Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,578,153 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,578,1530AT99.5% 497.4 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (82/131);  minor base C (1/0);  total (83/131)
Fisher's exact test for biased strand distribution p-value = 3.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,578,1540GC99.5% 495.6 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (83/130);  minor base A (0/1);  total (83/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,578,1550CG99.5% 494.3 / NA 214intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (83/129);  total (83/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 214 total aligned reads displayed.

ACGTCTGCTGCTGGCACAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATAGCCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTCG  >  CP042583/1577876‑1578433
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
aCGTCTGCTGCTGGCACAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTgg                                                                                                                                                                                                                                                                                 <  1:1993147/288‑1 (MQ=255)
    ctgctgctgGCTCAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCg                                                                                                                                                                                                                                                                            <  1:1679582/289‑1 (MQ=255)
          ctgGCACAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑c                                                                                                                                                                                                                                                                     >  1:564420/1‑289 (MQ=255)
          ctgGCACAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑c                                                                                                                                                                                                                                                                     >  1:1760852/1‑289 (MQ=255)
               acaGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATACCGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaa                                                                                                                                                                                                                                                                 <  1:1920688/288‑1 (MQ=255)
               acaGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaac                                                                                                                                                                                                                                                                >  1:1766929/1‑289 (MQ=255)
                 agtgccggccatgtgTGGATTCCCCGCGACGA‑AACGGGATGCGTTTTCATACCGGGAACAGGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACTGCGAGGAAGTCGTCTACAGCAAAACTGAGGATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACCCTTTGGTCAGGATGCTGCCAACGAAGGAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaacga                                                                                                                                                                                                                                                              <  2:267973/275‑1 (MQ=255)
                    gACGTCATGAAGTGGATTACCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCTTCTACAGCAAAACTTATTATTCCATCGGCGGCGGCTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaacgaac                                                                                                                                                                                                                                                            <  1:1420380/288‑1 (MQ=255)
                    gACGGCATGGAGTGGATGTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaacgaac                                                                                                                                                                                                                                                            <  2:1624809/288‑1 (MQ=255)
                       ggCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGACCTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGgc                                                                                                                                                                                                                                                        >  2:1815795/1‑289 (MQ=255)
                        gCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGgc                                                                                                                                                                                                                                                        >  2:1124352/1‑288 (MQ=255)
                        gCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTACAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGgc                                                                                                                                                                                                                                                        >  1:213284/1‑288 (MQ=255)
                         cATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGgcg                                                                                                                                                                                                                                                       <  2:1199993/288‑1 (MQ=255)
                             aaGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGc                                                                                                                                                                                                                                                   >  2:1438761/1‑288 (MQ=255)
                              aGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCAGCGCCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGCAGTCAGCGTGCCGTATCAGTTCAAATCTGCCACCGAACCGCCCGCGCACTATAATGCAACCGGCCATCCGTTGTCTGG‑CTCCGCATGCCACAACGACCCGGCGCTGca                                                                                                                                                                                                                                                  >  2:1964307/1‑288 (MQ=255)
                                 ggATTTCCCGCA‑CGAAAACGGGATGCGTTTTCATAACGGCAACCTGCCGGTGCATGAAAACGGTATGCAAATCCACGCCTATAGCGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTGTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGc                                                                                                                                                                                                                                              <  2:1486218/289‑1 (MQ=255)
                                      tCCCGGG‑CGACAACGGGTTGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCaagaa                                                                                                                                                                                                                                         <  1:967074/289‑1 (MQ=255)
                                                         tGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTCTCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGCTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCCAGAAAGAGATCGACGAGTAtt                                                                                                                                                                                                                        >  1:1296233/1‑288 (MQ=255)
                                                            gTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTcgc                                                                                                                                                                                                                    <  1:1483438/289‑1 (MQ=255)
                                                             ttttCATACCGCCAGAGTTCCGCTGAATGAAAGCGGTATGCAAATCCACGCCTATAACGGCGCTGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCGGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTcgcg                                                                                                                                                                                                                   <  2:1893690/289‑1 (MQ=255)
                                                                  aTAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATg                                                                                                                                                                                                               >  1:1271964/1‑288 (MQ=255)
                                                                     aCGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTg                                                                                                                                                                                                           <  1:1668905/289‑1 (MQ=255)
                                                                     aCGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTg                                                                                                                                                                                                           >  2:397674/1‑289 (MQ=255)
                                                                        gCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCa                                                                                                                                                                                                        >  2:136235/1‑289 (MQ=255)
                                                                          aaacTGCCGAGGCATTCAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTTCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCGGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCaaa                                                                                                                                                                                                      <  2:824379/286‑1 (MQ=255)
                                                                          aaCCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCaaa                                                                                                                                                                                                      <  1:1124352/289‑1 (MQ=255)
                                                                          aaCCCGCCGCGCCATGCAAACGATTTTGAATACCACGCCTTAAACGGCGATGAAGTCCTCTACAGCAAAACTTATTATGCCAGCGGCGGCGTTTTTAGCGTCGATGAATAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCaaa                                                                                                                                                                                                      <  2:1679602/289‑1 (MQ=255)
                                                                          aaCCAGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAAAGGCGATAAAGTCGTCTACAGCAAAACTTATTATTCCCTCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCaaa                                                                                                                                                                                                      <  1:617894/289‑1 (MQ=255)
                                                                           aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGAATGTCTGGCaaa                                                                                                                                                                                                      >  2:74071/1‑288 (MQ=255)
                                                                            acTGCCGCGGCATGAAAACGGTATGCAAATCCACGCCTATAACTGCGATGAAGTCGTCTACAGCACAACTTATTATGCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CATAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCaaa                                                                                                                                                                                                      <  2:1517603/286‑1 (MQ=255)
                                                                               gCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATg                                                                                                                                                                                                 <  1:647576/289‑1 (MQ=255)
                                                                                 cGCTGCATGAACACGGAATGAAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTGCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCa                                                                                                                                                                                               <  2:1172605/289‑1 (MQ=255)
                                                                                 cGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGc                                                                                                                                                                                                <  1:685200/288‑1 (MQ=255)
                                                                                    tGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCa                                                                                                                                                                                               <  2:1766780/286‑1 (MQ=255)
                                                                                    tGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAgg                                                                                                                                                                                             <  1:1180061/288‑1 (MQ=255)
                                                                                               ggTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTatcgatc                                                                                                                                                                                 <  1:310572/289‑1 (MQ=255)
                                                                                                gTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTatcgatc                                                                                                                                                                                 >  1:156132/1‑288 (MQ=255)
                                                                                                 tATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATcgc                                                                                                                                                                               >  1:133044/1‑289 (MQ=255)
                                                                                                         tCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATg                                                                                                                                                                                                 >  1:748497/1‑263 (MQ=255)
                                                                                                           cACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCG‑CGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCCCCGGTCTGGCAAACCATGAAGGCTTCTaacgatcttgttcttataac                                                                                                                                                                    >  2:1842324/1‑276 (MQ=255)
                                                                                                            aCGCCTATACAGGCGATGAAGTCGTCTACAGGAAAACTTATTATTCCATCGGCGGCGGGTTTATCGTCGATGAAGAACACTGTGGTCCGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAGCCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAacac                                                                                                                                                                    <  2:721291/289‑1 (MQ=255)
                                                                                                            aCGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAacac                                                                                                                                                                    <  2:1271964/289‑1 (MQ=255)
                                                                                                            aCGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAacac                                                                                                                                                                    <  2:133044/289‑1 (MQ=255)
                                                                                                             cGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCACATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACAcc                                                                                                                                                                   >  2:134839/1‑289 (MQ=255)
                                                                                                              gCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTgg                                                                                                                                                                                                                                                                                 >  2:1067118/1‑179 (MQ=255)
                                                                                                                   taACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaacgaac                                                                                                                                                                                                                                                            >  1:1237154/1‑194 (MQ=255)
                                                                                                                   taACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAgaacgaac                                                                                                                                                                                                                                                            <  2:1237154/194‑1 (MQ=255)
                                                                                                                        gCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGgtgt                                                                                                                                                           >  1:1325300/1‑286 (MQ=255)
                                                                                                                          gATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATg                                                                                                                                                                                                 <  1:1048546/246‑1 (MQ=255)
                                                                                                                          gATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGc                                                                                                                                                      <  1:1575738/289‑1 (MQ=255)
                                                                                                                            tGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCgcgc                                                                                                                                                                                                                  >  2:1801009/1‑227 (MQ=255)
                                                                                                                                   gtcTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCg                                                                                                                                              >  1:1059880/1‑288 (MQ=255)
                                                                                                                                      tACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTgc                                                                                                                                          <  1:455480/289‑1 (MQ=255)
                                                                                                                                      tACAGCAAAACTTATGATTCCATCGACGGCGGTTTAATCGGCGATGAGGAACCCTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTgc                                                                                                                                          <  2:1883118/289‑1 (MQ=255)
                                                                                                                                            aaaaCTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGc                                                                                                                                    <  1:1438761/289‑1 (MQ=255)
                                                                                                                                                   attattCCCGCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATTCGCCCAACGAAGTAAGCGTGCCGTATCCTTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCAcgtcg                                                                                                                             <  1:1468427/289‑1 (MQ=255)
                                                                                                                                                   attattCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCAcgtcg                                                                                                                             <  1:397674/289‑1 (MQ=255)
                                                                                                                                                           aTCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCt                                                                                                                      >  1:1897982/1‑288 (MQ=255)
                                                                                                                                                                      ttttATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCgg                                                                                                          <  2:156132/289‑1 (MQ=255)
                                                                                                                                                                                gATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGtt                                                                                                 >  1:69085/1‑288 (MQ=255)
                                                                                                                                                                                  tGAAGAACATTTTGGTTAGGATGCTGCAAACGACGTAAGCGTGCCGTATCCGTTCAAATCGGCCACCGAACTGCTCGAGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCAGGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTc                                                                                               <  2:1581799/288‑1 (MQ=255)
                                                                                                                                                                                           cTTTGGTCAGGATGCTGCCTACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCCCCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATaaa                                                                                     <  1:283636/289‑1 (MQ=255)
                                                                                                                                                                                           cTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATaaa                                                                                     <  1:710371/289‑1 (MQ=255)
                                                                                                                                                                                            ggtgggcagtgtggtgcAAACGAAGTAAGCTGGCAGTATTCGCTCAAATCTGCCACCGAACTGCTCGAGTACTGGAAGGAAACGGGGTATTCGCTGTCTGGTCTCGCTATG‑GAGAACGAACGGGCGCGGCACGGCAAGAAAGAGATCGGCGGGTAGTTCGCGCATGTCTGGCAAACCAGGCAGGGAGGTATCGATCGCGGGATGAACTCCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCAGGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATaaa                                                                                     <  2:1856508/274‑1 (MQ=255)
                                                                                                                                                                                                   aGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATaaa                                                                                     <  2:59096/281‑1 (MQ=255)
                                                                                                                                                                                                   aGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATaaa                                                                                     >  1:59096/1‑281 (MQ=255)
                                                                                                                                                                                                      aTGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACg                                                                           <  1:1519906/288‑1 (MQ=255)
                                                                                                                                                                                                       tgctgcCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGAt                                                                         <  1:1808813/289‑1 (MQ=255)
                                                                                                                                                                                                          tgcCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATg                                                                                                                                                                                                 <  2:887070/166‑1 (MQ=255)
                                                                                                                                                                                                              caCGAAGTAAGCGTGCCGTTCCCGTTCAAATCGGCCCCCGAACTGCTGGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  2:1325300/288‑1 (MQ=255)
                                                                                                                                                                                                              aaCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  1:1264101/289‑1 (MQ=255)
                                                                                                                                                                                                              aaCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  1:1873740/289‑1 (MQ=255)
                                                                                                                                                                                                              aaCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  1:384420/289‑1 (MQ=255)
                                                                                                                                                                                                              aaCGAAGTAACCGTCCCGTATCCGTTCCAATCTGCCCCCGAACTGCCCCGGTACAGTAATGAAACCGCCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  1:1062897/289‑1 (MQ=255)
                                                                                                                                                                                                               aCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCAcgtcg                                                                                                                             >  2:1023737/1‑229 (MQ=255)
                                                                                                                                                                                                               aCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCAcgtcg                                                                                                                             <  1:1023737/229‑1 (MQ=255)
                                                                                                                                                                                                               aCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGaa                                                                 >  2:686231/1‑289 (MQ=255)
                                                                                                                                                                                                               aCGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  >  1:1228988/1‑288 (MQ=255)
                                                                                                                                                                                                                         cGTGCCTTATCCGTTCAAATCTGCCACCGAACGTGTCGCGAACGGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTGCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGAc                                                       <  2:1755647/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGa                                                        <  1:1832233/287‑1 (MQ=255)
                                                                                                                                                                                                                           tGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTg                                                     >  1:1893102/1‑289 (MQ=255)
                                                                                                                                                                                                                             ccGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTggg                                                   >  1:504907/1‑289 (MQ=255)
                                                                                                                                                                                                                                tATCCCTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTCTTCACTGTCTGGGTTCGCTAGA‑CAGAACGAACTGGCGCGGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTaa                                                <  2:786846/289‑1 (MQ=255)
                                                                                                                                                                                                                                      ttCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTatcgatc                                                                                                                                                                                 >  2:993572/1‑154 (MQ=255)
                                                                                                                                                                                                                                      ttCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACt                                                      <  1:1344336/277‑1 (MQ=255)
                                                                                                                                                                                                                                           aTCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAGGACAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCCGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGACAAACTGTCTAACGATCCGATTCATGTCATTGACTGGGTAAACATGTTTgc                                      >  1:796258/1‑288 (MQ=255)
                                                                                                                                                                                                                                                ccACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCa                                                                                                                                                                                               <  2:663536/130‑1 (MQ=255)
                                                                                                                                                                                                                                                ccACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTTCTCTGGc                                >  2:487242/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     gTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAAcgccg            >  1:1085469/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gTAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAAcgccg            >  1:847399/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      tAATGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACgccgcc          >  1:1836009/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aTGAAACCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCgg        <  1:1964307/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aaCCGGCTTTTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACCCCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCggtggt    <  1:1543105/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aaCCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCggtggt    <  1:1446632/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aCCGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTc   >  1:543867/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              ccGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGGGATCGACGAGTATTTCGCGCATATCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTgcgc                                    <  2:208042/255‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ccGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  >  1:1432190/1‑225 (MQ=255)
                                                                                                                                                                                                                                                                              ccGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  >  1:903960/1‑225 (MQ=255)
                                                                                                                                                                                                                                                                              ccGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGa                                                                  <  2:903960/225‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ccGGCTATTCGCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTCg  <  2:324694/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                       
ACGTCTGCTGCTGGCACAGGGACGGCATGAAGTGGATTTCCCGCG‑CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTGCCAACGAAGTAAGCGTGCCGTATCCGTTCAAATCTGCCACCGAACTGCTCGCGTACTGTAATGAAACCGGCTATAGCCTGTCTGGTCTCGCTATG‑CAGAACGAACTGGCGCTGCACAGCAAGAAAGAGATCGACGAGTATTTCGCGCATGTCTGGCAAACCATGCAGGCATGTATCGATCGCGGGATGAACACCGAAGGTGTACTGCCAGGCCCGCTGCGCGTGCCACGTCGTGCGTCTGCCCTGCGCCGGATGCTGGTTTCCAGCGATAAACTGTCTAACGATCCGATGAATGTCATTGACTGGGTAAACATGTTTGCGCTGGCAGTTAACGAAGAAAACGCCGCCGGTGGTCG  >  CP042583/1577876‑1578433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A