Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,559,185 |
6 bp→TCGTCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,559,185 | 0 | A | T | 98.7%
| 515.5
/ ‑5.5
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/1); major base T (99/120); minor base C (2/1); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 5.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,559,186 | 0 | G | C | 97.8%
| 506.4
/ NA
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/3); new base C (99/119); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,559,187 | 0 | C | G | 97.8%
| 520.3
/ ‑6.0
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (99/119); minor base T (2/3); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,559,188 | 0 | A | T | 99.1%
| 520.9
/ ‑4.7
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (100/120); minor base C (0/2); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,559,189 | 0 | G | C | 97.8%
| 503.5
/ ‑5.1
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/3); new base C (99/118); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,559,190 | 0 | C | G | 98.6%
| 512.8
/ NA
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (3/0); new base G (97/120); total (102/122) |
| Fisher's exact test for biased strand distribution p-value = 9.24e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 224 total aligned reads displayed.
GGGCTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTAGTCTAAACAACGAGAATGCGGATATT‑AGCAGC‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCG > CP042583/1558918‑1559459
||||||
gggCTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTc < 1:389680/289‑1 (MQ=255)
cTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTcagc > 1:1592544/1‑289 (MQ=255)
cGAATCGGCGGGCTATTTTTAAAAATCTGACTAAACTGTTTTCCCGCGCCCTGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATACCTTCTAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTTGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAgcagca < 1:1371309/289‑1 (MQ=255)
cGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAgcagca < 2:375811/289‑1 (MQ=255)
ggcgggcgATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACg < 1:269687/289‑1 (MQ=255)
gATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGaa < 2:342472/289‑1 (MQ=255)
gATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGaa < 1:293018/289‑1 (MQ=255)
gATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGaa < 2:1061982/289‑1 (MQ=255)
gATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGaa < 1:657544/289‑1 (MQ=255)
tttttGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAata < 1:751875/289‑1 (MQ=255)
tttttGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAata < 1:1109341/289‑1 (MQ=255)
ttttGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAatat < 2:1597786/289‑1 (MQ=255)
aTCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAgg < 2:69903/289‑1 (MQ=255)
aTCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAgg < 1:1808091/289‑1 (MQ=255)
cgacACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATg < 1:1330821/288‑1 (MQ=255)
cgacACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATg < 1:931333/288‑1 (MQ=255)
accgtttttCCCTCGCCCGGAACTTTACCCAAAAATTAATGTTGCCTTTTATCG‑TTTTGATAAACTCAAATTTATCCAATGTTCGTTTTGGTCATAATATGGGCGTTTTGTTTCCCATTCAGGTTGGCGGCCGCCTTAATACGCTCAGGCAAAATGGCGAATTAATTGGTCGTCTCGGCGTTGTTGAG‑TTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt < 2:1102912/284‑1 (MQ=255)
accgTTTTCCCTCGCCCGGCATCTTAACCATTAGTTAATGTTCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt < 2:155185/286‑1 (MQ=255)
acTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAACTACGTGGCGAATCTCACTTAGGTGATGTTGAt > 2:1763356/1‑289 (MQ=255)
acTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt < 2:1239189/289‑1 (MQ=255)
acTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt < 1:424678/289‑1 (MQ=255)
ccTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGtattat > 2:56434/1‑289 (MQ=255)
tCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATcc < 1:134284/289‑1 (MQ=255)
cccGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCTAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCgg > 1:1204523/1‑289 (MQ=255)
cccGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATg > 1:778053/1‑270 (MQ=255)
cccGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTAATTTATATTATCCggg > 2:1784497/1‑289 (MQ=255)
cATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGcc < 1:694661/288‑1 (MQ=255)
tAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGTCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGcc < 2:36347/283‑1 (MQ=255)
caggaGATAATGGTCGCGTTGATCGGTTGGTGTAACTTGAAAGTAAG‑AGGTGATCGTATTGGTCAGAATAGTGGCGAGCTGTGTCTCATTCAGGTTGGCGGGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGc < 2:1251748/284‑1 (MQ=255)
cATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCa < 2:1921235/289‑1 (MQ=255)
aaGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATcc < 2:1359236/269‑1 (MQ=255)
aaGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCAtag > 2:579719/1‑289 (MQ=255)
aaTGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGaa > 1:1466002/1‑289 (MQ=255)
tGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt > 2:890271/1‑251 (MQ=255)
tGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGAt < 1:890271/251‑1 (MQ=255)
tGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGt < 1:1489300/289‑1 (MQ=255)
tGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGt < 1:56434/289‑1 (MQ=255)
gATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTc < 1:1684548/289‑1 (MQ=255)
cgTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGAt > 1:1438775/1‑287 (MQ=255)
cgTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGAt > 1:1159628/1‑287 (MQ=255)
cgTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGAt > 1:1766444/1‑287 (MQ=255)
tCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAaac < 1:1728157/289‑1 (MQ=255)
gATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAaacaa < 2:680162/289‑1 (MQ=255)
tCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAAcc < 2:81033/289‑1 (MQ=255)
tCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATAACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAAAAAcc > 1:1140585/1‑289 (MQ=255)
cTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGAc > 2:521223/1‑289 (MQ=255)
ttCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACa > 2:280890/1‑289 (MQ=255)
ttCAAAATAAT‑CAATGATCGTTTTGGTCATAAGAGTGTGGATCTGTTTCTCATTCAGGTTGGCAAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGCGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACa < 2:778529/289‑1 (MQ=255)
gtCAAATTACA‑CTATGATCGTTTTGGTCATAATAGTGGCGATCTGGTTCTCATTCAGGTTGGCGAGCGCCTGCATACGCTCCAGCAAGATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACa < 2:1133440/288‑1 (MQ=255)
aaTTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTcagcag < 2:736303/185‑1 (MQ=255)
aaTTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATA‑T‑ATCGTCGCTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCAAGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTg > 2:512287/1‑288 (MQ=255)
aaTTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGACGAAGTTATTGGTCGTCTCGGCGGTGATGTGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTg > 1:1989680/1‑288 (MQ=255)
t‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTTCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCa > 2:1580111/1‑289 (MQ=255)
t‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCa > 2:1483485/1‑289 (MQ=255)
ggTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATAtt > 1:1083500/1‑288 (MQ=255)
cATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCTAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGa < 2:1204523/289‑1 (MQ=255)
aataGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGt > 1:591292/1‑289 (MQ=255)
tGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACa < 2:1432007/254‑1 (MQ=255)
tGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAg > 2:1687208/1‑289 (MQ=255)
ggCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAgg < 1:963692/289‑1 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGga < 2:1832946/161‑1 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGaa < 2:1448885/164‑1 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAat < 1:1950414/165‑1 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAat > 2:1950414/1‑165 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCGCTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCCAAGCAGGAAGTACCCTGCATGCTGCACATGTTGCGATGTATCGGGAGaa > 2:1279790/1‑289 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATcc < 2:1406943/196‑1 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGaa > 1:250760/1‑289 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGaa > 2:1439732/1‑289 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGaa > 1:921229/1‑289 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGaa > 1:1609438/1‑289 (MQ=255)
aTCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGaa > 1:998206/1‑289 (MQ=255)
cgcCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGc < 1:1975513/248‑1 (MQ=255)
cgcCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGc > 2:1975513/1‑248 (MQ=255)
gcCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGc < 1:1650357/247‑1 (MQ=255)
gcCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTg > 1:1232693/1‑288 (MQ=255)
tCCAGCAAACTGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATCTT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGAGGGATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCCCATCCac > 2:1162244/1‑287 (MQ=255)
tCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCtttt < 1:623008/275‑1 (MQ=255)
tCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACATTTTGTCGCGCATCCAgc > 1:1522810/1‑289 (MQ=255)
tCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCGGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACCCCTTTTATCGCACATTCatc > 2:1178705/1‑287 (MQ=255)
ccAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAgcg < 2:839676/289‑1 (MQ=255)
aGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCt > 1:50508/1‑289 (MQ=255)
aaaaTGGCGAAGTTATTGTGCGTTCCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTa < 2:1842668/287‑1 (MQ=255)
tGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGGCCATCCAGCTCTACAtt > 2:1675936/1‑287 (MQ=255)
tGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACAAAAACAAAAAACACCATTTGTCGCGCAAcctctgcacttaaac > 2:623008/1‑276 (MQ=255)
gggAACTTATGGGTCGTCTGGGAGGGGATGAGTTTGTAGGTGTTTAACTCAACAACGAGAATGCGGACATT‑TCGTCG‑CTGAGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATCTCGACTTTTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAAAAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAAAAGAAAACACCATTCGTCGAGCATCCAGCGCTACATTCCt < 2:851711/286‑1 (MQ=255)
gAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAg < 1:731651/289‑1 (MQ=255)
aaGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAg < 2:921229/288‑1 (MQ=255)
atgtcttGGTCGGTTCGGCGGTGATGAGTTTTTAGTTGTTTAACTAAACAACGAGAATGCGGATATT‑TCTTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGc < 2:978344/284‑1 (MQ=255)
tcgtcTCGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTcac < 1:142208/288‑1 (MQ=255)
cgtcTCGGCGGTGATGAGTTTTTAGTTGTTGCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATGTCAGTTGGGTGATGTTGATTTGTATTATCCCGGTGCCAGTTTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTcaca < 1:1246600/288‑1 (MQ=255)
tctcGGCGGTGATGAGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACAt > 1:281911/1‑287 (MQ=255)
ggTGATGGGTTTTTAGTTGTTACACTAAACAACGAGAATGCGGATATTGAGTCG‑‑CGGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGa < 2:871292/288‑1 (MQ=255)
atgaGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAaacaa > 1:1008022/1‑159 (MQ=255)
atgaGTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGt > 1:866072/1‑289 (MQ=255)
gTTTTTAGTTGTTTCACTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGAt < 1:373798/288‑1 (MQ=255)
gtttcacTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAAt < 1:1439732/283‑1 (MQ=255)
tttcacTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTcgc > 2:1026249/6‑226 (MQ=255)
tttcacTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTcgc < 1:1026249/221‑1 (MQ=255)
tttcacTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATc > 1:1377581/6‑289 (MQ=255)
cacTAAACAACGAGAATGCGGATATT‑TCGTCG‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAgg < 1:1935025/245‑1 (MQ=255)
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GGGCTACCGAATCGGCGGGCGATTTTTGAAAATCTGACGACACTGTTTTCCCTCGCCCGGCATCTTAACCATAAGATAATGATCGCGTTTATCGATCTGGATAACTTCAAATTAAT‑CAATGATCGTTTTGGTCATAATAGTGGCGATCTGTTTCTCATTCAGGTTGGCGAGCGCCTTAATACGCTCCAGCAAAATGGCGAAGTTATTGGTCGTCTCGGCGGTGATGAGTTTTTAGTTGTTAGTCTAAACAACGAGAATGCGGATATT‑AGCAGC‑CTGCGAGAACGCATTCAGCAGCAAATACGTGGAGAATATCACTTAGGTGATGTTGATTTGTATTATCCCGGTGCCAGTCTTGGCATAGTAGAAGTCGATCCTGAAACAACCGATGCAGACAGTGCCCTGCATGCTGCCGATATTGCGATGTATCAGGAGAAAAAACACAAACAGAAAACACCTTTTGTCGCGCATCCAGCGCTACATTCCTGAGGCGTATTCACATCCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCG > CP042583/1558918‑1559459
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
