Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,599,648 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,599,648 | 0 | A | T | 99.5%
| 430.1
/ NA
| 188 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (80/106); total (82/106) |
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,599,649 | 0 | G | C | 98.9%
| 428.9
/ NA
| 188 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base C (78/106); total (82/106) |
| Fisher's exact test for biased strand distribution p-value = 1.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,599,650 | 0 | T | A | 98.9%
| 435.2
/ NA
| 188 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (80/106); minor base C (2/0); total (82/106) |
| Fisher's exact test for biased strand distribution p-value = 1.89e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 188 total aligned reads displayed.
CCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCAGTGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGAAGCGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCGCAACCTTCTG > CP042583/1599369‑1599929
|||
ccAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGa > 2:511820/1‑289 (MQ=255)
aaaaaGCACGGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATgg < 2:301917/289‑1 (MQ=255)
aaatGCACTGCAGCATGTACCTGAGGTTCTGACACTAACCCTTCCCACGACGGAAAGTTACGTTATTGATCCGGGTCAGCCGCTCATTCTTCCCGGCGTGCAGGTAGGCCTGGTTATCGATCGTACACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCCTCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGTGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGc < 2:458557/289‑1 (MQ=255)
tGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTAGCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGCGGCTCGCCCCTCAGAGTAGAACAATGGGGGGATGAGTGTTCTGCCtggg > 2:1446183/1‑288 (MQ=255)
gACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTCCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCGGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTTCCGTGCGAGAAAGGt > 2:1867142/1‑289 (MQ=255)
cctgaccGCGCCGGAAAGTTACGGTATTTATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGaaa < 1:1832960/289‑1 (MQ=255)
tgaccGCGCCGGAAAGTTACGTTATGGATGCGCGTCAGCCTCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGc < 1:1946671/289‑1 (MQ=255)
accGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGAt < 2:601568/251‑1 (MQ=255)
accGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCa > 1:197830/1‑289 (MQ=255)
ccGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGTGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAg < 1:1552551/289‑1 (MQ=255)
ccGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCa < 1:518050/288‑1 (MQ=255)
ccGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAg < 2:944823/289‑1 (MQ=255)
cgcCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCt < 2:1563879/288‑1 (MQ=255)
cgcCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTa > 2:1913660/1‑289 (MQ=255)
gcCGGAAAGTGACGGTGTTGAGTGGGGTCAGCGCGTCATTCTTCACGGCTGTCAGGAAGGCCGGGTTATCAGTCGGAACCTCACCGGC‑AGGGGGTCACCTTTGCCGTCGCAATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GGTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATGCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATc < 2:628051/289‑1 (MQ=255)
ataagtgacgggTATTGATGCGGGGCAGCCGCTCATTCTTCGCGGCGGGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGGGATGAAAGCCAGCTATCCa < 2:1215936/279‑1 (MQ=255)
gAAAGTTACGGGTTTGATGCGGGTCCGCCGCTCATTCTTACCGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCa < 2:812729/288‑1 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCGTCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAg > 1:259537/1‑289 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATgg > 2:1485392/1‑215 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATgg < 1:1485392/215‑1 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGAt < 1:509241/221‑1 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGGGATGAAAGCCAGCTATCCACTGTATGCCa > 1:1215936/1‑277 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGaaaaa > 2:1963013/1‑288 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGaaaaa > 1:108173/1‑288 (MQ=255)
ggTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCACCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAg > 2:353176/1‑289 (MQ=255)
gTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCACCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAg < 1:353176/288‑1 (MQ=255)
gcatagcttcACGGCGTGCAGGTAGGCCAGGTTATCGAACGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑gaga < 2:282153/283‑1 (MQ=255)
cTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑gaga < 1:1913660/289‑1 (MQ=255)
cTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑gaga > 2:1413473/1‑289 (MQ=255)
tCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGGTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGaa < 1:606478/289‑1 (MQ=255)
cATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAAc < 1:1952012/289‑1 (MQ=255)
cACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTa > 1:821687/1‑289 (MQ=255)
cACGGCGTGCAGGTAGGACAGGTTATCTATCGTAACCTCTCCAGCTAAGGCTTCACCTTTACCGTCGCCATGGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGGTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTa < 1:1116126/289‑1 (MQ=255)
gTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCAGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGAt < 1:1657651/288‑1 (MQ=255)
gCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTa < 2:221161/289‑1 (MQ=255)
cAGGAAGGCCAGGTTATCGATCGTAAACTCACCAGAAAAGGCGTCACCTTTACCGGCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTGGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTa < 1:1629450/288‑1 (MQ=255)
ccAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACcaca > 2:1802761/1‑289 (MQ=255)
ccAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTATCGGTGCCAGCGCGTGAGAATGGATCAATGGCGGGATGCGTATTCTGCCGGGCGATAAAGGTGAGTAGAAAACAGGCAATCCAACGTATGCGAATCTGGAAAAAGCGCGAG‑‑GAG‑ACAGCCTGAGGGAATTAcgccacaca > 2:1266878/1‑281 (MQ=255)
gTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCg > 2:488805/1‑289 (MQ=255)
ttATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAAcc < 1:1802761/287‑1 (MQ=255)
cgatcgTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑gag > 2:145768/1‑253 (MQ=255)
cgatcgTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑gag < 1:145768/253‑1 (MQ=255)
tcgTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGGCATCTGTCCTCCGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTAGATGTGTAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑t < 2:1641455/246‑1 (MQ=255)
gTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGc > 2:1976362/1‑167 (MQ=255)
aCCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCACTGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑CG‑‑GAGCACAGCCTTAGCGATTTACCCACCACAACCGCGAGTTTGAGTGCAgaga > 2:1754672/1‑289 (MQ=255)
aCCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCagag > 2:77110/1‑288 (MQ=255)
aCCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTAACAACCACAACCGTGAGTTTGAGTGCAgaga > 1:528433/1‑289 (MQ=255)
aCCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTAACCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACCGCCTTAGCGATTTACCCACCACAACCGGAAGTTTGAGTGAagag > 2:601906/1‑288 (MQ=255)
aCCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCGGGATGGC‑GTTGAGTTTCTCGGTGCCCGCGCCTCAGAATGGATAAATGGCGTGACACGTATTCTGCCGGGCGATTAAGGAGGGAGGAAAGCCAGCCATGCATTGTATGCCAATTTGGAAAAACCGC‑TG‑‑GAGAACAGCCTGAGCGCTTTACCCATCACAACCGTACGTCTGAGTgtctag > 2:1314062/1‑283 (MQ=255)
ttACCGTCGCCATCGAGCCTCAGCAGCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GGTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTgcaggc < 1:1769600/289‑1 (MQ=255)
tACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGaa < 2:301521/222‑1 (MQ=255)
ccGTCGCCATGAGGCCGCAGCATCGCTAACTGGTAAAAGGCGCTAGCAAATTTGTCGTCAACAGGCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGGTTCTCGGTGGCAGCGCCTCAGAATGGATACAGGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGGTGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGcaggcagg < 2:1827499/289‑1 (MQ=255)
ccGGCGCCATCGAGCCACAGCATCGCGAAATGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGGGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGcaggcagg < 2:259537/289‑1 (MQ=255)
cataagagacagAGCCTCAGCATCGCGAACTGGTAAAAGGAGATAGCAAATTTGTGGTCAACAGCGGTGTCGTGGTGAAGGTGGGGCTGGAGGGC‑GTTGATTTTCTGGGTGCCGGCGCCTCAGAATGGATCAATGGCGGGATACGTATTTTGCCGGGCGA‑AAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGcaggcagg < 1:661788/277‑1 (MQ=255)
cGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGGTAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCCCCACAACCGGGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCGGGCAGGatcg > 1:1179613/1‑286 (MQ=255)
gCCATCGGGCCGCAGCATCGCGAAATGGTAAAAGGCGATAGCAAATTTGTCGTCAACGGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcgg < 2:1145626/289‑5 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGATTGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACAGTATGCCAATTAGGAAACAGGGC‑TG‑‑GAGAACAGCCTTCGCGATTTACCCAGCACAACCGTGAGTTTGAGTGTAGAGACGCTGCCGGATGTccagcgcggcgcgg > 2:1769600/1‑279 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TGGAGAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatc > 2:645698/1‑287 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAAc > 1:1041696/1‑216 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAAc < 2:1041696/216‑1 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcgg < 1:1369959/289‑5 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcgg < 1:767958/289‑5 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAAAAGCCGTAGCGAGTTACCCCCCACAACCGTGTGTTTGATTGACGAGACGCTGCCGGATGTCCGTgcaggcaggc > 2:634614/1‑287 (MQ=255)
gCCATCGAGCCTCAGCATCGCGAAATGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGGTGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcgg < 1:227795/289‑5 (MQ=255)
aTCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcggtag < 1:1314062/289‑8 (MQ=255)
cGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCcaccac > 1:1034344/1‑234 (MQ=255)
cGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCcaccac < 2:1034344/234‑1 (MQ=255)
cGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTg < 1:178220/289‑1 (MQ=255)
gCCTCACCATCGCGAACTGTTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATTGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAATCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCt < 1:1266878/288‑1 (MQ=255)
aGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCg < 2:19905/289‑1 (MQ=255)
cgAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAAttt > 1:642101/1‑289 (MQ=255)
aaCTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGGAAATTTGa > 2:445911/1‑289 (MQ=255)
gTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATc < 1:1704571/154‑1 (MQ=255)
gTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATc > 2:1704571/1‑154 (MQ=255)
aaaaGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGt < 1:106001/289‑1 (MQ=255)
aaaaGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGt < 2:108173/289‑1 (MQ=255)
aaaaGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGt < 1:317926/289‑1 (MQ=255)
aaGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGa < 1:445911/289‑1 (MQ=255)
aaGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGa < 1:19945/289‑1 (MQ=255)
cGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAg < 1:294764/287‑1 (MQ=255)
aTAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTgcaggc > 2:1920305/1‑244 (MQ=255)
aTAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGcaggcagg < 1:272496/247‑1 (MQ=255)
tttGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGc < 1:1967397/289‑1 (MQ=255)
cgtcAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTcc < 1:590822/288‑1 (MQ=255)
cggttCGGTGTTAAGGTGGGGCTGGATGGG‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCTACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAAc < 1:29969/284‑1 (MQ=255)
cGTTTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAAc < 1:1867142/288‑1 (MQ=255)
gcgtgtgTAGGTGGGGCGGGATGGCGGTTGA‑TTTCTCGGTGCCAGCGCCTCAGAATGGTTCAATTGCGGGTGACGTATTCTGGCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTTTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCCGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGtt < 2:1170974/285‑1 (MQ=255)
cGATGTGAAGGTGGGTCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGACTCAGAATGGATCAATGGCGGGATACGTATTCGGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGtt < 1:1419771/288‑1 (MQ=255)
cGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGtt < 1:979797/288‑1 (MQ=255)
ggTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGTTGCCGGATGTGTAGGCAGGAGCGGTAGTGCTGTACCGCAAATCGGCAGTTGGTGAAGTGCTTACAGTTCGTCCGCGAGCTAACGAGTTTGATATCGa > 2:1667824/1‑288 (MQ=255)
gggCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTTCGTCCGCGAGCTAACGCGTTTGATatctatctt > 2:1407418/1‑287 (MQ=255)
gggCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGCGCAGGCAGGGTCGGTAGTGCTGTACCGTACATCTGGAGTGGGTGAAGTGATTACCGTGCGTCCGCGCGCTAACGCGTCTTGTATCGATCtcc > 2:1599228/1‑287 (MQ=255)
gggCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGAGACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTTTCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGGAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTg < 1:478501/288‑1 (MQ=255)
gCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGatcggta > 1:1408751/1‑205 (MQ=255)
tGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCata < 1:971377/288‑1 (MQ=255)
c‑GTTGAGTTTCTCGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCa < 2:733165/94‑1 (MQ=255)
ttCTCGGTGCCAGCGCCTCAGAATGGAGCAATGGCGGGATACGTATTCTGCCGGACGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGA‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCg < 1:1446183/289‑1 (MQ=255)
ctcGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCg < 2:329330/279‑1 (MQ=255)
ctcGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCg > 1:329330/1‑279 (MQ=255)
ctcGGTGCCAGCGCCTCAGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCGCa > 1:702763/1‑289 (MQ=255)
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CCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACGCTGACCCTGACCGCGCCGGAAAGTTACGGTATTGATGCGGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATCGATCGTAAACTCACCAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGCGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCAACAGCCGTGTCGATGTGAAGGTGGGGCTGGATGGC‑GTTGAGTTTCTCGGTGCCAGCGCCAGTGAATGGATCAATGGCGGGATACGTATTCTGCCGGGCGATAAAGGTGAGATGAAAGCCAGCTATCCACTGTATGCCAATTTGGAAAAAGCGC‑TG‑‑GAGAACAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGAAGCGTAGTGCTGTACCGTAAATTTGAAGTTGGTGAAGTGATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAGCCGGAGTATCGCAACCTTCTG > CP042583/1599369‑1599929
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A