Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,508,133 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,508,1330GC98.9% 621.5 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (150/114);  total (151/117)
Fisher's exact test for biased strand distribution p-value = 8.29e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,508,1340CG99.2% 618.0 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (148/117);  total (151/117)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,508,1350TA98.5% 618.7 / NA 268intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (149/114);  minor base G (1/3);  total (151/117)
Fisher's exact test for biased strand distribution p-value = 3.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

CTGGTGATAAATAAAGCAAATAACCAGGATTAATCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGGCTGTGGCGAGTAATTTGGCTAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTC  >  CP042583/1507854‑1508408
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                 
                 aaaTAACCAGGATTAATCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTgcgaaacca                                                                                                                                                                                                                                                            <  1:981255/288‑9 (MQ=255)
                 aaaTAACCAGGATTAATCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTCTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTgcgaaacca                                                                                                                                                                                                                                                            <  1:814570/288‑9 (MQ=255)
                        cAGGATTAATCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATaa                                                                                                                                                                                                                                                    <  2:109267/289‑1 (MQ=255)
                               aaTCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAgcg                                                                                                                                                                                                                                             >  1:1787195/1‑289 (MQ=255)
                                     tATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAgcggc                                                                                                                                                                                                                                           <  2:55545/285‑1 (MQ=255)
                                     tATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGgtg                                                                                                                                                                                                                                       >  1:1257056/1‑289 (MQ=255)
                                            ttATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCAc                                                                                                                                                                                                                                <  2:792111/289‑1 (MQ=255)
                                               taAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGCAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGGGTTCTCTCgct                                                                                                                                                                                                                             >  2:502962/1‑287 (MQ=255)
                                               taAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAgcgg                                                                                                                                                                                                                                            <  1:591301/274‑1 (MQ=255)
                                               taAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGAt                                                                                                                                                                                                                             >  1:1504722/1‑289 (MQ=255)
                                                     atcAAATTAATACCCGCGGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGac                                                                                                                                                                                                                       <  2:1772712/287‑1 (MQ=255)
                                                        aaCTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGacac                                                                                                                                                                                                                     <  1:1010364/288‑1 (MQ=255)
                                                                    gCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATa                                                                                                                                                                                                         >  2:1530060/1‑288 (MQ=255)
                                                                    gCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATa                                                                                                                                                                                                         >  1:759654/1‑288 (MQ=255)
                                                                    gCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTAACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTCCTCACGATACCCACACTCccaccataac                                                                                                                                                                                                         >  2:1732423/1‑284 (MQ=255)
                                                                         ctGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAATCGTTCCTCGCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATagcag                                                                                                                                                                                                     <  1:1953185/286‑1 (MQ=255)
                                                                                     ggTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTAACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTgcg                                                                                                                                                                                        <  1:1732423/288‑1 (MQ=255)
                                                                                      gTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACCCTCACCAGACAGCAGAGCAGCAATTgcgca                                                                                                                                                                                      >  2:362211/1‑288 (MQ=255)
                                                                                      gTAAGTATTAGCTTATTTTTTCGAGCATTAATCACGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGCGTGGCGAGTAATTTGCGAAACCACCCGATAACGGATCGGCGGTGTTCTCACGATACCGAACCTCTCACCCGCTag                                                                                                                                                                                                        >  2:830296/1‑271 (MQ=255)
                                                                                        aaGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTg                                                                                                                                                                                     >  1:1353779/1‑288 (MQ=255)
                                                                                        aaGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTg                                                                                                                                                                                     <  1:1248846/288‑1 (MQ=255)
                                                                                                gCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGtt                                                                                                                                                                               >  1:1587787/1‑286 (MQ=255)
                                                                                                gCTTATTTTTTCGAGCATTAATCACGCGCGTAATCACAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTAAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCTAGTAATTTGCGACACCACCCGATAACGGAGAGGCGGTGTTCTCACGATCCCGACACTCTCACAAGACAGTAGCCCAGCAATTGCGCTAGCAAtt                                                                                                                                                                               >  1:1807701/1‑286 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATGCCGAAACCCCCACCAGATAGCAGCCAAGCAATTCCCCTGGCCGTTACCGCaa                                                                                                                                                                        >  2:1957588/1‑288 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCAc                                                                                                                                                                                                               <  1:560553/249‑1 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTgcg                                                                                                                                                                                        >  1:845457/1‑272 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCaa                                                                                                                                                                        >  1:1380074/1‑288 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCaa                                                                                                                                                                        >  2:1696082/1‑288 (MQ=255)
                                                                                                     ttttttCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCATCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTAACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGCGTTCTCACGATACCGACACACTCACCAGATAGCAGCGCAGCAATCGCGCTGGCAGTTACTGCaaa                                                                                                                                                                       >  1:900367/1‑289 (MQ=255)
                                                                                                          tCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGc                                                                                                                                                                  >  1:1702660/1‑289 (MQ=255)
                                                                                                                    aTCCCGCGCATAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGtt                                                                                                                                                        <  1:1432337/289‑1 (MQ=255)
                                                                                                                          cgcgTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAgcggcg                                                                                                                                                                                                                                          >  2:690717/1‑201 (MQ=255)
                                                                                                                                  cccAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCa                                                                                                                                          <  2:1353779/289‑1 (MQ=255)
                                                                                                                                     aaCGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAAc                                                                                                                                        >  1:550955/1‑288 (MQ=255)
                                                                                                                                           aCCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTg                                                                                                                                  >  1:331108/1‑288 (MQ=255)
                                                                                                                                               aCGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAg                                                                                                                             <  1:1530060/289‑1 (MQ=255)
                                                                                                                                                    ttAGGGAGTAACCCAATCTCTACATCATGGGGTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAAGTGCGCTGGCAGGTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCa                                                                                                                        <  2:1254975/289‑1 (MQ=255)
                                                                                                                                                    ttAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTTCGCTGGCAGTTACTGCACACTGGCGAAGATCGTTTTGCCCCAAGGGCAACGCTTTGCCAAGTTCCa                                                                                                                        >  1:631255/1‑289 (MQ=255)
                                                                                                                                                    ttAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTTCCCAAAGGGCAACGCTTTGCCAAGTTcc                                                                                                                         >  1:1001010/1‑288 (MQ=255)
                                                                                                                                                    ttAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCa                                                                                                                        <  2:1587787/289‑1 (MQ=255)
                                                                                                                                                        ggAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGTCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAACTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGt                                                                                                                    >  2:324487/1‑289 (MQ=255)
                                                                                                                                                            tAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCa                                                                                                                                                                                                                                 >  2:1751862/1‑176 (MQ=255)
                                                                                                                                                            tAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCa                                                                                                                                                                                                                                 <  1:1751862/176‑1 (MQ=255)
                                                                                                                                                             aaCACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGGAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAg                                                                                                                >  2:1312941/1‑288 (MQ=255)
                                                                                                                                                             aaCACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAg                                                                                                                >  1:515503/1‑288 (MQ=255)
                                                                                                                                                                       ctACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGcc                                                                                                     >  1:1968923/1‑289 (MQ=255)
                                                                                                                                                                        tACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAgcggcg                                                                                                                                                                                                                                          >  2:1420086/1‑155 (MQ=255)
                                                                                                                                                                        tACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCa                                                                                                    >  1:311059/1‑289 (MQ=255)
                                                                                                                                                                        tACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCa                                                                                                    >  2:53279/1‑289 (MQ=255)
                                                                                                                                                                          catcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCaaa                                                                                                  >  1:1641605/1‑289 (MQ=255)
                                                                                                                                                                          catcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCaaa                                                                                                  >  2:425492/1‑289 (MQ=255)
                                                                                                                                                                          catcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCaaa                                                                                                  >  1:1514129/1‑289 (MQ=255)
                                                                                                                                                                            tcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCa                                                                                                                        >  2:940511/1‑265 (MQ=255)
                                                                                                                                                                            tcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCa                                                                                                                        <  1:940511/265‑1 (MQ=255)
                                                                                                                                                                            tcatGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAAt                                                                                                >  2:75991/1‑289 (MQ=255)
                                                                                                                                                                             catGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTa                                                                                                                   >  2:602780/1‑269 (MQ=255)
                                                                                                                                                                              ttGGGTT‑CGGTAAATCGTTCTTACCCGTTCTCGGCCAACAATGTTCCTTTCACAGACGGCGTAAAATTCAGCGTGTTACTTGCCATATGAATTTCGAAGAGCGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATACCGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTc                                                                                             <  2:911408/288‑1 (MQ=255)
                                                                                                                                                                               tGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGCTAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGAGCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGGTTCCAGGCCCG‑GCGCCcaaaaagc                                                                                             >  2:1828736/1‑284 (MQ=255)
                                                                                                                                                                               tGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGcc                                                                                                                                <  1:1194734/254‑1 (MQ=255)
                                                                                                                                                                               tGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGcc                                                                                                                                >  2:1194734/1‑254 (MQ=255)
                                                                                                                                                                               tGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTc                                                                                             <  2:1849712/289‑1 (MQ=255)
                                                                                                                                                                               tGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGCCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCACAGGGCAACGCTTTGCCAAGTTCCATCTTACAGGCCCGCCCGCAaaaactc                                                                                              >  2:570154/1‑285 (MQ=255)
                                                                                                                                                                                    tACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGgc                                                                                         >  2:1552420/1‑288 (MQ=255)
                                                                                                                                                                                    tACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGgc                                                                                         >  1:1883995/1‑288 (MQ=255)
                                                                                                                                                                                    tACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGgc                                                                                         >  1:1931985/1‑288 (MQ=255)
                                                                                                                                                                                      cGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAg                                                                                                                             >  2:1257225/1‑250 (MQ=255)
                                                                                                                                                                                      cGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCCGCGCGCCAAAATGTCTGgc                                                                                         >  1:971530/1‑286 (MQ=255)
                                                                                                                                                                                         tAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACGTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTCGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGa                                                                                    <  2:854135/288‑1 (MQ=255)
                                                                                                                                                                                          aaaaCGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaa                                                                                   <  1:1858570/288‑1 (MQ=255)
                                                                                                                                                                                          aaaaCGTTCCGCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCCCTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaaa                                                                                  <  1:740884/289‑1 (MQ=255)
                                                                                                                                                                                          aaaaCCTTCCTGCCCGTCCATGGCCAGAGATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCAGTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCGCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaaa                                                                                  <  2:1807701/289‑1 (MQ=255)
                                                                                                                                                                                                      tcCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTa                                                                      <  1:1834600/289‑1 (MQ=255)
                                                                                                                                                                                                           ccTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTaccacc                                                                 <  1:1441243/289‑1 (MQ=255)
                                                                                                                                                                                                             tGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTacca                                                                   >  1:264833/1‑285 (MQ=255)
                                                                                                                                                                                                             tGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTacca                                                                   <  2:264833/285‑1 (MQ=255)
                                                                                                                                                                                                             tGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTac                                                                     >  1:37170/1‑283 (MQ=255)
                                                                                                                                                                                                              gcgcCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAgg                                                              <  2:1716782/289‑1 (MQ=255)
                                                                                                                                                                                                               cgcCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGt                                                             >  1:1308663/1‑289 (MQ=255)
                                                                                                                                                                                                                  cAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTcc                                                          <  1:1224625/289‑1 (MQ=255)
                                                                                                                                                                                                                    gCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTAAAGGCCAGCCGGCCAAAATGTCTGGAGCTGAACTGGGGAAATGTACCAACGAGTTccag                                                        >  2:473318/1‑287 (MQ=255)
                                                                                                                                                                                                                      aaTGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCt                                                         <  2:1883995/286‑1 (MQ=255)
                                                                                                                                                                                                                          ttCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaa                                                                                   >  1:1565932/1‑256 (MQ=255)
                                                                                                                                                                                                                                tctcAAACGGCATAAAATTCAGCGGGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCCGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAg                                            <  1:473318/289‑1 (MQ=255)
                                                                                                                                                                                                                                 ctcAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAgc                                           <  1:115764/289‑1 (MQ=255)
                                                                                                                                                                                                                                      aCGGCATAAAATTCAGCTTTTCACTTGCCATATGCATTTCGGAGGACGGCGAGTGGCGAGTAATTTTCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTc                                      <  1:1536422/289‑1 (MQ=255)
                                                                                                                                                                                                                                          cATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAAACCCCGCCCCTccca                                   >  2:1504558/1‑286 (MQ=255)
                                                                                                                                                                                                                                              aaaTTAGGCGGGTCACTTGCCAATGGCATTTCGAAGGACGGCGAGGGGCGAGTAATTTGGGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCccg                              <  2:1443639/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aaTTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCccgc                             <  1:491579/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         gtCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaaa                                                                                  >  1:682765/1‑226 (MQ=255)
                                                                                                                                                                                                                                                         gtCACTTGCCATATGCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaaa                                                                                  <  2:682765/226‑1 (MQ=255)
                                                                                                                                                                                                                                                         aggacaggcccttggCATTTCGCAGGACGGGGGTTGGCGAGGAATTTGCCAAACCGCCCGATAACGGAGCGCCGGTGTTCTCACGAGACCGACCCGCTCACCAGATAGCAGCGCAGCAATTGGGCGCGCAGTTACTGCAAACGGGCGAAGATCGTTTTGCCCAAAGGGCAGCGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCGGGCGGTGAAATGGTTAAACGGACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGc                   <  2:879361/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                    taagCATTTGAAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAAGGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGaaa        <  2:1212525/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gCATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAAtt      >  1:109205/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        cATTTCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTtc    <  2:1240829/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          tttCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTtctc  >  1:1270282/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ttCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAACTGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCACAAACTtccc  >  2:1608296/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                           ttCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGaa         >  1:879361/1‑281 (MQ=255)
                                                                                                                                                                                                                                                                           ttCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTtctc  >  2:779628/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           ttCGAAGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTtctc  >  1:696429/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                aGGACGGCGAGTGGCGAGTAATTTGCGAAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGaaa                                                                                  <  1:1683598/203‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                 
CTGGTGATAAATAAAGCAAATAACCAGGATTAATCTGTATTAATTTATAAGAAAGCAACTTAATACCCGCAGAATGATTTCTGCGGGTAAGTATTAGCTTATTTTTTCGAGCATTAATCCCGCGCGTAATCCCAACGCTACCAACGGATTAGGGAATAACACATACTCTACATCATGGGTTACGGTAAAACGTTCCTCTCCGTCCTGCGCCAGCAATGTTCCTTTCTCAAACGGCATAAAATTCAGCGTGTCACTTGCCATATGCATTTCGAAGGACGGGCTGTGGCGAGTAATTTGGCTAACCACCCGATAACGGAGCGGCGGTGTTCTCACGATACCGACACTCTCACCAGATAGCAGCGCAGCAATTGCGCTGGCAGTTACTGCAAACTGGCGAAGATCGTTTTGCCCAAAGGGCAACGCTTTGCCAAGTTCCAGCGTACAGGCCAGCGCGCCAAAATGTCTGGCGCTGAAATGGGTAAACGTACCACCAGGTTCCTGATGGAACACCAGCGCCTCCAGCCCCGCCGCACCCAGCCACGTCAGAAATTTCTC  >  CP042583/1507854‑1508408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A