ=255)
gCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACAAGCCAGTGTTTACGGAAATGCTTCAATAATGACCGGAACTTCATGTTTTTCTGCCTGTGCG‑CGCATTTTTGATACAAGTAAAGCGGTAGACATGCCCGCAGAACTAAACAGAT‑AACTGTGTTTACTTTCCATaaaa > 2:1889168/1‑288 (MQ=255)
tAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGcc < 2:812317/289‑1 (MQ=255)
tAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGcc < 1:1692446/289‑1 (MQ=255)
tAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGcc < 1:1275121/289‑1 (MQ=255)
aCGCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCAt < 2:1215083/289‑1 (MQ=255)
gCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATcg > 1:641107/1‑289 (MQ=255)
gCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATcg > 2:244881/1‑289 (MQ=255)
gCCTAAACCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATcg > 2:226899/1‑289 (MQ=255)
aCCATCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGAtt < 1:1483627/289‑1 (MQ=255)
tCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCt > 2:536154/1‑289 (MQ=255)
tCGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGGAAAGAGGTAGACATGCCCGCCGAACAAAACAGAT‑AAATGTGTTTTTTTTCCATAAAAATGCCCCTCTCGACGATTAttt > 2:153567/1‑287 (MQ=255)
cGACTTTGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTTCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACTGAT‑AATTGTGGTTATTTTCCATAAAACTGCCCTCCTCTACGATTAtt > 2:1054530/1‑286 (MQ=255)
tGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTg > 2:894303/1‑263 (MQ=255)
tGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTg < 1:894303/263‑1 (MQ=255)
tGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGcc > 2:1101138/1‑289 (MQ=255)
tGCCATAAAGCAGCGAGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGc > 2:118403/1‑288 (MQ=255)
aagcagcgagTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCCACGATTATCGGTCAGCCAGacac > 1:1387540/10‑288 (MQ=255)
cgagTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCaa > 1:37513/4‑289 (MQ=255)
gagTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGc < 1:1086677/284‑1 (MQ=255)
gagTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGc < 1:835930/284‑1 (MQ=255)
cAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCCGCCCTAATAACCCGACA‑TCTGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCt < 1:89647/288‑1 (MQ=255)
cTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTg < 1:1294165/289‑1 (MQ=255)
cTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTg < 1:1759174/289‑1 (MQ=255)
aaCCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTc < 1:1011584/289‑1 (MQ=255)
aCCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑ATATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTc > 2:570603/1‑288 (MQ=255)
aCCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTcc < 2:1341209/289‑1 (MQ=255)
gggTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑t > 2:1990184/1‑289 (MQ=255)
gCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGaa > 2:1359577/1‑288 (MQ=255)
cATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATACTGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGCCATGCCCGCCGCACAAAACAGAC‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGCCGATTATCTGTCAGCCGGACACTCCGCAAGCCTTCACCTTCTTCCATGCTCTGGG‑TAACTGTCTAAACCAACCTGACtgttct > 2:1744301/1‑287 (MQ=255)
aaTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGa < 1:818219/289‑1 (MQ=255)
aTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGt > 2:329334/1‑207 (MQ=255)
aTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTg < 1:1631875/236‑1 (MQ=255)
aTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTg > 2:1631875/1‑236 (MQ=255)
aTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaa > 2:484315/1‑289 (MQ=255)
aTCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGGATACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTACCTGTCAGCCAGACACTCCGCAAGCCTTACCCTGCTTCCATGCCCGTGG‑TAACTTCCGCAACCAACATGAATTTATTTTTGGTTgca > 2:1691620/1‑287 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCt > 1:1541901/1‑228 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa > 1:1666960/1‑289 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa < 2:1452799/289‑1 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa < 2:156498/289‑1 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa > 2:1701441/1‑289 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa > 1:587478/1‑289 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa > 1:1452799/1‑289 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaaa > 2:645595/1‑289 (MQ=255)
tCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGATGaaa > 1:428114/1‑289 (MQ=255)
cttcGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAg < 1:1410497/286‑1 (MQ=255)
gCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGa < 1:123093/289‑1 (MQ=255)
gCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGa < 1:1797158/289‑1 (MQ=255)
gCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGa < 1:242721/289‑1 (MQ=255)
cgtgCCCTAATAAACCGACA‑TTGAACTTCTGCCCTTTGTTCCCAGCCATTATTGCCGGAAATGCTTAAATACTGACCGGAACTTCATATTGTTCTGCCTGGGCG‑CGCATTTTTGAGACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGa < 2:1678636/286‑1 (MQ=255)
ccctataaCACCGCATTCGGCATTCGACCCTTTTTCCCCAGCCGTTGTTTCCGGAAATCCTTAATTAATGACCGAAATTTCTTTTTTTTC‑GCCTGTGCGCCGCTTTTTTGATACC‑GGAAAAAGGTAAACCATCCCGCAAGAAAAAACAAATAAAATTTGTTCCTTTCCCATAAACCTCCCCCCTCGGACGTTTTCCTTCCAGCCGAACCTCCCGAAGGCTTTACCCGGTTTCCAGGCT‑TGGG‑TAACTTTCCAAACCCACATGACTTTTTTTGTGGCTGAAAGGAGtata < 2:296591/285‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATCATGACCGGAAATTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:6939/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑ATATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtat < 1:570603/288‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 2:1745749/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 2:1666960/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:288325/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 2:1417242/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:1990184/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:1701441/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:536154/289‑1 (MQ=255)
ccTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:192448/289‑1 (MQ=255)
taaCACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGta < 1:298562/289‑1 (MQ=255)
taaCACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGta < 2:1718415/289‑1 (MQ=255)
taaCACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGta < 2:1812024/289‑1 (MQ=255)
taaCACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGta < 2:179379/289‑1 (MQ=255)
acGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATg < 2:148914/226‑1 (MQ=255)
acGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata > 1:767388/1‑280 (MQ=255)
acGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 2:767388/280‑1 (MQ=255)
gACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGa > 1:1431294/1‑287 (MQ=255)
a‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:358690/275‑1 (MQ=255)
a‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata > 2:358690/1‑275 (MQ=255)
tCGGCTTTCTGAACTTTTGTAGCAACTAGTGTTTCCGGAAATGCCTCAATAATGACCGGGCCTTCATATTTTTCTGCATGTGCG‑CGAATTTTTGATACCAGTTAAGAGGTAGACATTCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTCTCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAg < 2:1306830/289‑1 (MQ=255)
cATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGa < 1:1142864/260‑1 (MQ=255)
ttCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCCCAGAACAAACCAGAT‑AAATGGGTTTTTTTTCCATAAAACTGCCTTCACCGACAATTATCTGTCGGCCAGACCCTCCGCAAGCCTTAACCGCCTTCCTTTCCCTGGG‑TACCTTACGAAACCAACCTGCTTTTTTTTGTGCCTGAAGGGGTTATAGGTCATAAACCGGAGCacaag > 2:1361909/1‑285 (MQ=255)
cTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATA‑TTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:411531/265‑1 (MQ=255)
cTGACCTGTTTCACAAGCCCTTGTTCCCGTACATGCTTCAGTAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCAGTATTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTCTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGGTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGCGCAATAGTa < 2:586377/289‑1 (MQ=255)
tttttCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACTTGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCtt < 2:1873210/289‑1 (MQ=255)
agccagTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaa > 1:627955/1‑242 (MQ=255)
agccagTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGaa < 2:627955/242‑1 (MQ=255)
gccagTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTtata > 1:1823350/1‑289 (MQ=255)
tgtTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTg > 1:1351812/1‑289 (MQ=255)
ttCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGtt < 1:1359577/288‑1 (MQ=255)
ttCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTACCATGCTCTGGGTTAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGtt < 1:1672278/289‑1 (MQ=255)
gCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCGGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGAcc < 2:425884/289‑1 (MQ=255)
gAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGAccc > 1:972608/1‑287 (MQ=255)
cATATTTTTCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGtata < 1:1612856/210‑1 (MQ=255)
ttttCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCt > 1:1528818/1‑263 (MQ=255)
ttttCTGCCTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCg > 2:398362/1‑289 (MQ=255)
ccTGTGCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAaat > 2:214987/1‑289 (MQ=255)
gtgCG‑CGCATTTTTGATACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTTTTCACATTTCGGGCAaataat > 1:1709002/1‑289 (MQ=255)
ag‑cgcATTTTTGCTACCAGTAAAGAGGGAGACATGCCCGCAGAACAACACAGAT‑CAATGTGTTTCTTCTCCATAAACCTGCCATCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTCACTTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTATTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATCAACTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAACTc < 2:1151176/287‑1 (MQ=255)
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TGACGGGAAAATTTAAAATAAATTAATTTGCTGCGGCTTTTTTAATCGCTGCAACCGCAGCCTTAAGCACGCCTAAACCATCGACTTTGCCATAAAGCAGGCTGTCAATTACTTCAACCGGTTTGTTGGGTAACAAACGCTGGATTTCGGGCAACATATAAGCAATCTGCGGCCCTAATAACACGACA‑TCGGCATTCTGACCTTTTTCACCAGCCAGTGTTTCCGGAAATGCTTCAATAATGACCGGAACTTCATATTTTTCTGCCTGTGCG‑CGCATTTTACTTACCAGTAAAGAGGTAGACATGCCCGCAGAACAAAACAGAT‑AAATGTGTTTCTTTTCCATAAAACTGCCCTCATCGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGG‑TAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGC > CP042583/1503228‑1503787
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
